##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934178.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1165926 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.09382842478854 33.0 31.0 34.0 30.0 34.0 2 32.312942673891826 34.0 31.0 34.0 30.0 34.0 3 32.3963913661759 34.0 31.0 34.0 30.0 34.0 4 35.769030796122564 37.0 35.0 37.0 35.0 37.0 5 30.431618301676092 37.0 35.0 37.0 0.0 37.0 6 24.510758830320277 35.0 17.0 37.0 0.0 37.0 7 30.761742168885505 35.0 23.0 37.0 17.0 37.0 8 34.517189770191244 35.0 32.0 37.0 32.0 37.0 9 37.11657000530051 39.0 37.0 39.0 34.0 39.0 10 37.11361012620012 39.0 37.0 39.0 34.0 39.0 11 37.22539680905992 39.0 37.0 39.0 34.0 39.0 12 37.055687925305726 39.0 35.0 39.0 34.0 39.0 13 36.90303844326312 39.0 35.0 39.0 33.0 39.0 14 37.597380965858896 40.0 37.0 41.0 32.0 41.0 15 37.58083274581749 40.0 36.0 41.0 32.0 41.0 16 37.95387957726305 40.0 37.0 41.0 33.0 41.0 17 38.057055078967274 40.0 36.0 41.0 33.0 41.0 18 38.15448579069341 40.0 37.0 41.0 34.0 41.0 19 38.157427658359104 40.0 37.0 41.0 34.0 41.0 20 38.05348109571276 40.0 36.0 41.0 33.0 41.0 21 37.92931283803603 40.0 36.0 41.0 33.0 41.0 22 38.09134713523843 40.0 36.0 41.0 34.0 41.0 23 38.093176582390306 40.0 36.0 41.0 34.0 41.0 24 38.045513180081755 40.0 36.0 41.0 34.0 41.0 25 37.810006810037684 40.0 36.0 41.0 34.0 41.0 26 37.70695824606364 40.0 35.0 41.0 33.0 41.0 27 37.00494971378973 39.0 35.0 41.0 33.0 41.0 28 37.28602415590698 39.0 35.0 41.0 33.0 41.0 29 37.50682290299727 40.0 35.0 41.0 33.0 41.0 30 37.495627509807655 39.0 35.0 41.0 33.0 41.0 31 37.48296461353465 39.0 35.0 41.0 33.0 41.0 32 37.52967769824157 39.0 35.0 41.0 33.0 41.0 33 36.503764389849785 39.0 35.0 41.0 31.0 41.0 34 36.815658969780245 39.0 35.0 41.0 31.0 41.0 35 37.06478112676105 39.0 35.0 41.0 31.0 41.0 36 37.15622174992238 39.0 35.0 41.0 32.0 41.0 37 37.192179435058485 39.0 35.0 41.0 32.0 41.0 38 37.14991345934476 39.0 35.0 41.0 32.0 41.0 39 37.183750941311885 39.0 35.0 41.0 33.0 41.0 40 37.09544345009889 39.0 35.0 41.0 32.0 41.0 41 36.955297334479205 39.0 35.0 41.0 32.0 41.0 42 37.03559145263078 39.0 35.0 41.0 32.0 41.0 43 36.93805438767126 39.0 35.0 41.0 32.0 41.0 44 36.96177716253004 39.0 35.0 41.0 32.0 41.0 45 36.91152268668852 39.0 35.0 41.0 32.0 41.0 46 36.88415388283647 39.0 35.0 41.0 32.0 41.0 47 36.813717165583405 39.0 35.0 40.0 32.0 41.0 48 36.722506402636185 39.0 35.0 40.0 32.0 41.0 49 36.733252367645974 39.0 35.0 40.0 32.0 41.0 50 36.634579724613744 38.0 35.0 40.0 32.0 41.0 51 35.84208603290432 37.0 34.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 5.0 10 11.0 11 11.0 12 15.0 13 20.0 14 20.0 15 30.0 16 49.0 17 103.0 18 199.0 19 333.0 20 571.0 21 1033.0 22 1570.0 23 2322.0 24 3750.0 25 5285.0 26 7275.0 27 8908.0 28 11243.0 29 14492.0 30 19320.0 31 27450.0 32 40459.0 33 67135.0 34 91338.0 35 95078.0 36 121755.0 37 189210.0 38 233992.0 39 222799.0 40 140.