##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934161.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 571237 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.948882862979815 33.0 31.0 34.0 30.0 34.0 2 32.17372649180638 33.0 31.0 34.0 30.0 34.0 3 32.24889844320308 34.0 31.0 34.0 30.0 34.0 4 35.68418712373323 37.0 35.0 37.0 33.0 37.0 5 29.571920236259206 37.0 35.0 37.0 0.0 37.0 6 23.64071129846281 35.0 10.0 37.0 0.0 37.0 7 30.34781360451091 35.0 19.0 37.0 17.0 37.0 8 34.22214772502481 35.0 32.0 37.0 32.0 37.0 9 36.85194761543808 38.0 37.0 39.0 34.0 39.0 10 36.98163984475796 39.0 37.0 39.0 34.0 39.0 11 37.102873238253125 39.0 37.0 39.0 34.0 39.0 12 37.1000968074547 39.0 37.0 39.0 34.0 39.0 13 36.998035841515865 39.0 37.0 39.0 33.0 39.0 14 38.09223317117063 40.0 37.0 41.0 33.0 41.0 15 37.98636817993232 40.0 37.0 41.0 33.0 41.0 16 38.2131672143086 40.0 37.0 41.0 34.0 41.0 17 38.22734171631039 40.0 37.0 41.0 34.0 41.0 18 38.30029217295098 40.0 37.0 41.0 34.0 41.0 19 38.3146312301199 40.0 37.0 41.0 34.0 41.0 20 38.28823062931848 40.0 37.0 41.0 34.0 41.0 21 38.13619040783423 40.0 37.0 41.0 34.0 41.0 22 38.204753893742875 40.0 37.0 41.0 34.0 41.0 23 38.15858041408382 40.0 37.0 41.0 34.0 41.0 24 38.12901475219567 40.0 37.0 41.0 34.0 41.0 25 37.83840682588838 40.0 36.0 41.0 33.0 41.0 26 37.65790206166617 40.0 36.0 41.0 33.0 41.0 27 36.74731678795316 39.0 35.0 41.0 32.0 41.0 28 37.03344846359742 39.0 35.0 41.0 31.0 41.0 29 37.33559975981948 39.0 35.0 41.0 32.0 41.0 30 37.35922568040936 39.0 35.0 41.0 33.0 41.0 31 37.36701229087051 39.0 35.0 41.0 33.0 41.0 32 37.41002946237726 39.0 35.0 41.0 33.0 41.0 33 36.274905161955544 39.0 35.0 41.0 31.0 41.0 34 36.69890255708226 39.0 35.0 41.0 31.0 41.0 35 37.00602201888183 39.0 35.0 41.0 31.0 41.0 36 37.07088476411717 39.0 35.0 41.0 32.0 41.0 37 37.139141897321075 39.0 35.0 41.0 32.0 41.0 38 37.119115183365224 39.0 35.0 41.0 32.0 41.0 39 37.23565000166306 39.0 35.0 41.0 33.0 41.0 40 37.212743572282605 39.0 35.0 40.0 33.0 41.0 41 37.14881739103034 39.0 35.0 40.0 33.0 41.0 42 37.16680292067916 39.0 35.0 40.0 33.0 41.0 43 36.99988796243941 39.0 35.0 40.0 32.0 41.0 44 36.99833344128619 39.0 35.0 40.0 32.0 41.0 45 36.93904456469031 39.0 35.0 40.0 32.0 41.0 46 36.851263135966335 39.0 35.0 40.0 32.0 41.0 47 36.79499927350644 39.0 35.0 40.0 32.0 41.0 48 36.76916936402929 39.0 35.0 40.0 32.0 41.0 49 36.81777440887058 39.0 35.0 40.0 32.0 41.0 50 36.75464299406376 39.0 35.0 40.0 32.0 41.0 51 36.116112926858726 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 3.0 11 9.0 12 8.0 13 8.0 14 15.0 15 17.0 16 16.0 17 36.0 18 66.0 19 126.0 20 220.0 21 372.0 22 611.0 23 944.0 24 1341.0 25 2118.0 26 2885.0 27 3707.0 28 4824.0 29 6534.0 30 9283.0 31 12976.0 32 19068.0 33 31710.0 34 43113.0 35 57030.0 36 71156.0 37 103585.0 38 113512.0 39 85882.0 40 58.