##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934182.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 971629 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.841367435512936 31.0 31.0 34.0 30.0 34.0 2 31.962372469327285 33.0 31.0 34.0 30.0 34.0 3 32.05628279929891 33.0 31.0 34.0 30.0 34.0 4 35.63816950708552 37.0 35.0 37.0 33.0 37.0 5 29.38544444433009 37.0 35.0 37.0 0.0 37.0 6 23.548964676846822 35.0 10.0 37.0 0.0 37.0 7 30.285003844059823 35.0 19.0 37.0 17.0 37.0 8 33.852839921410336 35.0 32.0 37.0 30.0 37.0 9 36.694706518640345 37.0 35.0 39.0 33.0 39.0 10 36.888311279305164 39.0 37.0 39.0 33.0 39.0 11 37.081566112168325 39.0 37.0 39.0 34.0 39.0 12 37.01874892577311 39.0 37.0 39.0 33.0 39.0 13 36.89084928506662 39.0 36.0 39.0 33.0 39.0 14 37.844044383195644 40.0 37.0 41.0 33.0 41.0 15 37.71389285416553 40.0 37.0 41.0 33.0 41.0 16 38.07211188632698 40.0 37.0 41.0 33.0 41.0 17 38.01043505288541 40.0 37.0 41.0 33.0 41.0 18 38.12371491587839 40.0 37.0 41.0 34.0 41.0 19 38.12875799301997 40.0 37.0 41.0 34.0 41.0 20 37.88913360963907 40.0 37.0 41.0 33.0 41.0 21 37.898471535946335 40.0 36.0 41.0 33.0 41.0 22 38.02068484987583 40.0 37.0 41.0 34.0 41.0 23 37.84652578298919 40.0 36.0 41.0 33.0 41.0 24 37.870681093297954 40.0 36.0 41.0 33.0 41.0 25 37.73874596167879 40.0 36.0 41.0 33.0 41.0 26 37.60225044744445 40.0 36.0 41.0 33.0 41.0 27 36.65046432331682 39.0 35.0 41.0 31.0 41.0 28 37.0162201828064 39.0 35.0 41.0 31.0 41.0 29 37.350328160234 39.0 35.0 41.0 32.0 41.0 30 37.36557986638933 39.0 35.0 41.0 32.0 41.0 31 37.399535213543444 39.0 35.0 41.0 33.0 41.0 32 37.246345055571624 39.0 35.0 41.0 32.0 41.0 33 36.02366644058586 39.0 35.0 41.0 30.0 41.0 34 36.47149992435384 39.0 35.0 41.0 30.0 41.0 35 36.76358466040021 39.0 35.0 41.0 30.0 41.0 36 36.819670882610545 39.0 35.0 41.0 31.0 41.0 37 36.84863770019215 39.0 35.0 41.0 31.0 41.0 38 36.838203676506154 39.0 35.0 41.0 31.0 41.0 39 36.82851890999548 39.0 35.0 41.0 31.0 41.0 40 36.907829017042516 39.0 35.0 41.0 31.0 41.0 41 36.77179561334625 39.0 35.0 41.0 31.0 41.0 42 36.69942333956685 39.0 35.0 41.0 31.0 41.0 43 36.619759187920494 39.0 35.0 41.0 31.0 41.0 44 36.6986164472242 39.0 35.0 41.0 31.0 41.0 45 36.556883337158524 39.0 35.0 41.0 31.0 41.0 46 36.506320828217355 39.0 35.0 40.0 31.0 41.0 47 36.36815904012746 39.0 35.0 40.0 31.0 41.0 48 36.365615888368914 39.0 35.0 40.0 31.0 41.0 49 36.41551559288576 39.0 35.0 40.0 31.0 41.0 50 36.32906901708368 39.0 35.0 40.0 31.0 41.0 51 35.6557791091044 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 0.0 8 1.0 9 2.0 10 12.0 11 10.0 12 17.0 13 5.0 14 23.0 15 28.0 16 46.0 17 97.0 18 169.0 19 380.0 20 770.0 21 1802.0 22 3409.0 23 5140.0 24 6780.0 25 7702.0 26 7797.0 27 8149.0 28 9291.0 29 11712.0 30 16118.0 31 23086.0 32 33470.0 33 52130.0 34 69940.0 35 85224.0 36 110868.0 37 164241.0 38 189105.0 39 163978.0 40 126.