##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934165.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 801582 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.845320877963825 31.0 31.0 34.0 30.0 34.0 2 31.934250020584294 33.0 31.0 34.0 30.0 34.0 3 32.044089063876186 33.0 31.0 34.0 30.0 34.0 4 35.653769670476635 37.0 35.0 37.0 35.0 37.0 5 29.63567669932708 37.0 35.0 37.0 0.0 37.0 6 23.81574062291818 35.0 17.0 37.0 0.0 37.0 7 30.41712887764446 35.0 19.0 37.0 17.0 37.0 8 33.76176361245637 35.0 32.0 37.0 29.0 37.0 9 36.68167823129761 37.0 35.0 39.0 33.0 39.0 10 36.91769525762804 39.0 37.0 39.0 34.0 39.0 11 37.05739649842437 39.0 37.0 39.0 34.0 39.0 12 37.083362650358914 39.0 37.0 39.0 34.0 39.0 13 37.00531948072686 39.0 37.0 39.0 33.0 39.0 14 38.2029698770681 40.0 37.0 41.0 33.0 41.0 15 37.973613429443276 40.0 37.0 41.0 33.0 41.0 16 38.28306024835887 40.0 37.0 41.0 34.0 41.0 17 38.12131260432495 40.0 37.0 41.0 33.0 41.0 18 38.24132278419425 40.0 37.0 41.0 34.0 41.0 19 38.23655970318695 40.0 37.0 41.0 34.0 41.0 20 37.91260407544082 40.0 37.0 41.0 33.0 41.0 21 38.04264442065815 40.0 37.0 41.0 33.0 41.0 22 38.10763839507374 40.0 37.0 41.0 34.0 41.0 23 37.84562777108268 40.0 37.0 41.0 33.0 41.0 24 37.91909249459194 40.0 37.0 41.0 33.0 41.0 25 37.85791846623302 40.0 36.0 41.0 33.0 41.0 26 37.743379966117004 40.0 36.0 41.0 33.0 41.0 27 36.6970291249055 40.0 36.0 41.0 31.0 41.0 28 37.10927890097332 40.0 36.0 41.0 31.0 41.0 29 37.452723489299906 40.0 36.0 41.0 32.0 41.0 30 37.44572233408435 40.0 36.0 41.0 32.0 41.0 31 37.5353975014409 40.0 36.0 41.0 33.0 41.0 32 37.23328742411881 40.0 36.0 41.0 32.0 41.0 33 36.04662779353828 39.0 35.0 41.0 29.0 41.0 34 36.38115252088994 40.0 35.0 41.0 29.0 41.0 35 36.61251624911737 40.0 35.0 41.0 30.0 41.0 36 36.7138496123915 39.0 35.0 41.0 31.0 41.0 37 36.681915262568275 39.0 35.0 41.0 31.0 41.0 38 36.82045505013835 40.0 35.0 41.0 31.0 41.0 39 36.73861563757669 39.0 35.0 41.0 31.0 41.0 40 36.956108046338365 39.0 35.0 41.0 31.0 41.0 41 36.73728202479597 39.0 35.0 41.0 30.0 41.0 42 36.72885244429141 39.0 35.0 41.0 31.0 41.0 43 36.571563483211946 39.0 35.0 41.0 31.0 41.0 44 36.66221297384422 39.0 35.0 41.0 31.0 41.0 45 36.6598439086706 39.0 35.0 41.0 31.0 41.0 46 36.52305316237141 39.0 35.0 41.0 31.0 41.0 47 36.41286231477254 39.0 35.0 41.0 31.0 41.0 48 36.40038199460567 39.0 35.0 41.0 31.0 41.0 49 36.48540136879321 39.0 35.0 41.0 31.0 41.0 50 36.359156018972485 39.0 35.0 41.0 31.0 41.0 51 35.774841500931906 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 11.0 11 9.0 12 7.0 13 13.0 14 13.0 15 12.0 16 16.0 17 64.0 18 120.0 19 375.0 20 1061.0 21 2499.0 22 4470.0 23 6226.0 24 7405.0 25 7394.0 26 6666.0 27 6061.0 28 6588.0 29 8231.0 30 11393.0 31 16278.0 32 23678.0 33 37544.0 34 52064.0 35 68810.0 36 88979.0 37 133565.0 38 162703.0 39 149201.0 40 119.