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.288035432780468 4.059863147403866 55.36423409375896 18.287867326056713 2 19.507241454431927 3.988846633491319 55.646842080886785 20.85706983118997 3 21.01565622518067 3.9045359654043224 53.27533651363808 21.80447129577692 4 19.104471467314394 4.084564543547361 52.243109768544485 24.56785422059376 5 16.08678423845081 19.834792259543057 43.50370435173416 20.57471915027197 6 16.588359810142325 28.48379742796713 40.804476441901116 14.123366319989433 7 84.63881927326435 1.8398251690072955 8.9884778279239 4.532877729804465 8 87.7213476670046 1.8150380041271916 6.471680020858956 3.991934308009256 9 83.42999469949208 3.5615467877035076 8.418973416837776 4.58948509596664 10 44.559603268131944 21.12638366414335 17.235828002806354 17.078185064918358 11 32.991373380471835 24.176148400498832 23.01732700016982 19.815151218859516 12 29.457529894693145 20.510049522868517 28.606875565001555 21.425545017436782 13 28.5926379547244 19.611107394465858 31.05076994594854 20.7454847048612 14 22.18519871758585 21.28531313308049 35.25944185136964 21.270046297964022 15 20.224353861222756 21.896329612685538 36.412002133926165 21.46731439216554 16 26.612923976307247 22.058518293613833 29.561481603463687 21.76707612661524 17 28.04783493978177 21.61217778829874 27.475843235333976 22.86414403658551 18 27.34187246875016 20.870363985364424 30.06837483682498 21.71938870906044 19 27.991227573619593 22.343098961683676 27.904858455853976 21.76081500884276 20 24.83819727838645 28.053838751344422 27.800735209610217 19.30722876065891 21 25.003902477515727 23.801682096462383 31.77740268250301 19.417012743518885 22 23.335443244253923 20.623864636349136 33.11127807425171 22.929414045145233 23 22.910373385617955 22.41969044347583 31.961376622530075 22.70855954837614 24 23.244785689657835 25.719042203364534 27.9802491753336 23.055922931644034 25 26.282199727941567 23.75528120995672 25.876342066306098 24.086176995795615 26 23.2930734883689 23.762743090041734 26.587965273953923 26.356218147635442 27 22.146774323584857 24.63844189082326 30.616179757548935 22.598604028042946 28 20.79986208387153 23.338445150035252 29.08795240864343 26.77374035744979 29 23.70364843051789 25.065141355454806 28.192355260968533 23.03885495305877 30 27.288524314579142 22.115640272195662 28.875760554271885 21.72007485895331 31 25.168063839386036 22.618588143672927 30.109114986714424 22.10423303022662 32 28.031281573616162 22.54782893597021 26.97589726963804 22.44499222077559 33 27.59471870427454 23.77003343265353 27.172050370263634 21.46319749280829 34 23.483480083641673 22.02026543708606 32.188921080754696 22.307333398517574 35 23.913781835210813 25.137787475362934 28.058041419438283 22.890389269987978 36 28.475735166725848 23.135687856690733 27.097688875623327 21.290888100960096 37 23.748162404818142 25.4244265931114 29.27166904246067 21.555741959609787 38 24.883654708789408 23.49831807507509 28.56073198470572 23.05729523142978 39 23.89937268746044 21.585417942476624 28.96616080265815 