##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934163.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1445999 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.015261421342615 33.0 31.0 34.0 30.0 34.0 2 32.20926639644979 33.0 31.0 34.0 30.0 34.0 3 32.28457211934448 34.0 31.0 34.0 30.0 34.0 4 35.75088571983798 37.0 35.0 37.0 35.0 37.0 5 29.64492921502712 37.0 35.0 37.0 0.0 37.0 6 23.848217045793255 35.0 15.0 37.0 0.0 37.0 7 30.461157995268323 35.0 19.0 37.0 17.0 37.0 8 34.1952795264727 35.0 32.0 37.0 32.0 37.0 9 36.92523369656549 38.0 37.0 39.0 34.0 39.0 10 37.05535550162898 39.0 37.0 39.0 34.0 39.0 11 37.20560525975468 39.0 37.0 39.0 34.0 39.0 12 37.160168852122304 39.0 37.0 39.0 34.0 39.0 13 37.08543781842173 39.0 37.0 39.0 33.0 39.0 14 38.11601529461639 40.0 38.0 41.0 33.0 41.0 15 37.99930912815292 40.0 37.0 41.0 33.0 41.0 16 38.302865354678666 40.0 38.0 41.0 33.0 41.0 17 38.2936613372485 40.0 37.0 41.0 34.0 41.0 18 38.36851408610933 40.0 38.0 41.0 34.0 41.0 19 38.352826661705855 40.0 37.0 41.0 34.0 41.0 20 38.18182516032169 40.0 37.0 41.0 34.0 41.0 21 38.123690265345964 40.0 37.0 41.0 34.0 41.0 22 38.218758795822126 40.0 37.0 41.0 34.0 41.0 23 38.102136308531335 40.0 37.0 41.0 34.0 41.0 24 38.097231740824164 40.0 37.0 41.0 34.0 41.0 25 37.88175994589208 40.0 36.0 41.0 33.0 41.0 26 37.75844519947801 40.0 36.0 41.0 33.0 41.0 27 36.90003174276054 40.0 35.0 41.0 32.0 41.0 28 37.24204719367026 40.0 35.0 41.0 32.0 41.0 29 37.500892462581234 40.0 35.0 41.0 32.0 41.0 30 37.49488346810752 40.0 36.0 41.0 33.0 41.0 31 37.50631916066332 40.0 36.0 41.0 33.0 41.0 32 37.40476791477726 40.0 36.0 41.0 33.0 41.0 33 36.16851048997959 39.0 35.0 41.0 30.0 41.0 34 36.50573271489123 39.0 35.0 41.0 30.0 41.0 35 36.77042446087445 39.0 35.0 41.0 30.0 41.0 36 36.88521153887382 39.0 35.0 41.0 31.0 41.0 37 36.99024273184145 39.0 35.0 41.0 32.0 41.0 38 36.88050752455569 39.0 35.0 41.0 31.0 41.0 39 36.849431431142065 39.0 35.0 41.0 32.0 41.0 40 36.82067276671699 39.0 35.0 41.0 31.0 41.0 41 36.69416922141716 39.0 35.0 41.0 31.0 41.0 42 36.7230703479048 39.0 35.0 41.0 31.0 41.0 43 36.60236417867509 39.0 35.0 41.0 31.0 41.0 44 36.672004614111074 39.0 35.0 41.0 31.0 41.0 45 36.58388007183961 39.0 35.0 41.0 31.0 41.0 46 36.53919885145149 39.0 35.0 41.0 31.0 41.0 47 36.45369187668871 39.0 35.0 41.0 31.0 41.0 48 36.44083225507072 39.0 35.0 41.0 31.0 41.0 49 36.44154871476398 39.0 35.0 40.0 31.0 41.0 50 36.335797604286036 39.0 35.0 40.0 31.0 41.0 51 35.67544998302212 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 15.0 10 12.0 11 17.0 12 21.0 13 21.0 14 31.0 15 38.0 16 86.0 17 135.0 18 269.0 19 562.0 20 1348.0 21 2543.0 22 4311.0 23 6407.0 24 8414.0 25 10648.0 26 12516.0 27 13505.0 28 14656.0 29 17698.0 30 22863.0 31 31601.0 32 45611.0 33 71628.0 34 98001.0 35 119105.0 36 158350.0 37 239811.0 38 291877.0 39 273675.0 40 222.