SRR2934183.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934183.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1016364
Sequences flagged as poor quality	0
Sequence length	51
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCTGC	2008	0.19756701339283958	No Hit
CTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCTGCT	1738	0.17100172772746772	No Hit
GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA	1533	0.15083178861116686	No Hit
GCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCTGC	1283	0.12623430188397072	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGC	1278	0.12574235214942678	No Hit
TCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCTGC	1248	0.12279065374216323	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCG	1228	0.12082285480398754	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCGATA	50	2.1827873E-11	45.0	14
CGTAATT	20	7.032902E-4	45.0	12
AACTCGT	25	3.890487E-5	45.0	30
CGTTAGG	315	0.0	42.142857	2
TACGGGC	230	0.0	42.06522	4
GATAACG	55	6.184564E-11	40.909092	17
TTATGGG	2645	0.0	40.74669	3
CGTTTAT	205	0.0	40.609756	1
TTAGGGA	1840	0.0	40.475548	4
CTCAACT	695	0.0	40.467625	2
TTACGGG	965	0.0	40.33679	3
TCGTCAG	45	1.9279469E-8	40.0	1
CGTATGG	215	0.0	39.767445	2
ACTTGAC	685	0.0	39.416058	6
GCGCATA	40	3.4576988E-7	39.375	27
ATGGGAC	565	0.0	39.026546	5
GCGTTAG	150	0.0	39.000004	1
TAGGGAG	1200	0.0	39.000004	5
TACGGGT	110	0.0	38.863636	4
TGCATTA	565	0.0	38.628315	15