##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934179.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1560972 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.01006039826467 33.0 31.0 34.0 30.0 34.0 2 32.24911209169671 33.0 31.0 34.0 30.0 34.0 3 32.29192708133137 34.0 31.0 34.0 30.0 34.0 4 35.72146009025146 37.0 35.0 37.0 35.0 37.0 5 29.437713809088184 37.0 35.0 37.0 0.0 37.0 6 23.598708368888104 35.0 10.0 37.0 0.0 37.0 7 30.342615370423044 35.0 19.0 37.0 17.0 37.0 8 34.240542431254376 35.0 32.0 37.0 32.0 37.0 9 36.905823422841664 38.0 37.0 39.0 34.0 39.0 10 37.093058043321726 39.0 37.0 39.0 34.0 39.0 11 37.23293114802828 39.0 37.0 39.0 34.0 39.0 12 37.14801226415336 39.0 37.0 39.0 34.0 39.0 13 37.07405385874955 39.0 37.0 39.0 33.0 39.0 14 38.094522515458316 40.0 38.0 41.0 33.0 41.0 15 38.013241749371545 40.0 37.0 41.0 33.0 41.0 16 38.25972919437376 40.0 37.0 41.0 33.0 41.0 17 38.26110141629702 40.0 37.0 41.0 34.0 41.0 18 38.29093603216457 40.0 37.0 41.0 34.0 41.0 19 38.23909589665926 40.0 37.0 41.0 34.0 41.0 20 38.13039952029889 40.0 37.0 41.0 34.0 41.0 21 37.972568374064366 40.0 36.0 41.0 33.0 41.0 22 38.019242497623274 40.0 36.0 41.0 34.0 41.0 23 37.959152374289864 40.0 36.0 41.0 34.0 41.0 24 37.943669713486216 40.0 36.0 41.0 34.0 41.0 25 37.71550995149176 40.0 35.0 41.0 33.0 41.0 26 37.59240011992528 40.0 35.0 41.0 33.0 41.0 27 36.709488703192626 39.0 35.0 41.0 32.0 41.0 28 37.040645828368476 39.0 35.0 41.0 32.0 41.0 29 37.306371927235084 39.0 35.0 41.0 32.0 41.0 30 37.259353787255634 39.0 35.0 41.0 33.0 41.0 31 37.22132171493146 39.0 35.0 41.0 32.0 41.0 32 37.11429352992879 39.0 35.0 41.0 32.0 41.0 33 35.76227504401104 39.0 35.0 41.0 29.0 41.0 34 36.07556573724577 39.0 35.0 41.0 28.0 41.0 35 36.29442872774143 39.0 35.0 41.0 30.0 41.0 36 36.36503281288838 39.0 35.0 41.0 30.0 41.0 37 36.42605056336693 39.0 35.0 41.0 30.0 41.0 38 36.372851659094465 39.0 35.0 41.0 30.0 41.0 39 36.35511463370259 39.0 35.0 41.0 30.0 41.0 40 36.27026301560822 39.0 35.0 41.0 30.0 41.0 41 36.12005212137053 39.0 35.0 41.0 30.0 41.0 42 36.11281304213016 39.0 35.0 41.0 30.0 41.0 43 35.991919778189484 39.0 35.0 41.0 30.0 41.0 44 36.038200557088786 39.0 35.0 40.0 30.0 41.0 45 35.96584948352693 39.0 35.0 40.0 30.0 41.0 46 35.90992983858775 38.0 35.0 40.0 30.0 41.0 47 35.84137127379607 38.0 35.0 40.0 30.0 41.0 48 35.7560398264671 38.0 35.0 40.0 29.0 41.0 49 35.752968663115034 38.0 35.0 40.0 30.0 41.0 50 35.63783334998962 38.0 35.0 40.0 29.0 41.0 51 34.900374253990464 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 14.0 10 25.0 11 19.0 12 30.0 13 37.0 14 54.0 15 74.0 16 132.0 17 206.0 18 398.0 19 758.0 20 1342.0 21 2426.0 22 4034.0 23 6580.0 24 10112.0 25 14679.0 26 18817.0 27 20410.0 28 21431.0 29 23258.0 30 28686.0 31 37476.0 32 52143.0 33 83045.0 34 111968.0 35 134374.0 36 172094.0 37 254302.0 38 297061.0 39 264811.0 40 172.