##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934160.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1931784 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.85422593830366 33.0 31.0 34.0 30.0 34.0 2 31.986162013972578 33.0 31.0 34.0 30.0 34.0 3 32.07509172868188 33.0 31.0 34.0 30.0 34.0 4 35.63916255647629 37.0 35.0 37.0 33.0 37.0 5 29.58917974266274 37.0 35.0 37.0 0.0 37.0 6 23.825062222277438 35.0 17.0 37.0 0.0 37.0 7 30.397202792858828 35.0 19.0 37.0 17.0 37.0 8 33.9536350854961 35.0 32.0 37.0 32.0 37.0 9 36.739048465045784 37.0 35.0 39.0 33.0 39.0 10 36.938990591080575 39.0 37.0 39.0 34.0 39.0 11 37.065460217084315 39.0 37.0 39.0 34.0 39.0 12 36.94947054121993 39.0 35.0 39.0 33.0 39.0 13 36.81505126867186 39.0 35.0 39.0 33.0 39.0 14 37.68643751061195 40.0 37.0 41.0 32.0 41.0 15 37.5769910093468 40.0 36.0 41.0 32.0 41.0 16 37.94977699370116 40.0 37.0 41.0 33.0 41.0 17 37.93358677781781 40.0 36.0 41.0 33.0 41.0 18 38.012411843146026 40.0 37.0 41.0 33.0 41.0 19 38.000937993067545 40.0 37.0 41.0 33.0 41.0 20 37.75761782890841 40.0 36.0 41.0 33.0 41.0 21 37.756275028678154 40.0 36.0 41.0 33.0 41.0 22 37.880429178417465 40.0 36.0 41.0 33.0 41.0 23 37.7488539091327 40.0 36.0 41.0 33.0 41.0 24 37.747265222198756 40.0 36.0 41.0 33.0 41.0 25 37.57304439833853 39.0 35.0 41.0 33.0 41.0 26 37.440975802677734 39.0 35.0 41.0 33.0 41.0 27 36.53615362794184 39.0 35.0 41.0 31.0 41.0 28 36.89984128660347 39.0 35.0 41.0 31.0 41.0 29 37.11182254330712 39.0 35.0 41.0 31.0 41.0 30 37.10881289005396 39.0 35.0 41.0 32.0 41.0 31 37.13508083719505 39.0 35.0 41.0 32.0 41.0 32 37.010470632327426 39.0 35.0 41.0 32.0 41.0 33 35.801598936527064 39.0 35.0 41.0 30.0 41.0 34 36.05965004369018 39.0 35.0 41.0 29.0 41.0 35 36.274273417732005 39.0 35.0 40.0 30.0 41.0 36 36.26850258621047 39.0 35.0 40.0 30.0 41.0 37 36.32812105287134 39.0 35.0 40.0 30.0 41.0 38 36.37625376336071 39.0 35.0 40.0 30.0 41.0 39 36.32992146119856 39.0 35.0 40.0 31.0 41.0 40 36.31998556774463 39.0 35.0 40.0 30.0 41.0 41 36.1059134975753 38.0 35.0 40.0 30.0 41.0 42 36.154399767261765 38.0 35.0 40.0 30.0 41.0 43 35.94040016896299 38.0 35.0 40.0 30.0 41.0 44 36.13428882318106 38.0 35.0 40.0 31.0 41.0 45 36.123081566055006 38.0 35.0 40.0 31.0 41.0 46 36.05632099655034 38.0 35.0 40.0 31.0 41.0 47 35.95501826291138 38.0 35.0 40.0 30.0 41.0 48 35.94644018171804 38.0 35.0 40.0 31.0 41.0 49 36.00192619878827 38.0 35.0 40.0 31.0 41.0 50 35.790944018585925 38.0 35.0 40.0 30.0 41.0 51 35.155746708741766 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 14.0 10 16.0 11 20.0 12 35.0 13 31.0 14 46.0 15 56.0 16 124.0 17 179.0 18 378.0 19 833.0 20 1944.0 21 4188.0 22 7249.0 23 10323.0 24 13214.0 25 16242.0 26 17938.0 27 19471.0 28 22141.0 29 27216.0 30 36085.0 31 50183.0 32 72648.0 33 113678.0 34 151255.0 35 174397.0 36 227034.0 37 323109.0 38 356030.0 39 285536.0 40 171.