##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934190.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 431352 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.872477698028526 31.0 31.0 34.0 30.0 34.0 2 32.029602273781045 33.0 31.0 34.0 30.0 34.0 3 32.10619401324209 33.0 31.0 34.0 30.0 34.0 4 35.66377575622693 37.0 35.0 37.0 33.0 37.0 5 29.332883584636214 37.0 35.0 37.0 0.0 37.0 6 23.4926347855116 35.0 10.0 37.0 0.0 37.0 7 30.325330588475307 35.0 19.0 37.0 17.0 37.0 8 34.050017155362674 35.0 32.0 37.0 32.0 37.0 9 36.83140915076318 37.0 37.0 39.0 34.0 39.0 10 36.94982520076411 39.0 37.0 39.0 34.0 39.0 11 37.055064077597876 39.0 37.0 39.0 34.0 39.0 12 37.05654546634767 39.0 37.0 39.0 34.0 39.0 13 36.91983577217678 39.0 37.0 39.0 33.0 39.0 14 37.92891420464029 40.0 37.0 41.0 33.0 41.0 15 37.81262402863555 40.0 37.0 41.0 33.0 41.0 16 38.12307118084534 40.0 37.0 41.0 34.0 41.0 17 38.12080620931397 40.0 37.0 41.0 34.0 41.0 18 38.20675921289342 40.0 37.0 41.0 34.0 41.0 19 38.24961748177822 40.0 37.0 41.0 34.0 41.0 20 38.11475546653313 40.0 37.0 41.0 34.0 41.0 21 38.05843951111853 40.0 37.0 41.0 34.0 41.0 22 38.157071255030694 40.0 37.0 41.0 34.0 41.0 23 38.06066043509709 40.0 37.0 41.0 34.0 41.0 24 38.0599464010831 40.0 37.0 41.0 34.0 41.0 25 37.866658784473 40.0 36.0 41.0 34.0 41.0 26 37.77605065004915 40.0 36.0 41.0 33.0 41.0 27 36.89494658654649 39.0 36.0 41.0 32.0 41.0 28 37.279069066562805 39.0 36.0 41.0 32.0 41.0 29 37.619735158293 40.0 36.0 41.0 33.0 41.0 30 37.610719319720324 39.0 36.0 41.0 33.0 41.0 31 37.66954366735288 39.0 36.0 41.0 33.0 41.0 32 37.64235937239192 40.0 36.0 41.0 33.0 41.0 33 36.42883074611918 39.0 35.0 41.0 31.0 41.0 34 36.93888286132903 39.0 35.0 41.0 31.0 41.0 35 37.299697231031736 40.0 35.0 41.0 32.0 41.0 36 37.41170320295258 39.0 35.0 41.0 33.0 41.0 37 37.49360383167343 39.0 36.0 41.0 33.0 41.0 38 37.39465911830709 39.0 35.0 41.0 33.0 41.0 39 37.47941820137614 39.0 36.0 41.0 33.0 41.0 40 37.409612103340194 39.0 35.0 41.0 33.0 41.0 41 37.39098694337803 39.0 35.0 41.0 33.0 41.0 42 37.49294543667353 40.0 36.0 41.0 33.0 41.0 43 37.364247760529686 39.0 35.0 41.0 33.0 41.0 44 37.38224466329123 39.0 35.0 41.0 33.0 41.0 45 37.3562426973794 39.0 35.0 41.0 33.0 41.0 46 37.34313275468759 39.0 35.0 41.0 33.0 41.0 47 37.27904588364027 39.0 35.0 41.0 33.0 41.0 48 37.280309352918266 39.0 35.0 41.0 33.0 41.0 49 37.35879745544242 39.0 35.0 41.0 33.0 41.0 50 37.258401491125575 39.0 35.0 41.0 33.0 41.0 51 36.521330607021646 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 5.0 12 1.0 13 4.0 14 7.0 15 4.0 16 10.0 17 13.0 18 36.0 19 110.0 20 196.0 21 337.0 22 572.0 23 916.0 24 1190.0 25 1637.0 26 1983.0 27 2447.0 28 3256.0 29 4373.0 30 6591.0 31 9585.0 32 13996.0 33 23079.0 34 31529.0 35 40310.0 36 50154.0 37 75745.0 38 87291.0 39 75936.0 40 38.