SRR2934185.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934185.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1132305
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGC	3445	0.3042466473255881	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCG	2944	0.26000061820799164	No Hit
CCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC	2761	0.2438388949973726	No Hit
CTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGCT	2560	0.2260874940939058	No Hit
GCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC	2381	0.21027903259280847	No Hit
GAATCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTC	2054	0.18139988783940725	No Hit
TCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC	1966	0.1736281302299292	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTCCAACTT	1226	0.10827471396840957	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AATCCCG	20	7.0332404E-4	45.000004	28
CCGAACG	20	7.0332404E-4	45.000004	15
TATCGTC	20	7.0332404E-4	45.000004	19
TACGTCG	20	7.0332404E-4	45.000004	39
ATCGAAT	35	1.2119017E-7	45.000004	43
TCGTTAG	140	0.0	43.39286	1
CGTTAGG	320	0.0	41.48438	2
TTATGGG	2925	0.0	40.53846	3
CGTTTAT	250	0.0	40.499996	1
TTACGGG	1120	0.0	40.379467	3
TACGGGA	660	0.0	40.227272	4
TTAGGGA	2360	0.0	40.13771	4
TATGGGC	910	0.0	39.80769	4
TATGGGA	1905	0.0	39.80315	4
CCGATGA	345	0.0	39.782608	18
TAGGGAG	1470	0.0	39.642857	5
TACGGGT	205	0.0	39.512196	4
TCGTCTA	40	3.4581535E-7	39.375004	39
TTTTACG	400	0.0	39.375	1
CGGGTAT	110	0.0	38.86364	6