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.115449454429598 5.105761706612142 53.56533277781376 18.213456061144498 2 19.558256905627612 4.487454419094001 52.68583792716508 23.268450748113306 3 20.03966829879717 4.5025094662985765 52.38648756995783 23.071334664946423 4 19.413483370299893 4.611746087875961 51.04431260580109 24.93045793602305 5 15.294527490341137 22.0468912202816 40.93362299710978 21.72495829226748 6 16.672239368248203 29.64128724154773 38.65033252397866 15.036140866225404 7 81.01225935995042 2.404956261586697 10.573019604822518 6.009764773640363 8 81.6281158258306 2.9656692406129155 8.687287413105244 6.718927520451231 9 75.88759131498834 5.035213055176748 12.314503437277349 6.762692192557555 10 41.97504713455186 23.71520052097466 18.620642570421733 15.689109774051751 11 29.664570047108292 24.47407993529831 24.853782230492772 21.007567787100626 12 27.00805445025445 20.709092723335498 30.635795650491826 21.647057175918228 13 23.512482559778167 23.71327487540198 31.61927536206513 21.154967202754722 14 19.65681494721105 25.708943923450338 31.483954995912377 23.15028613342623 15 17.85055940003886 23.816209384196053 35.519057764115416 22.814173451649665 16 19.333831667066384 22.75150244119341 33.26430185719762 24.65036403454258 17 18.590532476012584 23.168492237022463 30.121123106521463 28.119852180443495 18 19.826621874983587 23.50688068174856 31.823918968834302 24.842578474433555 19 22.932513125025164 24.94026122257487 29.181233008366053 22.945992644033915 20 25.892055311543196 24.24737893378755 28.565726659862715 21.294839094806534 21 23.72920521604868 25.6734070097 29.23287532145152 21.3645124527998 22 22.016255949807174 23.681064076731726 27.64404266530354 26.658637308157562 23 22.29057291456961 25.085209816591014 26.508261894800235 26.115955374039146 24 23.431430387037256 22.331536647661128 28.238366912507416 25.9986660527942 25 21.164245313241263 25.102015450679843 26.634129091778018 27.09961014430088 26 19.883515948721808 28.122478060769872 27.192041131789434 24.801964858718886 27 19.539525625966107 30.559995238403676 26.63185332882849 23.26862580680173 28 18.675085822522 27.415766135596957 30.295306501504633 23.613841540376413 29 19.443243347332192 26.21696423726054 29.368020628915843 24.97177178649142 30 20.739377876433075 26.94083191389913 27.406312966421993 24.9134772432458 31 20.90253257404545 28.597937458532975 23.638874932821228 26.86065503460035 32 21.660536694926975 27.65262054103638 24.038533918496178 26.64830884554047 33 20.98516027498219 28.326946608850616 23.023018466941043 27.66487464922615 34 18.84786874799777 26.286287477876957 26.557453386247737 28.308390387877537 35 18.481120795746776 25.955951732818427 25.55856851009301 30.004358961341786 36 20.14540374660605 29.35821734236403 23.67336149444101 26.82301741658891 37 19.413658428988317 29.626582311720007 26.463446870563356 24.496312388728324 38 19.243501383838932 27.478787263430064 26.619074044573445 26.658637308157562 39 20.22960697573862 23.48744916733335 28.696495500116413 27.586448356811623 40 20.689836267608715 22.336263232248612 28.077663036532996 28.896237463609676 41 18.027893851413687 24.5279980113333 25.55699298189718 31.887115155355833 42 19.944261313605384 24.03100639489389 25.240311814535822 30.784420476964904 43 21.081967729681374 24.223921069538562 