SRR2934178.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934178.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1165926
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGC	2721	0.23337673231405767	No Hit
CTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGCT	2166	0.18577508349586508	No Hit
TCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGC	1424	0.12213468093172294	No Hit
GCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGC	1399	0.11999046251648905	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1356	0.11630240684228674	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	1253	0.10746822697152306	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCGCAT	35	1.2119563E-7	45.000004	36
TATTTCG	20	7.0333283E-4	45.0	1
TCGTTAG	160	0.0	42.1875	1
CGTTAGG	300	0.0	42.0	2
CGTTATT	205	0.0	41.707317	1
CGAGGGT	130	0.0	41.53846	4
TAACGAA	55	6.184564E-11	40.909092	19
CGATAAC	55	6.184564E-11	40.909092	16
TAGGGAC	820	0.0	40.609756	5
TACGGGC	330	0.0	40.227272	4
GCGTTAG	90	0.0	40.0	1
TTAGGGA	1950	0.0	39.461536	4
TTATGGG	2910	0.0	39.43299	3
CTCGTAG	115	0.0	39.130432	1
TCGTTCA	75	0.0	39.0	16
TATGGGC	910	0.0	38.571426	4
TAGGGCA	850	0.0	38.38235	5
CTAGGGA	1000	0.0	38.250004	4
TAGGGCG	490	0.0	38.112244	5
TTGTTAG	615	0.0	38.04878	1