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.109877716815 3.8553759939719203 47.224862833746265 16.809883455466814 2 17.164557088357775 16.627494130357217 47.2832473783094 18.924701402975614 3 18.348341155365265 16.602044457086112 45.6832863013391 19.36632808620952 4 16.58407998183592 3.841653130933579 57.31740483194483 22.256862055285673 5 22.534812408462265 21.150674541094986 36.99858529757405 19.315927752868703 6 14.533260477405928 36.51641379172686 35.80569423964111 13.1446314912261 7 74.68967616538296 1.5001584366914427 19.112704626600895 4.697460771324705 8 74.92620842284383 11.387980269018016 8.147762799064848 5.538048509073308 9 70.8118445773483 4.1592750336210145 9.229249159786521 15.79963122924417 10 42.53875461275328 26.7051904858143 16.133096801075872 14.622958100356545 11 31.66188861526332 22.14009296615942 26.46815921515204 19.729859203425228 12 22.56575122694871 19.82130337258072 30.08849999126727 27.524445409203302 13 25.024389270218144 21.572964462774863 34.37876599025427 19.02388027675272 14 19.923102065665148 29.287708556329857 28.659450935774505 22.12973844223049 15 16.635478341579528 22.356165682363127 36.12905479414458 24.879301181912766 16 18.765141931829806 23.29817785329511 27.88860029292075 30.048079921954336 17 18.643881723891006 27.36251562535087 30.504801754530416 23.48880089622771 18 18.767387491236082 22.378746029726216 31.380445169676964 27.47342130936074 19 20.056962356939152 24.50304522806151 27.654313594866153 27.785678820133185 20 25.63343488251982 24.651501655476295 31.24122048648797 18.473842975515918 21 22.771469419223486 31.29374162593471 27.206823506515864 18.727965448325936 22 21.152296333999516 21.475781641803334 32.52293589426908 24.848986129928065 23 23.506765371477904 26.07356452614954 27.694733664179083 22.72493643819347 24 21.488381725138538 25.914504068205126 27.91529749919534 24.681816707460996 25 18.525865101761266 32.30399385215736 25.398898677864523 23.771242368216853 26 19.07078751768378 24.062042311329346 32.18435543712309 24.682814733863783 27 23.399727039778835 27.958212634515245 25.386548101130014 23.2555122245759 28 17.872407314535508 27.22965336047965 31.32567847082395 23.5722608541609 29 19.644403192686465 21.294764602997574 34.62203492593397 24.438797278381998 30 19.163104959941716 31.016040779358818 28.446621805379863 21.374232455319607 31 23.800434640498413 24.461252872444742 24.934067880765788 26.80424460629106 32 24.94579469099855 26.172743399926645 26.490739562515124 22.390722346559677 33 22.72431267169173 25.155005975683085 23.107679563662856 29.013001788962328 34 21.10863267887752 24.43779925197921 27.942743225272025 26.510824843871244 35 20.794379115299495 24.419335763527624 27.12560910798895 27.660676013183927 36 21.153793373603698 27.460197459523794 26.616865149167523 24.76914401770499 37 19.10896202759044 26.923883021325327 29.96786354983021 23.99929140125402 38 21.840061278821132 23.967479309665137 24.78873028585971 29.40372912565402 39 20.253573558288483 27.29103198425114 28.790067641239446 23.665326816220922 40 18.862449506101683 22.908947556207597 27.254604020549362 30.973998917141355 41 18.882909047358847 26.797882187973283 23.598459047234094 30.720749717433776 42 19.763542594519336 21.75086266907191 28.1440950520346 30.341499684374153 43 21.198579808428832 22.905204957197142 26.35513272503624 29.541082509337784 44 20.70043988013703 22.553774910115248 30.093614876581558 26.652170333166165 45 21.134331858749324 21.191344117008615 27.559501086601244 30.114822937640817 46 24.23083352670095 24.967876025160248 27.923780723619046 22.87750972451976 47 16.79965368483823 24.632539153823316 33.3620265924135 25.20578056892495 48 19.919109960053994 25.62295560529054 28.14883567744785 26.30909875720762 