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.387479083545383 4.360680396573417 51.672291367173784 20.579549152707415 2 23.960391345904988 4.936091102210674 49.97360618896431 21.129911362920026 3 20.32592512870186 4.978244324690001 52.68922184382552 22.006608702782625 4 17.78520050327616 5.67684750270985 51.95025919747439 24.587692796539592 5 15.21833831740736 23.31463985260466 41.20323746998665 20.26378436000133 6 16.31143928270334 29.867031567510498 40.270741563589866 13.550787586196291 7 80.28843566700749 2.100229856781544 12.818487455252239 4.792847020958736 8 81.42497110774569 3.207424604669398 11.086489700007432 4.281114587577484 9 76.24057318132547 4.559402731118816 13.29389636713535 5.906127720420353 10 40.27977439697829 26.26549355145384 18.994254861714367 14.460477189853501 11 30.974738816583514 21.77931442716461 27.789223637579664 19.456723118672212 12 27.39722429358118 19.770373843989514 31.848617399927736 20.98378446250157 13 25.367335224462707 19.31719467101268 34.91081198125271 20.40465812327191 14 21.066425278608456 20.98115789392763 36.39174821841776 21.560668609046157 15 20.035913520550018 21.272835130931238 37.52418364967469 21.167067698844054 16 24.22778883926169 22.018588417985715 33.29822700214994 20.45539574060265 17 24.460272189379438 22.073105731557003 32.091350773748665 21.375271305314893 18 24.448420599472637 21.484754370994484 31.86834869555636 22.198476333976522 19 23.98057108007062 24.171221520949768 30.118285273534696 21.729922125444915 20 24.56962712976274 26.452108045499855 29.376824183905924 19.601440640831484 21 24.698649303126512 25.201092652526757 30.781910245667444 19.318347798679284 22 23.690815722511356 21.857791171142082 32.462914132988935 21.988478973357626 23 22.527373969552304 23.54090912585235 32.05195224513957 21.879764659455773 24 22.24229518530762 23.74776741671215 31.332464643824487 22.677472754155744 25 23.984286713663025 24.309468715646403 28.908782476559473 22.79746209413109 26 22.688555592284807 23.834828555541034 29.217372252673336 24.259243599500824 27 21.616082799691476 24.999551561462987 30.45640793044334 22.9279577084022 28 21.142147328715698 24.585514666502668 29.81219394069849 24.46014406408315 29 23.192600507888674 24.48384724389675 28.73395550977212 23.58959673844246 30 25.32127418044654 23.147372278298395 30.067803906796538 21.463549634458527 31 25.363235214981433 24.18127935670851 28.584881727538995 21.870603700771056 32 25.7460736002952 24.70953995331114 27.5044651665757 22.03992127981796 33 24.71940560112545 26.20597935132725 27.01457809621185 22.060036951335448 34 23.662756282623903 24.483462868007884 30.2313558475104 21.622425001857817 35 23.7765315457292 25.935699038804028 28.420304784454814 21.86746463101196 36 25.763434577942462 26.757430626558325 27.24084736945954 20.238287426039673 37 24.25245295879747 27.017589040674654 27.47083227629964 21.259125724228237 38 24.404281434900817 25.07892518251448 28.603972396686167 21.912820985898527 39 24.417670528363097 22.96959842969637 28.645677180628482 23.967053861312053 40 25.911995858990423 22.77215734811387 29.43614619608808 21.87970059680763 41 23.711572020510296 23.63078902119961 28.50883936419103 24.14879959409906 42 22.688555592284807 23.82175977531948 30.53033622640252 22.95934840599319 43 22.42532217105752 23.435333881709603 30.860515114941204 