25.549048567404792 40 26.106545355365608 20.80946818237178 29.522113753359992 23.561872708902623 41 22.516694884581014 21.6603798182732 28.457037582145006 27.36588771500078 42 21.968032276490963 21.615951612709555 31.6810843912907 24.734931719508786 43 22.295583081602093 21.499306130920832 31.953228592552186 24.251882194924892 44 24.130004820202995 21.4275176983788 29.69931196319492 24.743165518223282 45 23.221113518353654 20.74934429800862 28.09989656290365 27.929645620734078 46 23.608873976564553 20.742225492870045 29.81312707667553 25.83577345388987 47 20.955703878290734 22.8631148117462 32.526678365522336 23.65450294444073 48 21.537644756185212 25.129982520331478 30.11940723510755 23.212965488375765 49 25.102364987143268 21.291145407169925 30.554940879609855 23.051548726076955 50 22.81233971967346 22.063235574127347 28.71605916670526 26.40836553949393 51 22.085792751855607 23.049061432715284 27.311681873463666 27.553463941965443 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 236.0 1 854.5 2 1473.0 3 2916.5 4 4360.0 5 3082.0 6 1804.0 7 1800.5 8 1797.0 9 1845.5 10 1894.0 11 1885.0 12 1876.0 13 1835.5 14 1795.0 15 1755.5 16 1716.0 17 1807.0 18 1898.0 19 1982.0 20 2066.0 21 2339.5 22 2613.0 23 3010.0 24 3407.0 25 4460.5 26 6676.0 27 7838.0 28 8930.5 29 10023.0 30 12351.0 31 14679.0 32 16838.0 33 18997.0 34 21484.0 35 23971.0 36 25580.0 37 27189.0 38 31722.0 39 36255.0 40 41029.0 41 45803.0 42 51032.5 43 56262.0 44 63708.0 45 71154.0 46 83206.5 47 95259.0 48 107824.0 49 120389.0 50 120763.5 51 121138.0 52 109795.0 53 98452.0 54 93192.5 55 87933.0 56 82353.5 57 76774.0 58 70480.5 59 64187.0 60 55405.5 61 46624.0 62 41345.0 63 36066.0 64 31441.5 65 26817.0 66 22849.0 67 18881.0 68 15155.5 69 11430.0 70 9623.5 71 7817.0 72 6291.0 73 4765.0 74 3831.5 75 1980.5 76 1063.0 77 801.5 78 540.0 79 366.0 80 192.0 81 122.5 82 53.0 83 38.0 84 23.0 85 13.5 86 4.0 87 2.0 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1165926.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.07604749541958 #Duplication Level Percentage of deduplicated Percentage of total 1 70.21292526317194 25.33004826586536 2 9.932147972964273 7.16625284008389 3 4.131677226829606 4.471637516125449 4 2.739974369484042 3.9538978195895456 5 1.9255323451787383 3.473279816931741 6 1.5716738857166592 3.401986904905491 7 1.286182406513835 3.248026430961631 8 1.0374586400519472 2.994192573843796 9 0.8745816576540173 2.8396304478134202 >10 6.162642085481311 36.95423729087457 >50 0.0819734731669611 1.9976515390384315 >100 0.039232461263134205 2.6031661078440353 >500 0.0024988828272600157 0.6357364993412543 >1k 0.0014993296963560095 0.9302559467813958 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGC 2721 0.23337673231405767 No Hit CTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGCT 2166 0.18577508349586508 No Hit TCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGC 1424 0.12213468093172294 No Hit GCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGC 