SRR2934166.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934166.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1473508
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGC	4613	0.3130624333223844	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCG	4309	0.29243139501108917	No Hit
GAATCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTTC	3107	0.21085735537234954	No Hit
CCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTTCTGC	3027	0.20542813476411392	No Hit
CTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTTCTGCT	2561	0.17380292472114167	No Hit
GCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTTCTGC	2116	0.14360288508783123	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1815	0.12317544254934483	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCGTCGATT	1773	0.12032510173002114	No Hit
TCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTTCTGC	1669	0.11326711493931489	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTTAG	155	0.0	45.0	1
TTAGGGA	2760	0.0	41.576084	4
CGTATGG	300	0.0	41.250004	2
TAGGCGT	60	3.6379788E-12	41.249996	4
CGTTATT	460	0.0	40.597824	1
TATGGGA	2180	0.0	40.355507	4
TTATGGG	3765	0.0	40.278885	3
TACGGGT	190	0.0	40.26316	4
CTTATGG	975	0.0	39.69231	2
TCCGATA	40	3.4590994E-7	39.375	14
CCGATCG	40	3.4590994E-7	39.375	40
CGATCGA	40	3.4590994E-7	39.375	41
TAGGGAC	1005	0.0	39.179104	5
TTTACGG	895	0.0	38.96648	2
CGATGAA	630	0.0	38.928574	19
CGTTAGG	400	0.0	38.8125	2
TAATACG	210	0.0	38.57143	4
TACGGGA	905	0.0	38.53591	4
TAGGGAG	1890	0.0	38.452377	5
GTTTTAG	640	0.0	38.320312	1