49 20.35562175797361 20.235359576437595 33.763357959634824 25.645660705953976 50 21.44671412282212 21.604402294462698 28.94950235908491 27.99938122363027 51 19.49993887088283 20.427978672175772 28.394599679134515 31.677482777806887 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 102.0 1 393.0 2 684.0 3 1642.0 4 2600.0 5 1824.5 6 1049.0 7 1067.0 8 1085.0 9 1124.0 10 1163.0 11 1161.5 12 1160.0 13 1187.5 14 1215.0 15 1306.5 16 1398.0 17 1383.5 18 1369.0 19 1472.5 20 1576.0 21 1661.5 22 1747.0 23 2379.0 24 3011.0 25 3903.0 26 5727.5 27 6660.0 28 7355.5 29 8051.0 30 10172.5 31 12294.0 32 14156.0 33 16018.0 34 18224.0 35 20430.0 36 22254.0 37 24078.0 38 25896.5 39 27715.0 40 31621.0 41 35527.0 42 39208.0 43 42889.0 44 50500.0 45 58111.0 46 86986.5 47 115862.0 48 102534.5 49 89207.0 50 82845.5 51 76484.0 52 65203.5 53 53923.0 54 49341.5 55 44760.0 56 41392.0 57 38024.0 58 34344.0 59 30664.0 60 26781.5 61 22899.0 62 20525.5 63 18152.0 64 15749.5 65 13347.0 66 10851.5 67 8356.0 68 7106.5 69 5857.0 70 4987.5 71 4118.0 72 3190.5 73 2263.0 74 1808.0 75 1139.5 76 926.0 77 677.5 78 429.0 79 314.5 80 200.0 81 110.5 82 21.0 83 13.0 84 5.0 85 4.5 86 4.0 87 2.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 801582.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.487945220433524 #Duplication Level Percentage of deduplicated Percentage of total 1 73.30599528459656 26.747851402737176 2 9.779278920577422 7.1365158709873855 3 3.7684747727612073 4.1251170321928985 4 2.1781120113385994 3.178993270147644 5 1.6769399138945869 3.0594045858072105 6 1.2916836106369738 2.8278528496232207 7 1.063736613043126 2.7169494285980953 8 0.9199912678150455 2.6854872786650055 9 0.7880937964263326 2.5880330945310766 >10 5.110552941358867 30.353313221245653 >50 0.07087206230207184 1.7498883556045368 >100 0.03378357208671995 2.3714603985099467 >500 0.0055081911010956 1.2999552961378273 >1k 0.0055081911010956 3.8655648622527643 >5k 7.344254801460799E-4 1.8624385298202224 >10k+ 7.344254801460799E-4 3.4311745231392994 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGC 13348 1.6652070530525884 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCG 12260 1.5294754622733544 No Hit GAATCTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTC 8291 1.034329613189917 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTAGTCACCT 5609 0.6997412616550771 No Hit GCTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTCTGC 2988 0.37276286144149945 Illumina PCR Primer Index 3 (95% over 22bp) GAATCAGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTC 2980 0.37176483503871094 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTC 2913 0.36340636391535736 No Hit GAATGACTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCT 2877 0.3589152451028092 No Hit CCTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTCTGC 2503 0.3122575107724475 RNA PCR Primer, Index 7 (95% over 23bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTAGTCACCTCGTA 2229 0.27807510647694184 No Hit CTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTCTGCT 1940 0.2420214026762078 TruSeq Adapter, Index 7 (95% over 24bp) GAACTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTCT 1666 0.20783899838070213 TruSeq Adapter, Index 7 (95% over 21bp) GAATATGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTC 1643 0.20496967247268524 No Hit GAATAATACGGCTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGC 1276 0.15918521124476348 No Hit GCTGTATCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTCTGC 1268 0.158187184841975 TruSeq Adapter, Index 7 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTCTGC 1201 0.14982871371862141 Illumina PCR Primer Index 3 (95% over 22bp) GAATGATACGGCGACCACCGATGAATGATACGGCGACCACCCCTCGAATGC 1181 0.14733364771165022 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCG 1136 0.14171974919596497 No Hit CCTGTATCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTCTGC 1049 0.1308662120656402 TruSeq Adapter, Index 7 (95% over 23bp) CTGTCACTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTCTGCT 847 0.10566604539523095 TruSeq Adapter, Index 7 (95% over 24bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 808 0.10080066668163706 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2588630982232635 0.0 2 0.0 0.0 0.0 1.1594571734395234 0.0 3 0.0 0.0 0.0 1.524485330259412 0.0 4 0.0 0.0 0.0 2.092487106746409 0.0 5 0.0 0.0 0.0 3.7823953132680126 0.0 6 0.0 0.0 0.0 4.321828583975189 0.0 7 0.0 0.0 0.0 5.333577849802016 0.0 8 0.0 0.0 0.0 6.605188240254896 0.0 9 0.0 0.0 0.0 6.9861848195194005 0.0 10 0.0 0.0 0.0 9.549740388381975 0.0 11 0.0 0.0 0.0 10.954587303607116 0.0 12 0.0 0.0 0.0 14.305710457570155 0.0 13 0.0 0.0 0.0 14.836161490652236 0.0 14 0.0 0.0 0.0 15.089909703561208 0.0 15 0.0 0.0 0.0 15.6668937176733 0.0 16 0.0 0.0 0.0 16.323969350609172 0.0 17 0.0 0.0 0.0 17.09107739445247 0.0 18 0.0 0.0 0.0 17.84683288796405 0.0 19 0.0 0.0 0.0 19.31867232547637 0.0 20 0.0 0.0 0.0 19.990718354454067 0.0 21 0.0 0.0 0.0 20.767432402424205 0.0 22 0.0 0.0 0.0 21.59292499083063 0.0 23 0.0 0.0 0.0 22.35154981025023 0.0 24 0.0 0.0 0.0 22.999643205561004 0.0 25 1.247533003485607E-4 0.0 0.0 23.529844732042385 0.0 26 1.247533003485607E-4 0.0 0.0 24.010020185083995 0.0 27 2.495066006971214E-4 0.0 0.0 24.493189717333973 0.0 28 2.495066006971214E-4 0.0 0.0 24.9762344962836 0.0 29 2.495066006971214E-4 0.0 0.0 25.51791332639705 0.0 30 2.495066006971214E-4 0.0 0.0 26.099637965922387 0.0 31 2.495066006971214E-4 0.0 0.0 26.602643272927786 0.0 32 2.495066006971214E-4 0.0 0.0 27.070093889333844 0.0 33 3.742599010456822E-4 0.0 0.0 27.541536611351052 0.0 34 3.742599010456822E-4 0.0 0.0 28.053399402681197 0.0 35 3.742599010456822E-4 0.0 0.0 28.570127572724935 0.0 36 3.742599010456822E-4 0.0 0.0 29.070637813723362 0.0 37 3.742599010456822E-4 0.0 0.0 29.539211209832555 0.0 38 3.742599010456822E-4 0.0 0.0 30.048828441756427 0.0 39 3.742599010456822E-4 0.0 0.0 30.54434855074091 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTAC 35 1.2113196E-7 45.000004 30 ACGACCG 25 3.8897448E-5 45.000004 38 TACGATA 20 7.032009E-4 45.0 25 CTACGAT 20 7.032009E-4 45.0 24 CGTACAG 20 7.032009E-4 45.0 30 CGTAAGC 55 1.8189894E-12 45.0 43 CTTTACG 150 0.0 43.500004 1 GCGAACC 100 0.0 42.750004 33 CTCGAAT 390 0.0 42.692307 43 ATCAGTC 380 0.0 42.63158 3 ACGGGCG 95 0.0 42.63158 5 CGATGAA 2755 0.0 42.63158 19 CCGATGA 2720 0.0 42.6011 18 ATGAATG 2890 0.0 42.430794 21 TCTACGG 175 0.0 42.428574 2 TCGTTAG 85 0.0 42.35294 1 TACGGCT 1865 0.0 42.345844 7 TAATACG 630 0.0 42.142857 4 AATACGG 625 0.0 42.120003 5 GATGAAT 2960 0.0 42.035473 20 >>END_MODULE