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.0495339208395 4.015977881035878 52.49436548711306 17.440122711011558 2 20.204370819066956 8.330780311742954 51.11033963370652 20.354509235483565 3 19.68452260340429 8.301527179479377 51.295747784057944 20.71820243305839 4 17.670275014021446 4.39011368610905 53.98371644793668 23.955894851932815 5 17.155682680278478 22.021799461825353 40.74975155584478 20.072766302051384 6 15.994409401389628 31.50064419131687 39.24594691974199 13.258999487551511 7 81.19971037324369 1.7676360772033728 12.777602197511891 4.255051352041046 8 82.76077645973476 4.965632756315876 8.26155481435326 4.012035969596106 9 78.1216999458506 4.160168852122304 9.52905223309283 8.189078968934279 10 41.08170199287828 26.177403995438446 17.41425823945936 15.32663577222391 11 31.44199961410762 23.952437034880383 25.3911655540564 19.2143977969556 12 25.79503858578049 20.82601716875323 30.41260747759853 22.96633676786775 13 26.17512183618384 20.423873045555357 33.3520977538712 20.0489073643896 14 20.95651518431202 24.146904665909176 33.246150239384676 21.650429910394127 15 18.87954279359806 22.13901945990281 36.52070298803803 22.460734758461108 16 23.13079054688143 22.53058266292024 30.5931055277355 23.745521262462837 17 23.103404635826166 23.743584884913474 30.1998825725329 22.95312790672746 18 23.1169592786717 22.59026458524522 30.651888417626843 23.640887718456234 19 23.79289335608116 23.711219717302708 28.626368344653073 23.86951858196306 20 24.894484712645028 26.30153962762077 29.428858526181557 19.375117133552653 21 23.78777578684356 26.263365327361914 30.289854972237183 19.659003913557342 22 22.94434505141428 21.294966317404093 32.48626036394216 23.274428267239465 23 22.78922737844217 24.272907519299807 30.751266079713744 22.186599022544275 24 21.97449652454808 25.621663638771537 29.18660386348815 23.217235973192235 25 22.625741788203175 27.492550133160538 26.7590779799986 23.12263009863769 26 21.07767709382925 24.68819134729692 28.9567973421835 25.277334216690328 27 21.910803534442277 26.11461003776628 28.548498304632297 23.426088123159143 28 19.37670772939677 25.905273793412032 29.67692232152304 25.041096155668157 29 21.777124327195246 25.11502428424916 29.000365837044146 24.107485551511445 30 22.43203487692592 25.677403649656743 29.187917833968076 22.702643639449267 31 22.880375435944288 25.697044050514556 27.598635960329155 23.823944553212 32 25.843448024514537 25.76626954790425 26.06696131878376 22.323321108797447 33 24.354650314419306 26.050847891319428 26.302023722008105 23.29247807225316 34 21.360526528718207 25.192133604518396 29.741860125767722 23.70547974099567 35 22.41903348480877 25.26184319629543 27.523324704927184 24.79579861396861 36 23.26198012585071 27.789991556010758 26.094139760815878 22.853888557322655 37 22.10402635133219 26.16869029646632 27.877958421824633 23.849324930376852 38 23.255963524179478 25.15893856081505 27.37892626481761 24.206171650187862 39 24.073460631715513 23.624151883922465 28.525676712086245 23.776710772275774 40 22.51121888742662 22.090402552145612 31.136743524718895 24.261635035708874 41 21.168271900602974 24.000431535568143 28.31468071554683 26.516615848282054 42 21.71260146099686 23.438328795524754 