SRR2934163.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934163.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1445999
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGC	7716	0.5336103275313469	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCG	6382	0.44135576857245407	No Hit
GAATCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCTTC	6354	0.43941939102309197	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3685	0.2548411167642578	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACAGTTCGT	2729	0.1887276547217529	No Hit
GAATCAGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCTTC	2228	0.15408032785638165	No Hit
GCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCTTCTGC	1936	0.13388667627017722	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTC	1869	0.129253201419918	No Hit
CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1717	0.11874143758052391	No Hit
CCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCTTCTGC	1706	0.11798071782898882	No Hit
GAATGACTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCT	1700	0.11756577978269694	No Hit
CTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCTTCTGCT	1643	0.11362386834292418	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTATC	20	7.0338923E-4	45.0	38
CGTTAGG	370	0.0	43.175674	2
CGTTTAT	920	0.0	42.554344	1
AATACGG	365	0.0	41.91781	5
CGTTATT	795	0.0	41.88679	1
TTAGGGA	3130	0.0	41.765175	4
CGAACGA	65	0.0	41.53846	22
CCGATGA	1590	0.0	41.462265	18
CGATGAA	1615	0.0	41.099075	19
TTATGGG	4115	0.0	40.407047	3
CGTTTTT	2235	0.0	40.369125	1
TCGTTAG	230	0.0	40.108692	1
TAGGGAC	1270	0.0	40.03937	5
TATGGGA	2505	0.0	39.97006	4
TAGGGAG	1735	0.0	39.293945	5
CTACGGG	570	0.0	39.07895	3
TAATACG	400	0.0	38.812504	4
TTTATGG	2610	0.0	38.706894	2
TATGGGC	1065	0.0	38.661972	4
TTTACGG	810	0.0	38.61111	2