1399 0.11999046251648905 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1356 0.11630240684228674 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1253 0.10746822697152306 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.2884368304678E-4 0.0 0.0 0.198040012831003 0.0 2 4.2884368304678E-4 0.0 0.0 0.7175412504738723 0.0 3 4.2884368304678E-4 0.0 0.0 0.9944885009854828 0.0 4 4.2884368304678E-4 0.0 0.0 1.3027413403595083 0.0 5 4.2884368304678E-4 0.0 0.0 1.8984052161114857 0.0 6 4.2884368304678E-4 0.0 0.0 2.4092438113568098 0.0 7 4.2884368304678E-4 0.0 0.0 3.033725982609531 0.0 8 4.2884368304678E-4 0.0 0.0 3.9664609932362773 0.0 9 4.2884368304678E-4 0.0 0.0 4.441791331525328 0.0 10 4.2884368304678E-4 0.0 0.0 5.295619104471467 0.0 11 4.2884368304678E-4 0.0 0.0 6.8477759308909825 0.0 12 4.2884368304678E-4 0.0 0.0 8.136536967183167 0.0 13 4.2884368304678E-4 0.0 0.0 8.561092213399478 0.0 14 4.2884368304678E-4 0.0 0.0 8.767880637364636 0.0 15 4.2884368304678E-4 0.0 0.0 9.010520393232504 0.0 16 5.14612419656136E-4 0.0 0.0 9.516727476700924 0.0 17 5.14612419656136E-4 0.0 0.0 10.211968855656362 0.0 18 5.14612419656136E-4 0.0 0.0 10.928137806344486 0.0 19 5.14612419656136E-4 0.0 0.0 11.459046285956399 0.0 20 5.14612419656136E-4 0.0 0.0 12.064058953998796 0.0 21 5.14612419656136E-4 0.0 0.0 12.880234251573427 0.0 22 5.14612419656136E-4 0.0 0.0 13.767082988114169 0.0 23 5.14612419656136E-4 0.0 0.0 14.573137574768896 0.0 24 5.14612419656136E-4 0.0 0.0 15.17317565608795 0.0 25 5.14612419656136E-4 0.0 0.0 15.733331274883655 0.0 26 5.14612419656136E-4 0.0 0.0 16.25334712494618 0.0 27 5.14612419656136E-4 0.0 0.0 16.885634251230353 0.0 28 5.14612419656136E-4 0.0 0.0 17.447848319704683 0.0 29 5.14612419656136E-4 0.0 0.0 18.103979154766254 0.0 30 5.14612419656136E-4 0.0 0.0 18.842876820655857 0.0 31 5.14612419656136E-4 0.0 0.0 19.40440473923731 0.0 32 5.14612419656136E-4 0.0 0.0 19.948607373023673 0.0 33 6.00381156265492E-4 0.0 0.0 20.502587642783503 0.0 34 6.00381156265492E-4 0.0 0.0 21.137362062429347 0.0 35 6.00381156265492E-4 0.0 0.0 21.824798486353338 0.0 36 6.00381156265492E-4 0.0 0.0 22.403994764676316 0.0 37 6.00381156265492E-4 0.0 0.0 23.03671073464354 0.0 38 6.00381156265492E-4 0.0 0.0 23.812917800958207 0.0 39 6.00381156265492E-4 0.0 0.0 25.423225830798867 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGCAT 35 1.2119563E-7 45.000004 36 TATTTCG 20 7.0333283E-4 45.0 1 TCGTTAG 160 0.0 42.1875 1 CGTTAGG 300 0.0 42.0 2 CGTTATT 205 0.0 41.707317 1 CGAGGGT 130 0.0 41.53846 4 TAACGAA 55 6.184564E-11 40.909092 19 CGATAAC 55 6.184564E-11 40.909092 16 TAGGGAC 820 0.0 40.609756 5 TACGGGC 330 0.0 40.227272 4 GCGTTAG 90 0.0 40.0 1 TTAGGGA 1950 0.0 39.461536 4 TTATGGG 2910 0.0 39.43299 3 CTCGTAG 115 0.0 39.130432 1 TCGTTCA 75 0.0 39.0 16 TATGGGC 910 0.0 38.571426 4 TAGGGCA 850 0.0 38.38235 5 CTAGGGA 1000 0.0 38.250004 4 TAGGGCG 490 0.0 38.112244 5 TTGTTAG 615 0.0 38.04878 1 >>END_MODULE