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.236099375378874 4.066984414833233 48.751323807749664 15.945592402038228 2 18.80223830289133 12.435610711495848 47.25991093308248 21.50224005253034 3 19.72717981863448 12.786258952748424 46.77207040959049 20.714490819026604 4 19.184894646001716 4.512216082475924 52.54124773962078 23.761641531901578 5 19.826394642399517 22.126861178495083 36.92211739254386 21.12462678656154 6 16.163473918542984 34.1990615759719 36.16112734387302 13.476337161612099 7 77.57189215225154 2.1241646760234616 15.474424909095962 4.829518262629049 8 77.45044662108685 8.403824916712036 8.443037414486392 5.702691047714714 9 72.8683478982204 4.864613962736806 9.842028181538428 12.425009957504356 10 41.32019525971333 26.500238259664954 16.742398590408477 15.43716789021324 11 33.65770268281412 21.451500521289503 24.67876113207819 20.212035663818188 12 25.985432711456742 19.919228429781327 29.728630989811954 24.36670786894998 13 26.965127636165654 21.113820192686713 32.9239864186845 18.997065752463133 14 20.497535581996832 27.134225100321213 31.14480938712204 21.223429930559913 15 17.834379171473884 21.84331673920807 36.76650244074642 23.555801648571624 16 21.825202829475035 22.99303540754753 29.029495826081764 26.15226593689567 17 22.178526989210905 24.80072126295119 29.521350227298694 23.499401520539216 18 22.512193440088758 21.46076331603935 30.39349381296771 25.633549430904186 19 22.521353314896942 23.827510294567166 27.60467215367182 26.046464236864068 20 25.295045742768075 26.069724143680357 30.001368835224145 18.633861278327426 21 23.73519110689368 28.028805233273197 29.03495058299001 19.201053076843117 22 21.607424232911946 21.664544800536007 32.42132542359275 24.306705542959296 23 22.86562051976629 25.122243160712575 29.72646967103699 22.285666648484142 24 22.146724727236425 25.954968408723904 27.57009105327239 24.32821581076728 25 21.626361502178302 29.33897609066835 24.759759126168525 24.27490328098482 26 21.019751366004925 23.240043267543477 28.789177762294045 26.951027604157552 27 23.80425038775088 25.30080925950131 27.281503536843793 23.613436815904013 28 17.380605148673002 25.9408683767158 31.029539052457267 25.64898742215393 29 21.23979420128465 22.274036695076003 30.181684573021183 26.304484530618165 30 23.15060583823661 24.56565211618838 29.05604917103133 23.227692874543678 31 22.64907696250318 22.319012709583596 28.312864272268527 26.719046055644696 32 25.148899425603805 24.071533476254825 27.78241489292724 22.99715220521413 33 23.59130902844604 24.661676421761804 24.496695755272846 27.250318794519305 34 20.063625107937288 22.541731463346608 29.439631793616698 27.955011635099403 35 22.136844412836588 23.318674102975518 28.90074297905888 25.643738505129015 36 22.23266287852668 26.48469734847354 25.78875270293497 25.493887070064808 37 21.75768734774281 24.17610013698644 30.127754523588735 23.93845799168201 38 20.50865093569665 24.10992261449586 29.183361138870907 26.19806531093658 39 21.080988731295587 23.749291138901782 28.4933858499489 26.67633427985373 40 21.849697775591302 21.077386533337314 28.852679366301338 28.220236324770053 41 19.54233560340418 24.387703537049635 26.085470894755098 29.984489964791088 42 21.251321234751124 22.418433373231963 31.48454811455813 24.845697277458783 43 21.650650608411233 24.062991121096633 27.782929492635567 26.50342877785657 44 22.9807879344894 20.77706614355891 29.554902128281473 26.687243793670216 45 21.195744466252037 19.935489780564392 27.93628020571638 30.93248554746719 46 23.4295188801487 22.291327245275717 28.48463765490738 25.794516219668207 47 17.31463346606575 23.92188788107395 34.128767255814715 24.63471139704558 48 19.41409735608962 