SRR2934192.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934192.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	470220
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGC	3743	0.7960103781208795	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCG	3317	0.7054144868359491	No Hit
CCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTGC	2563	0.5450640125898515	No Hit
GAATCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTC	2223	0.4727574326910807	No Hit
CTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTGCT	1854	0.39428352685976775	Illumina Single End Adapter 1 (95% over 21bp)
GCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTGC	1683	0.35791757049891537	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTGTTCGTT	1412	0.30028497299136575	No Hit
TCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTGC	1395	0.2966696439964272	No Hit
CCTGTATCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTGC	1001	0.21287907787843988	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCT	852	0.18119178256986093	No Hit
GAATCAGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTC	739	0.15716047807409297	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTC	733	0.15588447960529114	No Hit
CTGTCACTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTGCT	663	0.14099783080260303	Illumina Single End Adapter 1 (95% over 21bp)
GCTGTATCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTGC	653	0.1388711666879333	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTA	583	0.1239845178852452	No Hit
TCCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTG	545	0.11590319424950024	No Hit
TCTGTATCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTGC	506	0.10760920420228828	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTAGAA	35	1.2098826E-7	45.000004	12
TCGATCA	70	0.0	45.000004	17
CGTTATT	65	0.0	45.000004	1
ACTACGG	75	0.0	45.000004	5
TAATAGA	25	3.887277E-5	45.0	39
TAATACG	110	0.0	45.0	4
TCGTTCA	25	3.887277E-5	45.0	16
GTCGATA	20	7.029031E-4	45.0	45
CGCGGAC	20	7.029031E-4	45.0	42
TCCGATT	20	7.029031E-4	45.0	45
TAGGTGC	25	3.887277E-5	45.0	25
ATTACGC	20	7.029031E-4	45.0	22
GTAGGTC	20	7.029031E-4	45.0	34
TACGGTA	20	7.029031E-4	45.0	30
TGCGGTA	20	7.029031E-4	45.0	16
CACGACC	45	3.8380676E-10	45.0	27
TAACGCG	20	7.029031E-4	45.0	26
TCGATGG	85	0.0	45.0	2
CGTTAGG	170	0.0	45.0	2
GCCTCTA	20	7.029031E-4	45.0	11