23.278828832291676 44 23.65096875536525 23.010534461860942 29.220767573025014 24.1177292097488 45 22.862357556701852 22.307318773174664 28.42837667812107 26.40194699200242 46 23.228219340257226 23.07844086889451 28.707561698736427 24.985778092111836 47 21.238497551525587 24.22567477187291 31.12778448300162 23.408043193599884 48 22.010644649615752 24.482822241526435 29.79002826444036 23.71650484441745 49 22.925779578365272 22.880935724663864 30.972048185361427 23.221236511609433 50 21.881045912418674 23.15063947335378 30.05665700601933 24.91165760820822 51 21.442601148515156 22.665621164248943 29.895155070046098 25.9966226171898 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 399.0 1 991.0 2 1583.0 3 12540.5 4 23498.0 5 15847.0 6 8196.0 7 7986.0 8 7776.0 9 7770.5 10 7765.0 11 7520.5 12 7276.0 13 7156.0 14 7036.0 15 6666.5 16 6297.0 17 5920.0 18 5543.0 19 5476.5 20 5410.0 21 5712.5 22 6015.0 23 6375.5 24 6736.0 25 7777.0 26 10847.0 27 12876.0 28 15199.0 29 17522.0 30 20546.0 31 23570.0 32 26753.5 33 29937.0 34 33765.5 35 37594.0 36 39686.0 37 41778.0 38 46099.0 39 50420.0 40 54083.5 41 57747.0 42 65648.5 43 73550.0 44 83954.5 45 94359.0 46 111308.5 47 128258.0 48 135331.5 49 142405.0 50 139613.0 51 136821.0 52 125377.5 53 113934.0 54 105684.5 55 97435.0 56 92209.5 57 86984.0 58 82839.5 59 78695.0 60 72509.5 61 66324.0 62 59575.5 63 52827.0 64 46006.5 65 39186.0 66 33267.5 67 27349.0 68 23390.0 69 19431.0 70 15596.0 71 11761.0 72 9598.0 73 7435.0 74 6262.0 75 4033.5 76 2978.0 77 2204.5 78 1431.0 79 1000.0 80 569.0 81 388.0 82 207.0 83 160.5 84 114.0 85 70.5 86 27.0 87 19.0 88 11.0 89 5.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1560972.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.3698097033367 #Duplication Level Percentage of deduplicated Percentage of total 1 71.73569889202909 27.524851154230173 2 8.413482359013287 6.456474341154404 3 4.005673945351552 4.61090841050259 4 2.7544054002098948 4.227440442075865 5 2.152022360099145 4.128634421716486 6 1.7855352282345638 4.110638815557845 7 1.4626222539449942 3.9284376286214386 8 1.203409227226352 3.6939666435131677 9 1.0472650368123098 3.616502415430161 >10 5.3390208691558 30.778350785490023 >50 0.06670142102332093 1.7334380389079684 >100 0.027673960731308175 1.8509760021378205 >500 0.0040079402805197235 1.0775857975316283 >1k 0.0022902515888684138 1.6976278598965826 >5k 1.9085429907236777E-4 0.5641672432336844 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7704 0.49353864130810804 No Hit CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3423 0.21928644459990312 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTT 2553 0.1635519407138629 No Hit TTGAATCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCT 2354 0.15080347373303302 No Hit CGTTCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTC 2071 0.13267374430803372 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCT 1770 0.11339088721642669 No Hit CGCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTG 1744 0.11172525836465996 No Hit TTGAATGATACCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGC 1691 