24.88038129779988 29.40433025362561 26.30119109248489 49 21.67607183400248 20.53551304047121 33.681785949163725 24.10662917636258 50 20.98259726706387 22.660603995969655 28.930898521966718 27.42590021499976 51 19.311897854016298 21.35959301338268 27.674966473829006 31.65354265877202 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 112.0 1 531.5 2 951.0 3 1969.5 4 2988.0 5 2129.5 6 1271.0 7 1265.5 8 1260.0 9 1356.5 10 1453.0 11 1447.0 12 1441.0 13 1488.5 14 1536.0 15 1535.0 16 1534.0 17 1613.5 18 1693.0 19 1783.0 20 1873.0 21 2242.0 22 2611.0 23 3158.0 24 3705.0 25 4351.0 26 5874.0 27 6751.0 28 8545.0 29 10339.0 30 11605.0 31 12871.0 32 15578.0 33 18285.0 34 20526.5 35 22768.0 36 24879.0 37 26990.0 38 29381.5 39 31773.0 40 33886.5 41 36000.0 42 40770.0 43 45540.0 44 54936.0 45 64332.0 46 91231.5 47 118131.0 48 111618.5 49 105106.0 50 100852.5 51 96599.0 52 86892.0 53 77185.0 54 70910.5 55 64636.0 56 59060.0 57 53484.0 58 47961.5 59 42439.0 60 37377.5 61 32316.0 62 28313.5 63 24311.0 64 21081.0 65 17851.0 66 15483.0 67 13115.0 68 11001.5 69 8888.0 70 7359.0 71 5830.0 72 4935.5 73 4041.0 74 3217.0 75 1798.5 76 1204.0 77 900.0 78 596.0 79 422.5 80 249.0 81 172.5 82 96.0 83 76.5 84 57.0 85 39.0 86 21.0 87 10.5 88 0.0 89 2.5 90 5.0 91 3.0 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 971629.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.17645934212943 #Duplication Level Percentage of deduplicated Percentage of total 1 72.88071925487287 27.094470962039303 2 10.16815046817302 7.56031664929377 3 3.8803603934390045 4.3277418119848345 4 2.23329345029284 3.3210377261542288 5 1.5988602691106584 2.971998189416925 6 1.279644346017882 2.854358760127175 7 1.058867718835498 2.7555466888586855 8 0.892349672697654 2.6539521060805464 9 0.7452701375393467 2.493585447042125 >10 5.1442389586146735 32.47158231738462 >50 0.07285548641588309 1.8475878314100789 >100 0.03729483996750212 2.809415873439702 >500 0.0034692874385297803 0.917125584259989 >1k 0.003758394725073929 3.063390765566414 >5k 5.782145730882967E-4 1.6918403635106634 >10k+ 2.8910728654414836E-4 1.166048923430988 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGC 10849 1.1165784471233362 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCG 8936 0.9196925987182349 No Hit GAATCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTC 6805 0.700370203030169 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCGTTCCTAT 4192 0.43144039545958385 No Hit GCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTCTGC 2952 0.3038196677950123 TruSeq Adapter, Index 13 (95% over 21bp) GAATCAGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTC 2709 0.2788101219704229 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTC 2522 0.2595640928790722 No Hit CTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTCTGCT 2437 0.2508158978375491 TruSeq Adapter, Index 16 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTCTGC 2363 0.2431998221543408 TruSeq Adapter, Index 13 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCT 2269 0.23352534763783295 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCGTTCCTATCGTA 1852 0.19060773196353753 No Hit GAACTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTCT 1766 0.18175661698034948 No Hit TCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTCTGC 1628 0.16755366503058267 TruSeq Adapter, Index 13 (95% over 21bp) GAATATGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTC 1521 0.1565412312724301 No Hit GCTGTATCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTCTGC 1185 0.12196013087299783 TruSeq Adapter, Index 16 (95% over 22bp) GAATAATACGGCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGC 1106 0.11382945548146463 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0291994166497707E-4 0.0 0.0 0.2674889283872754 0.0 2 1.0291994166497707E-4 0.0 0.0 1.0446374078995173 0.0 3 1.0291994166497707E-4 0.0 0.0 1.3994024468186932 0.0 4 1.0291994166497707E-4 0.0 0.0 1.9637124869677625 0.0 5 1.0291994166497707E-4 0.0 0.0 3.3271958741453784 0.0 6 1.0291994166497707E-4 0.0 0.0 3.836443745503685 0.0 7 1.0291994166497707E-4 0.0 0.0 4.720834804230833 0.0 8 1.0291994166497707E-4 0.0 0.0 5.928188639902679 0.0 9 1.0291994166497707E-4 0.0 0.0 6.318975658404597 0.0 10 1.0291994166497707E-4 0.0 0.0 8.258193199256095 0.0 11 1.0291994166497707E-4 0.0 0.0 9.788406891930974 0.0 12 1.0291994166497707E-4 0.0 0.0 12.551601485752277 0.0 13 1.0291994166497707E-4 0.0 0.0 13.1045903323182 0.0 14 1.0291994166497707E-4 0.0 0.0 13.35396535097244 0.0 15 1.0291994166497707E-4 0.0 0.0 13.871446817663944 0.0 16 1.0291994166497707E-4 0.0 0.0 14.538059279828 0.0 17 1.0291994166497707E-4 0.0 0.0 15.341143584639816 0.0 18 1.0291994166497707E-4 0.0 0.0 16.13712641347675 0.0 19 1.0291994166497707E-4 0.0 0.0 17.266775693191537 0.0 20 1.0291994166497707E-4 0.0 0.0 17.949134906430334 0.0 21 1.0291994166497707E-4 0.0 0.0 18.80697262020792 0.0 22 1.0291994166497707E-4 0.0 0.0 19.698259315026622 0.0 23 1.0291994166497707E-4 0.0 0.0 20.496197622755187 0.0 24 2.0583988332995414E-4 0.0 0.0 21.150974291627772 0.0 25 2.0583988332995414E-4 0.0 0.0 21.675660154235825 0.0 26 2.0583988332995414E-4 0.0 0.0 22.17389559183598 0.0 27 2.0583988332995414E-4 0.0 0.0 22.718136243360377 0.0 28 2.0583988332995414E-4 0.0 0.0 23.271948449459618 0.0 29 2.0583988332995414E-4 0.0 0.0 23.87063375012479 0.0 30 2.0583988332995414E-4 0.0 0.0 24.579443388371487 0.0 31 2.0583988332995414E-4 0.0 0.0 25.115965044271015 0.0 32 2.0583988332995414E-4 0.0 0.0 25.61944939889608 0.0 33 2.0583988332995414E-4 0.0 0.0 26.162763770945496 0.0 34 2.0583988332995414E-4 0.0 0.0 26.745290640769266 0.0 35 2.0583988332995414E-4 0.0 0.0 27.380203760900507 0.0 36 2.0583988332995414E-4 0.0 0.0 27.927120330908195 0.0 37 2.0583988332995414E-4 0.0 0.0 28.488342772807318 0.0 38 2.0583988332995414E-4 0.0 0.0 29.13087196862177 0.0 39 2.0583988332995414E-4 0.0 0.0 30.14772099227174 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGCAT 30 2.165154E-6 45.000004 36 TACGCGC 30 2.165154E-6 45.000004 34 CGATAGT 35 1.2116652E-7 45.000004 24 AACGTAT 20 7.0327485E-4 45.0 32 GAATCGT 20 7.0327485E-4 45.0 12 CCCCGTA 20 7.0327485E-4 45.0 40 TTACGTC 20 7.0327485E-4 45.0 24 TAGGGAC 750 0.0 42.3 5 TAGGGAT 935 0.0 42.112297 5 AATACGG 545 0.0 42.11009 5 TCGTTAG 150 0.0 42.0 1 CGATCGA 75 0.0 42.0 41 CCGATGA 1865 0.0 41.86327 18 ACCCGTC 70 0.0 41.785717 39 CTAGGGA 1115 0.0 41.771297 4 TAATACG 545 0.0 41.697247 4 CGATGAA 1900 0.0 41.684208 19 TACGGCT 1515 0.0 41.435646 7 CGTTAGG 280 0.0 40.982143 2 TTAGGGA 1915 0.0 40.65274 4 >>END_MODULE