27.475461148349982 27.21865005243008 44 19.807365419256804 24.41053363139993 27.42539436346035 28.356706585882918 45 20.24203614261681 23.701721001965907 26.49863366693684 29.557609188480438 46 20.266194241619502 25.23768593420944 27.778662796702598 26.717457027468463 47 17.321707102306046 25.447581301631374 29.27926587388422 27.95144572217836 48 17.79489073711962 23.43073015228355 29.92995901876104 28.844420091835786 49 19.29566887298967 22.461430194472698 30.722974877327623 27.519926055210007 50 19.625479441982925 22.079802253705555 28.389967736683726 29.904750567627797 51 17.858437041018004 21.853976545636925 26.3412559060425 33.94633050730258 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 105.0 1 406.5 2 708.0 3 1165.0 4 1622.0 5 1196.5 6 771.0 7 829.0 8 887.0 9 1015.0 10 1143.0 11 1152.0 12 1161.0 13 1158.0 14 1155.0 15 1216.0 16 1277.0 17 1230.5 18 1184.0 19 1228.0 20 1272.0 21 1263.5 22 1255.0 23 1504.0 24 1753.0 25 2335.5 26 3593.5 27 4269.0 28 4856.0 29 5443.0 30 6585.5 31 7728.0 32 8672.5 33 9617.0 34 10952.0 35 12287.0 36 13096.5 37 13906.0 38 15624.0 39 17342.0 40 21284.5 41 25227.0 42 29930.0 43 34633.0 44 38921.0 45 43209.0 46 49788.5 47 56368.0 48 63840.5 49 71313.0 50 66374.5 51 61436.0 52 50783.0 53 40130.0 54 34475.5 55 28821.0 56 27296.5 57 25772.0 58 24913.0 59 24054.0 60 22733.0 61 21412.0 62 18755.0 63 16098.0 64 13799.0 65 11500.0 66 10018.5 67 8537.0 68 7239.5 69 5942.0 70 4767.0 71 3592.0 72 2887.5 73 2183.0 74 1874.0 75 1208.5 76 852.0 77 626.0 78 400.0 79 282.5 80 165.0 81 159.0 82 153.0 83 100.0 84 47.0 85 26.0 86 5.0 87 9.5 88 14.0 89 10.0 90 6.0 91 3.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 571237.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.983688697940906 #Duplication Level Percentage of deduplicated Percentage of total 1 73.1231952741631 29.968582717150444 2 10.907913629871793 8.940930731013843 3 4.137962308154409 5.0876687724364 4 2.2517757889654164 3.691443118100756 5 1.502491975142931 3.078883169020613 6 1.1884607873971873 2.922450416423763 7 0.9220521707920901 2.6452369391702564 8 0.7728339146904408 2.5338867659907236 9 0.6390906966462458 2.3573064744989933 >10 4.4387407591866195 31.59375539328072 >50 0.0783007666834162 2.241856053152059 >100 0.0328075837997361 2.6181580004471234 >500 0.002624606703978888 0.8042356059987534 >1k 0.001749737802652592 1.5156058433155288 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTGC 2645 0.4630302308849042 TruSeq Adapter, Index 16 (95% over 22bp) CTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTGCT 2544 0.44534930335394945 TruSeq Adapter, Index 19 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTGC 1761 0.30827835031694373 TruSeq Adapter, Index 16 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTGC 1504 0.26328826739164307 TruSeq Adapter, Index 16 (95% over 22bp) CCTGTATCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTGC 914 0.16000364122071925 TruSeq Adapter, Index 19 (95% over 21bp) CTGTCACTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTGCT 870 0.15230105893000628 TruSeq Adapter, Index 19 (95% over 22bp) TCCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTG 786 0.13759612910228153 No Hit TCTGTATCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTGC 783 0.13707095303700567 TruSeq Adapter, Index 19 (95% over 21bp) GCTGTATCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTGC 605 0.10591050649730323 TruSeq Adapter, Index 19 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4817615105464107 0.0 2 0.0 0.0 0.0 1.6332975630079984 0.0 3 0.0 0.0 0.0 2.2680603672381165 0.0 4 0.0 0.0 0.0 2.8993219976997286 0.0 5 0.0 0.0 0.0 3.9528251846431517 0.0 6 0.0 0.0 0.0 4.747591630093989 0.0 7 0.0 0.0 0.0 5.759430849192191 0.0 8 0.0 0.0 0.0 7.362443259102614 0.0 9 0.0 0.0 0.0 8.094538694097196 0.0 10 0.0 0.0 0.0 9.404677918272101 0.0 11 0.0 0.0 0.0 11.916419979798228 0.0 12 0.0 0.0 0.0 14.133013092639308 0.0 13 1.7505868842529457E-4 0.0 0.0 14.863708058126488 0.0 14 1.7505868842529457E-4 0.0 0.0 15.120694212734819 0.0 15 1.7505868842529457E-4 0.0 0.0 15.491818632196443 0.0 16 1.7505868842529457E-4 0.0 0.0 16.337001979913765 0.0 17 1.7505868842529457E-4 0.0 0.0 17.51952342022663 0.0 18 1.7505868842529457E-4 0.0 0.0 18.94099997024002 0.0 19 1.7505868842529457E-4 0.0 0.0 19.87528819036582 0.0 20 1.7505868842529457E-4 0.0 0.0 20.759859742978833 0.0 21 1.7505868842529457E-4 0.0 0.0 22.04794157241215 0.0 22 1.7505868842529457E-4 0.0 0.0 23.22258537174588 0.0 23 1.7505868842529457E-4 0.0 0.0 24.355390144545957 0.0 24 1.7505868842529457E-4 0.0 0.0 25.330992215140125 0.0 25 1.7505868842529457E-4 0.0 0.0 26.117881019611826 0.0 26 1.7505868842529457E-4 0.0 0.0 26.79185697004921 0.0 27 1.7505868842529457E-4 0.0 0.0 27.4534037536084 0.0 28 1.7505868842529457E-4 0.0 0.0 28.14751145321469 0.0 29 1.7505868842529457E-4 0.0 0.0 28.88888499869581 0.0 30 1.7505868842529457E-4 0.0 0.0 29.660543697274512 0.0 31 3.5011737685058914E-4 0.0 0.0 30.404017947016737 0.0 32 3.5011737685058914E-4 0.0 0.0 31.11825739579194 0.0 33 3.5011737685058914E-4 0.0 0.0 31.809739215071854 0.0 34 3.5011737685058914E-4 0.0 0.0 32.46866011830466 0.0 35 3.5011737685058914E-4 0.0 0.0 33.163468052664655 0.0 36 3.5011737685058914E-4 0.0 0.0 33.84217058768952 0.0 37 3.5011737685058914E-4 0.0 0.0 34.56778885121237 0.0 38 3.5011737685058914E-4 0.0 0.0 35.250692794759445 0.0 39 3.5011737685058914E-4 0.0 0.0 35.95810495468606 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAG 40 6.8048394E-9 45.000004 1 CAAACGG 20 7.0303027E-4 45.000004 11 TGGACGT 20 7.0303027E-4 45.000004 39 GAATCGC 20 7.0303027E-4 45.000004 16 AACGGGC 20 7.0303027E-4 45.000004 4 ACGGATG 20 7.0303027E-4 45.000004 38 CGAATGT 20 7.0303027E-4 45.000004 29 TCCGTTC 20 7.0303027E-4 45.000004 14 ACTCGTA 20 7.0303027E-4 45.000004 33 GCGATAT 20 7.0303027E-4 45.000004 9 TTACGAG 20 7.0303027E-4 45.000004 1 TTACGAA 20 7.0303027E-4 45.000004 26 TGAATCG 20 7.0303027E-4 45.000004 15 CCACGCG 20 7.0303027E-4 45.000004 14 AATCGCG 20 7.0303027E-4 45.000004 17 ATCTCGC 25 3.888333E-5 45.0 31 CGTTATT 85 0.0 45.0 1 GTAGCGT 25 3.888333E-5 45.0 16 CCGTACG 25 3.888333E-5 45.0 1 CGTAGCA 25 3.888333E-5 45.0 20 >>END_MODULE