0.10832993801298166 No Hit GAATCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTC 1657 0.10615180797605595 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGC 1629 0.10435805382799947 No Hit CCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTGC 1574 0.10083460818003141 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.406264814487383E-5 0.0 0.0 0.08712520147702842 0.0 2 6.406264814487383E-5 0.0 0.0 0.32550231522410394 0.0 3 6.406264814487383E-5 0.0 0.0 0.5458778248424699 0.0 4 6.406264814487383E-5 0.0 0.0 0.8197456456618056 0.0 5 6.406264814487383E-5 0.0 0.0 1.4597315006290952 0.0 6 6.406264814487383E-5 0.0 0.0 2.4049758740067086 0.0 7 6.406264814487383E-5 0.0 0.0 3.614798984222651 0.0 8 6.406264814487383E-5 0.0 0.0 4.893233190601753 0.0 9 6.406264814487383E-5 0.0 0.0 5.810097810851188 0.0 10 6.406264814487383E-5 0.0 0.0 6.9669411110513195 0.0 11 6.406264814487383E-5 0.0 0.0 8.194381449507102 0.0 12 1.2812529628974766E-4 0.0 0.0 9.347957554651845 0.0 13 1.2812529628974766E-4 0.0 0.0 9.693255228152715 0.0 14 1.2812529628974766E-4 0.0 0.0 9.973337125842104 0.0 15 1.2812529628974766E-4 0.0 0.0 10.180515729942625 0.0 16 1.2812529628974766E-4 0.0 0.0 10.496280522648709 0.0 17 1.2812529628974766E-4 0.0 0.0 10.908779914053552 0.0 18 1.2812529628974766E-4 0.0 0.0 11.318716799532599 0.0 19 1.2812529628974766E-4 0.0 0.0 11.662092593589122 0.0 20 1.2812529628974766E-4 0.0 0.0 11.995602739831336 0.0 21 1.2812529628974766E-4 0.0 0.0 12.471844466140327 0.0 22 1.2812529628974766E-4 0.0 0.0 12.969034678392694 0.0 23 1.2812529628974766E-4 0.0 0.0 13.422406039313966 0.0 24 1.2812529628974766E-4 0.0 0.0 13.815110072442042 0.0 25 1.2812529628974766E-4 0.0 0.0 14.15092647401747 0.0 26 1.921879444346215E-4 0.0 0.0 14.459067811594315 0.0 27 1.921879444346215E-4 0.0 0.0 14.812373316113293 0.0 28 1.921879444346215E-4 0.0 0.0 15.131661554467344 0.0 29 1.921879444346215E-4 0.0 0.0 15.497779588615298 0.0 30 1.921879444346215E-4 0.0 0.0 15.916941495427208 0.0 31 1.921879444346215E-4 0.0 0.0 16.266787616946363 0.0 32 2.562505925794953E-4 0.0 0.0 16.62951033074264 0.0 33 2.562505925794953E-4 0.0 0.0 16.98883772418724 0.0 34 2.562505925794953E-4 0.0 0.0 17.385513641500296 0.0 35 2.562505925794953E-4 0.0 0.0 17.81101775047855 0.0 36 2.562505925794953E-4 0.0 0.0 18.192126444292402 0.0 37 3.2031324072436917E-4 0.0 0.0 18.595721127605106 0.0 38 3.2031324072436917E-4 0.0 0.0 19.101751985301465 0.0 39 3.2031324072436917E-4 0.0 0.0 19.96076803427608 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTAT 2205 0.0 43.367348 1 CGTTATT 1675 0.0 42.44776 1 CGTTTTT 4815 0.0 42.383175 1 CTCGTAG 115 0.0 41.08696 1 TTAGGGA 2780 0.0 40.953236 4 TCGTTAG 210 0.0 40.714287 1 CGTTAGG 395 0.0 40.443035 2 TTATGGG 3770 0.0 39.38992 3 TAGGGAC 1170 0.0 39.03846 5 TTACGGG 1385 0.0 38.501804 3 GGGCGAT 3175 0.0 38.40945 7 TATGGGA 2360 0.0 38.135593 4 TAGGGAA 1275 0.0 38.11765 5 AGGGCGA 1010 0.0 38.09406 6 GTTTATT 2485 0.0 37.756542 2 TAGGGAT 1540 0.0 37.694805 5 TAGGGCG 695 0.0 37.553955 5 ACACGAC 540 0.0 37.5 26 TATCGCG 30 1.1401093E-4 37.499996 1 CTAGGGA 1850 0.0 37.459457 4 >>END_MODULE