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.443711864092435 3.6935032177896474 52.51812904541998 16.344655872697935 2 17.43402140247408 9.27618279270758 52.411719430998346 20.87807637381999 3 18.09913944991561 10.07993471689015 51.16841929561008 20.652506537584152 4 18.16173334075187 4.255689089189339 53.75980637623101 23.82277119382778 5 17.741426955247686 22.483493759157255 39.6395519204733 20.135527365121757 6 15.506825052393406 32.18995159405775 38.544158830838846 13.759064522709991 7 78.48323411042489 1.3615330403011927 14.70075483595764 5.454478013316271 8 77.91548433761754 5.668920046736772 9.303538641295276 7.1120569743504145 9 73.3762681058625 5.021884678870157 10.820397262560508 10.781449952706838 10 39.405868061351285 28.6190860364621 17.397856043324246 14.577189858862369 11 27.119614607095826 23.45740833472431 29.15646618075261 20.26651087742725 12 24.148259426176303 19.880978875720988 33.54499341605 22.425768282052708 13 22.311708303195534 24.56601569020197 36.170923051243534 16.951352955358963 14 17.703870620745935 28.706717483632854 32.10139282998572 21.48801906563549 15 15.04803501548619 23.79193790686029 40.696693187930045 20.463333889723472 16 17.749772807359186 23.99687494204269 32.72849088447486 25.524861366123258 17 18.185148092509134 24.172137836384206 30.756783323132847 26.885930747973813 18 17.84273632671229 23.5895509931564 34.59077505146609 23.976937628665222 19 20.737587863276396 24.72018212503941 30.47279252211651 24.069437489567687 20 22.224308685250097 26.4783749698622 31.88880543036777 19.408510914519926 21 21.224197407221943 27.726311689756855 30.7859938055231 20.2634970974981 22 19.200328270183054 24.087288339917283 31.14602459244422 25.56635879745544 23 18.41860012240583 28.140126856952097 29.11241862794191 24.328854392700162 24 20.8901314935366 24.27391086629945 29.66927242715926 25.16668521300469 25 17.669096236948015 27.469676737328214 29.060720710695676 25.800506315028098 26 18.12185871399692 25.728639255179065 31.567258294849683 24.582243735974334 27 21.168558393145272 28.43524546078377 28.758183571653777 21.638012574417182 28 15.673510265398097 27.43884345036073 33.037519241825706 23.850127042415476 29 17.90231643761939 22.98818598267772 32.94270108867004 26.166796491032844 30 21.55293124872494 28.64319627589532 28.101179547098425 21.702692928281312 31 20.57693021013001 27.572145254919416 25.75669059144272 26.094233943507856 32 21.398996643112817 27.11103692575901 27.3658172443851 24.124149186743075 33 22.792522116508096 28.319330848124036 24.056918711400435 24.831228323967434 34 18.71951445687049 24.715777369758342 29.6173426806877 26.947365492683467 35 19.4201023757859 23.016700977392013 30.758869786160727 26.804326860661366 36 24.306830616294814 25.799810827352136 28.367783156215804 21.525575400137242 37 20.53914204640294 26.514308499786715 29.399423208887406 23.54712624492294 38 19.247389602922905 29.37229918952503 26.299170978690256 25.08114022886181 39 20.881553812199783 24.564161056399413 28.18510172666407 26.369183404736734 40 20.722982622081272 23.78706949312858 30.34690925276804 25.143038632022108 41 19.51468869971624 23.632207570615183 28.079155770693077 28.773947958975498 42 22.319822326081713 20.71301396539253 32.27758304122851 24.689580667297243 43 25.17224911441236 22.14177748103637 28.170032827018304 24.515940577532966 44 20.55954301823105 22.44663291233146 29.73256180567147 27.261262263766017 45 19.456267734935736 23.13029729779855 27.737671321797514 29.6757636454682 46 23.497051132253937 23.553849292457205 28.909799885012706 24.039299690276156 47 16.701441050464584 23.46575418683581 35.41469611825145 