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.94547216458983 4.019962894402273 48.77817602796172 18.25638891304618 2 19.54659527152104 11.545286636601194 48.757210951120825 20.15090714075694 3 19.245474649339677 11.552274995548157 48.75798743544827 20.444262919663895 4 17.76135427149205 4.424718291486005 54.318702297979485 23.49522513904246 5 19.38674303131199 21.66903753214645 38.42096217796607 20.52325725857549 6 16.473011475403045 32.98904018254628 37.36732471125136 13.170623630799302 7 77.1897893346254 2.0679330608391 15.738146707913515 5.004130896621983 8 77.59847891896815 7.211831136400343 9.856743818149441 5.33294612648205 9 72.92093733046758 4.217138147950288 11.108850678957896 11.753073842624227 10 45.77597702434641 19.578431128946093 18.554765957270586 16.090825889436914 11 34.164948048021934 20.178394685948327 24.917589130047666 20.739068135982077 12 27.29906656230717 17.800282019107726 29.905155027684255 24.995496390900847 13 28.282561611443104 17.64891934087869 34.401827533513064 19.666691514165144 14 21.495053277177988 22.987766748249285 33.61007234763307 21.90710762693966 15 18.711356963304386 19.973661651613224 38.11357791554335 23.201403469539038 16 23.204975297445262 20.721778418291073 29.739815631561296 26.333430652702372 17 24.433373503455876 22.824912101974135 29.75353352134607 22.98818087322392 18 23.910281894870234 20.753355447606978 30.608132172126908 24.728230485395883 19 24.026702778364456 22.80964124353447 28.162258306311678 25.001397671789395 20 24.93896833186319 26.35941699486071 29.62096176384109 19.08065290943501 21 23.914940800834874 26.167625365982943 30.498130225739523 19.419303607442654 22 21.676647078555366 20.540598741888328 33.75035718279062 24.032396996765684 23 23.28629908933918 23.037875870180102 30.669474433994694 23.006350606486027 24 22.960796859276194 24.702037080750227 27.56255357741859 24.774612482554986 25 23.10801828775888 27.31433742074683 25.11600675851959 24.4616375329747 26 20.71789599665387 22.937347032587493 29.200521383343066 27.144235587415572 27 22.555782634083315 25.1943281443474 28.831018374725126 23.41887084684416 28 19.24288636824821 24.911170192940826 29.483886397236958 26.362057041574005 29 22.980001904974884 24.51076310809076 28.480720411805876 24.028514575128483 30 24.538250653282148 26.50384307976461 28.11308096557379 20.844825301379448 31 24.99264928170023 22.995013935305398 27.78131509526945 24.231021687724922 32 30.085713516625045 24.707368939798652 24.264721107535834 20.94219643604047 33 28.68835232096342 24.266843498030834 24.440258331159175 22.604545849846566 34 26.30004182662244 23.038289995154738 27.97673031767527 22.684937860547556 35 26.60970377640564 25.773171327643258 25.567454746493397 22.049670149457704 36 25.8732342746394 27.07207431058545 26.943022615364864 20.11166879941029 37 25.216483830490365 25.76840889043496 27.877340323762905 21.137766955311772 38 27.176744397924406 22.14222708128859 27.314130358259515 23.366898162527487 39 28.599677810769737 21.834066334538438 26.626320541012866 22.939935313678962 40 28.552053438686727 20.1700604208338 27.673332008133418 23.60455413234606 41 25.11403966489007 22.09160030313948 27.274012001341763 25.520348030628682 42 24.710060752133778 21.238916980366334 31.137642717819386 22.913379549680503 43 22.940090610544452 21.883191909654496 30.892428967213725 24.28428851258733 44 23.974419500316806 21.038842851995877 29.516964629585917 25.469773018101407 45 23.606624757219233 19.97718171389762 27.792289407097275 28.62390412178587 46 26.260803485275787 22.322164382767433 27.809009702948156 23.608022429008628 47 20.912431203488588 23.203732922521358 33.22203724640022 22.661798627589835 48 23.062775134280024 24.08333436864577 28.902972589067925 23.95091790800628 49 25.306659543717103 