29.345041040830594 25.50402870264779 43 23.10063838218422 23.65762355299001 28.917793165832066 24.32394489899371 44 22.861219129473813 23.004096130080313 28.987226132244903 25.147458608200974 45 21.902089835470147 22.898148615593787 27.340475339194565 27.8592862097415 46 22.88576963054608 24.061634897396196 28.50250933783495 24.550086134222777 47 19.458173899152072 25.070418444272786 31.826093932291794 23.64531372428335 48 20.615297797578005 25.552645610404984 29.21412808722551 24.617928504791497 49 22.25582451993397 23.085078205448276 30.94995224754651 23.709145027071248 50 21.706377390302485 23.08231195180633 29.440545947818777 25.770764710072413 51 20.399391700824136 22.869102952353355 28.90783465272106 27.823670694101448 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 297.0 1 910.0 2 1523.0 3 6467.5 4 11412.0 5 7740.5 6 4069.0 7 3930.5 8 3792.0 9 3864.5 10 3937.0 11 3921.0 12 3905.0 13 3911.0 14 3917.0 15 3756.0 16 3595.0 17 3695.5 18 3796.0 19 3867.0 20 3938.0 21 4165.5 22 4393.0 23 5391.5 24 6390.0 25 7776.5 26 10942.5 27 12722.0 28 15326.5 29 17931.0 30 20712.0 31 23493.0 32 28012.5 33 32532.0 34 36558.5 35 40585.0 36 42877.0 37 45169.0 38 48573.0 39 51977.0 40 56418.0 41 60859.0 42 66568.5 43 72278.0 44 81467.5 45 90657.0 46 116703.5 47 142750.0 48 140666.5 49 138583.0 50 133566.0 51 128549.0 52 116202.0 53 103855.0 54 95789.5 55 87724.0 56 82082.0 57 76440.0 58 71015.5 59 65591.0 60 59008.5 61 52426.0 62 47058.0 63 41690.0 64 36722.5 65 31755.0 66 27177.5 67 22600.0 68 19041.5 69 15483.0 70 13031.0 71 10579.0 72 8889.0 73 7199.0 74 5779.5 75 3304.0 76 2248.0 77 1640.5 78 1033.0 79 746.0 80 459.0 81 329.5 82 200.0 83 146.0 84 92.0 85 66.5 86 41.0 87 26.5 88 12.0 89 6.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1445999.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.443748997627864 #Duplication Level Percentage of deduplicated Percentage of total 1 71.87524768257788 26.194034856862025 2 9.197293703320648 6.70367726362562 3 3.700965615230573 4.046311857909432 4 2.3765875328198707 3.464470380679162 5 1.8147531205848826 3.3068203609628677 6 1.506358127070268 3.2938402490091403 7 1.266971450863523 3.2321232679701453 8 1.079385944562398 3.14694963481596 9 0.9105814796895021 2.9866502598923517 >10 6.172836211355288 36.00324743345042 >50 0.06503384605303376 1.6210175791200099 >100 0.028037862450508048 1.950330977370183 >500 0.002761303731498347 0.6801966688244636 >1k 0.0025488957521523203 1.7871515298907923 >5k 6.372239380380801E-4 1.5831776796173813 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGC 7716 0.5336103275313469 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCG 6382 0.44135576857245407 No Hit GAATCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCTTC 6354 0.43941939102309197 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3685 0.2548411167642578 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACAGTTCGT 2729 0.1887276547217529 No Hit GAATCAGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCTTC 2228 0.15408032785638165 