24.418108644448154 48 19.44143066451529 23.17828594743968 30.666601754483576 26.713681633561453 49 21.29560080862034 19.727507928559508 35.082716667593985 23.894174595226172 50 21.57008661139858 20.798327120310095 29.915938722899167 27.715647545392162 51 18.82244663291233 20.89662271184555 27.542007455627886 32.738923199614234 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 101.0 1 204.5 2 308.0 3 609.5 4 911.0 5 684.0 6 457.0 7 492.0 8 527.0 9 680.0 10 833.0 11 853.5 12 874.0 13 898.5 14 923.0 15 957.0 16 991.0 17 962.5 18 934.0 19 964.5 20 995.0 21 1249.5 22 1504.0 23 1741.5 24 1979.0 25 2444.5 26 3267.0 27 3624.0 28 4256.0 29 4888.0 30 5798.0 31 6708.0 32 7637.5 33 8567.0 34 9594.5 35 10622.0 36 11708.0 37 12794.0 38 14371.0 39 15948.0 40 18923.5 41 21899.0 42 25327.0 43 28755.0 44 33434.5 45 38114.0 46 50608.5 47 63103.0 48 61159.0 49 59215.0 50 53178.0 51 47141.0 52 37988.5 53 28836.0 54 24211.0 55 19586.0 56 16462.5 57 13339.0 58 11830.5 59 10322.0 60 9126.5 61 7931.0 62 6977.0 63 6023.0 64 4992.0 65 3961.0 66 3119.5 67 2278.0 68 1719.0 69 1160.0 70 1025.0 71 890.0 72 769.5 73 649.0 74 507.0 75 301.5 76 238.0 77 162.5 78 87.0 79 61.5 80 36.0 81 28.0 82 20.0 83 11.0 84 2.0 85 3.0 86 4.0 87 2.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 431352.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.822857466701684 #Duplication Level Percentage of deduplicated Percentage of total 1 71.99790583636627 27.231665303498907 2 11.59294311023994 8.76956469756373 3 4.519856799288795 5.128616984682078 4 2.3054358007035276 3.4879267875456317 5 1.5521475424361828 2.9353327632427524 6 1.1597209005734066 2.6318374994125726 7 0.9051257816032412 2.3964110398911447 8 0.7435696783419167 2.2499143968390025 9 0.6371302341777476 2.16882774315281 >10 4.406223865081974 29.777085110847008 >50 0.11536251922791244 2.949997343187861 >100 0.05266549790839481 3.643389001667066 >500 0.006269702131951763 1.7555329848568917 >1k 0.005642731918756587 4.873898343612549 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTGACACTGTCGTATGC 4252 0.9857378660583468 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGACACTGTCGTATGCCG 3641 0.8440902093881563 No Hit GAATCTGTCTCTTATACACATCTGACGCTGACACTGTCGTATGCCGTCTTC 2559 0.5932509875924998 No Hit CCTGTCTCTTATACACATCTGACGCTGACACTGTCGTATGCCGTCTTCTGC 2185 0.5065468573230216 TruSeq Adapter, Index 19 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCTGACACTGTCGTATGCCGTCTTCTGC 1963 0.4550807693021013 TruSeq Adapter, Index 19 (95% over 22bp) CTGTCTCTTATACACATCTGACGCTGACACTGTCGTATGCCGTCTTCTGCT 1854 0.42981138374228006 TruSeq Adapter, Index 13 (95% over 23bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGACACTGT 1539 0.35678517776665 No Hit TCTGTCTCTTATACACATCTGACGCTGACACTGTCGTATGCCGTCTTCTGC 1508 0.3495984717817467 TruSeq Adapter, Index 19 (95% over 22bp) GAATCAGTCTCTTATACACATCTGACGCTGACACTGTCGTATGCCGTCTTC 1052 0.24388434503607262 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGACACTGTCGTATGCCGTC 977 0.22649715313711308 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGACACTGTCGTATGCCGTCT 972 0.2253380070105158 No Hit GCTGTATCTTATACACATCTGACGCTGACACTGTCGTATGCCGTCTTCTGC 852 0.1975184999721805 TruSeq Adapter, Index 13 (95% over 