SRR2934189.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934189.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	408472
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGC	2222	0.543978534636401	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCG	2099	0.5138663115219648	No Hit
CCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTGC	2002	0.4901192737813118	No Hit
CTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTGCT	1704	0.4171644568048728	No Hit
GCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTGC	1596	0.3907244560214654	No Hit
TCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTGC	1396	0.3417614916077479	No Hit
GAATCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTC	1337	0.3273174171057013	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCTGCACTT	957	0.23428778471963804	No Hit
GCTGTATCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTGC	703	0.1721048199142169	No Hit
CCTGTATCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTGC	680	0.16647407900663938	No Hit
TCTGTATCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTGC	634	0.15521259719148436	No Hit
CTGTCACTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTGCT	602	0.14737852288528958	No Hit
TCCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTG	551	0.1348929669597916	No Hit
GAATCAGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTC	539	0.13195518909496856	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCT	528	0.1292622260522141	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTC	500	0.12240741103429365	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCCTCG	35	1.2093551E-7	45.000004	10
CGTAAGG	30	2.1620526E-6	45.000004	2
ATCATAC	30	2.1620526E-6	45.000004	30
ACAACGT	20	7.02794E-4	45.0	22
CTGTCGA	20	7.02794E-4	45.0	12
TCCGCAT	20	7.02794E-4	45.0	23
TCCGATC	20	7.02794E-4	45.0	10
CGGCCTA	20	7.02794E-4	45.0	35
ACGCAGA	20	7.02794E-4	45.0	10
TTTCGCA	25	3.886375E-5	45.0	13
TGAACGT	25	3.886375E-5	45.0	25
CGTCTGG	25	3.886375E-5	45.0	2
CGACAAT	20	7.02794E-4	45.0	20
CGTTCAT	20	7.02794E-4	45.0	17
ACGGGCA	40	6.7957444E-9	45.0	5
ACGATGT	20	7.02794E-4	45.0	33
TACGAAA	20	7.02794E-4	45.0	20
CGAGGGT	25	3.886375E-5	45.0	4
TCTCGAG	25	3.886375E-5	45.0	1
GCGATTA	25	3.886375E-5	45.0	23