No Hit GCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCTTCTGC 1936 0.13388667627017722 No Hit GAATGATCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTC 1869 0.129253201419918 No Hit CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1717 0.11874143758052391 No Hit CCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCTTCTGC 1706 0.11798071782898882 No Hit GAATGACTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCT 1700 0.11756577978269694 No Hit CTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCTTCTGCT 1643 0.11362386834292418 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12206094195085888 0.0 2 0.0 0.0 0.0 0.4634166413669719 0.0 3 0.0 0.0 0.0 0.6710931335360536 0.0 4 0.0 0.0 0.0 1.0105124554028047 0.0 5 0.0 0.0 0.0 1.944053903218467 0.0 6 0.0 0.0 0.0 2.5381760291673783 0.0 7 0.0 0.0 0.0 3.2885223295451795 0.0 8 0.0 0.0 0.0 4.307679327579065 0.0 9 0.0 0.0 0.0 4.797582847567668 0.0 10 0.0 0.0 0.0 6.093918460524523 0.0 11 0.0 0.0 0.0 7.392812858100179 0.0 12 0.0 0.0 0.0 9.13133411572207 0.0 13 0.0 0.0 0.0 9.561486557044645 0.0 14 0.0 0.0 0.0 9.774764712838667 0.0 15 0.0 0.0 0.0 10.11100284301718 0.0 16 0.0 0.0 0.0 10.570131791239136 0.0 17 0.0 0.0 0.0 11.13299525103406 0.0 18 0.0 0.0 0.0 11.717850427282453 0.0 19 0.0 0.0 0.0 12.407269991196397 0.0 20 0.0 0.0 0.0 12.92891627172633 0.0 21 0.0 0.0 0.0 13.58991257946928 0.0 22 6.915634104864526E-5 0.0 0.0 14.313426219520208 0.0 23 1.3831268209729051E-4 0.0 0.0 14.963495825377473 0.0 24 1.3831268209729051E-4 0.0 0.0 15.495377244382603 0.0 25 1.3831268209729051E-4 0.0 0.0 15.952362346032052 0.0 26 1.3831268209729051E-4 0.0 0.0 16.384589477586083 0.0 27 1.3831268209729051E-4 0.0 0.0 16.859347758885033 0.0 28 1.3831268209729051E-4 0.0 0.0 17.298974618931272 0.0 29 1.3831268209729051E-4 0.0 0.0 17.798214244961443 0.0 30 1.3831268209729051E-4 0.0 0.0 18.37318006443988 0.0 31 1.3831268209729051E-4 0.0 0.0 18.838394770674114 0.0 32 1.3831268209729051E-4 0.0 0.0 19.291230491860645 0.0 33 2.0746902314593577E-4 0.0 0.0 19.743927900365076 0.0 34 2.7662536419458103E-4 0.0 0.0 20.247731844904457 0.0 35 2.7662536419458103E-4 0.0 0.0 20.797732225264333 0.0 36 2.7662536419458103E-4 0.0 0.0 21.2691018458519 0.0 37 2.7662536419458103E-4 0.0 0.0 21.76986291138514 0.0 38 2.7662536419458103E-4 6.915634104864526E-5 0.0 22.350845332534806 0.0 39 2.7662536419458103E-4 6.915634104864526E-5 0.0 23.335700785408566 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTATC 20 7.0338923E-4 45.0 38 CGTTAGG 370 0.0 43.175674 2 CGTTTAT 920 0.0 42.554344 1 AATACGG 365 0.0 41.91781 5 CGTTATT 795 0.0 41.88679 1 TTAGGGA 3130 0.0 41.765175 4 CGAACGA 65 0.0 41.53846 22 CCGATGA 1590 0.0 41.462265 18 CGATGAA 1615 0.0 41.099075 19 TTATGGG 4115 0.0 40.407047 3 CGTTTTT 2235 0.0 40.369125 1 TCGTTAG 230 0.0 40.108692 1 TAGGGAC 1270 0.0 40.03937 5 TATGGGA 2505 0.0 39.97006 4 TAGGGAG 1735 0.0 39.293945 5 CTACGGG 570 0.0 39.07895 3 TAATACG 400 0.0 38.812504 4 TTTATGG 2610 0.0 38.706894 2 TATGGGC 1065 0.0 38.661972 4 TTTACGG 810 0.0 38.61111 2 >>END_MODULE