22bp) CCTGTATCTTATACACATCTGACGCTGACACTGTCGTATGCCGTCTTCTGC 801 0.185695209480888 TruSeq Adapter, Index 13 (95% over 22bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGACACTGTCGTA 707 0.1639032623008587 No Hit CTGTCACTTATACACATCTGACGCTGACACTGTCGTATGCCGTCTTCTGCT 670 0.15532558096403865 TruSeq Adapter, Index 13 (95% over 23bp) TCTGTATCTTATACACATCTGACGCTGACACTGTCGTATGCCGTCTTCTGC 616 0.14280680279678779 TruSeq Adapter, Index 13 (95% over 22bp) TCCTGTCTCTTATACACATCTGACGCTGACACTGTCGTATGCCGTCTTCTG 614 0.14234314434614886 TruSeq Adapter, Index 13 (95% over 21bp) GAATATGTCTCTTATACACATCTGACGCTGACACTGTCGTATGCCGTCTTC 612 0.14187948589550992 No Hit GAACTGTCTCTTATACACATCTGACGCTGACACTGTCGTATGCCGTCTTCT 582 0.13492460913592613 No Hit GAATAATACGGCTGTCTCTTATACACATCTGACGCTGACACTGTCGTATGC 475 0.11011888202674383 No Hit GCTGACTCTTATACACATCTGACGCTGACACTGTCGTATGCCGTCTTCTGC 453 0.10501863906971567 TruSeq Adapter, Index 19 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCTGACACTGTCGTATGCCGTCTTCTG 445 0.10316400526716 TruSeq Adapter, Index 13 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.46064467070976833 0.0 2 0.0 0.0 0.0 1.8875535525510487 0.0 3 0.0 0.0 0.0 2.569595133440902 0.0 4 0.0 0.0 0.0 3.3974572970566963 0.0 5 0.0 0.0 0.0 5.15379550807693 0.0 6 0.0 0.0 0.0 5.955229140006305 0.0 7 0.0 0.0 0.0 7.231912683840576 0.0 8 0.0 0.0 0.0 9.202461099055991 0.0 9 0.0 0.0 0.0 9.965874738032975 0.0 10 0.0 0.0 0.0 12.388953801071978 0.0 11 0.0 0.0 0.0 14.976631614087799 0.0 12 0.0 0.0 0.0 18.42856877909457 0.0 13 0.0 0.0 0.0 19.24831691982418 0.0 14 0.0 0.0 0.0 19.539494426825424 0.0 15 0.0 0.0 0.0 20.14178675420538 0.0 16 0.0 0.0 0.0 21.068871826257904 0.0 17 0.0 0.0 0.0 22.55396984365437 0.0 18 0.0 0.0 0.0 24.055759565273835 0.0 19 0.0 0.0 0.0 25.48915966542406 0.0 20 0.0 0.0 0.0 26.52033605964502 0.0 21 0.0 0.0 0.0 27.78079155770693 0.0 22 0.0 0.0 0.0 29.07463046421484 0.0 23 0.0 0.0 0.0 30.208970863702962 0.0 24 0.0 0.0 0.0 31.09154472449415 0.0 25 0.0 0.0 0.0 31.858435801850923 0.0 26 0.0 0.0 0.0 32.55299616090803 0.0 27 0.0 0.0 0.0 33.25937981045642 0.0 28 0.0 0.0 0.0 33.95788126634396 0.0 29 0.0 0.0 0.0 34.71851295461711 0.0 30 0.0 0.0 0.0 35.56723974851165 0.0 31 0.0 0.0 0.0 36.305847660379456 0.0 32 0.0 0.0 0.0 37.0866484912554 0.0 33 0.0 0.0 0.0 37.72881544539031 0.0 34 0.0 0.0 0.0 38.39091971290269 0.0 35 0.0 0.0 0.0 39.169865909976075 0.0 36 0.0 0.0 0.0 39.870221999666164 0.0 37 0.0 0.0 0.0 40.56315955414603 0.0 38 0.0 0.0 0.0 41.26119735158293 0.0 39 0.0 0.0 0.0 42.12615219124984 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTGAGCG 30 2.1623364E-6 45.000004 16 TAACGGG 30 2.1623364E-6 45.000004 3 TCGCTAG 30 2.1623364E-6 45.000004 1 AGGGCGC 30 2.1623364E-6 45.000004 6 GTGCATC 20 7.028382E-4 45.0 18 CGTGGCA 25 3.8867394E-5 45.0 15 TAATAGT 20 7.028382E-4 45.0 23 AACCGAT 20 7.028382E-4 45.0 40 CGTATGA 20 7.028382E-4 45.0 15 GGTCGTA 25 3.8867394E-5 45.0 8 GTACAAT 50 2.1827873E-11 45.0 7 TTAGCGC 25 3.8867394E-5 45.0 20 TGAACGA 20 7.028382E-4 45.0 28 CGCGCAT 50 2.1827873E-11 45.0 36 AATGGTC 70 0.0 45.0 10 ATTCGAC 50 2.1827873E-11 45.0 16 CGTCTAA 20 7.028382E-4 45.0 19 CACGAGT 20 7.028382E-4 45.0 38 TCGGCAC 20 7.028382E-4 45.0 26 CACTCGA 35 1.2095734E-7 45.0 18 >>END_MODULE