20.296679131828405 31.7724963039346 22.624165020519893 50 24.02390743478567 21.04738417959772 29.011110973069453 25.91759741254716 51 22.891896816621323 21.139268158344827 27.506232580868257 28.4626024441656 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 426.0 1 1295.0 2 2164.0 3 8418.0 4 14672.0 5 9740.5 6 4809.0 7 4633.0 8 4457.0 9 4590.5 10 4724.0 11 4635.5 12 4547.0 13 4445.0 14 4343.0 15 4321.0 16 4299.0 17 4065.0 18 3831.0 19 3844.5 20 3858.0 21 4362.0 22 4866.0 23 5457.5 24 6049.0 25 6844.0 26 9823.0 27 12007.0 28 14150.5 29 16294.0 30 18626.5 31 20959.0 32 25070.5 33 29182.0 34 33190.5 35 37199.0 36 39180.0 37 41161.0 38 46316.5 39 51472.0 40 57684.0 41 63896.0 42 72848.0 43 81800.0 44 99568.5 45 117337.0 46 171260.5 47 225184.0 48 214140.0 49 203096.0 50 195099.0 51 187102.0 52 168106.0 53 149110.0 54 138202.0 55 127294.0 56 118836.5 57 110379.0 58 102200.5 59 94022.0 60 85161.5 61 76301.0 62 69648.0 63 62995.0 64 57031.0 65 51067.0 66 42950.0 67 34833.0 68 30038.5 69 25244.0 70 20933.5 71 16623.0 72 14133.0 73 11643.0 74 9612.0 75 5820.0 76 4059.0 77 2960.0 78 1861.0 79 1378.0 80 895.0 81 612.5 82 330.0 83 215.5 84 101.0 85 75.0 86 49.0 87 32.5 88 16.0 89 12.0 90 8.0 91 4.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1931784.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.94467158773402 #Duplication Level Percentage of deduplicated Percentage of total 1 74.49944511408184 27.52357533208169 2 10.104132946879092 7.465877468025023 3 3.5394210971935736 3.922882501395413 4 1.8398342397760132 2.7188828705757238 5 1.2544024997924685 2.317174419683267 6 0.9656500378628271 2.1405374110515036 7 0.8355961115478705 2.1609576744786545 8 0.7029741006975996 2.077691782796438 9 0.6361741488830011 2.115292050277981 >10 5.491515899638397 34.42368179714158 >50 0.0812525051942603 2.0764802026723443 >100 0.04062908522415461 2.767703094417908 >500 0.004062889009262243 1.0245719185704005 >1k 0.003893601967209649 3.1533324113295707 >5k 5.078611261577804E-4 1.0955577034304547 >10k+ 5.078611261577804E-4 3.0158013620720743 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGC 18474 0.9563180976755166 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCG 15318 0.7929457951820701 No Hit GAATCTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCGTCTTC 14428 0.7468743917539435 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAATGGGGTT 6859 0.3550604001275505 No Hit GAATCAGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCGTCTTC 5522 0.28584976374170196 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5136 0.26586823371557067 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCGTC 4856 0.25137385960335107 No Hit GAATGACTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCGTCT 4308 0.2230062988408642 No Hit GCTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCGTCTTCTGC 4185 0.21663912735585344 No Hit GAACTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCGTCTTCT 3822 0.19784820663179734 No Hit CTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCGTCTTCTGCT 3456 0.17890198904225316 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCGTCTTCTGC 3240 0.16772061472711236 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAATGGGGTTCGTA 3120 0.16150874010758967 No Hit CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2248 0.11636911787239153 No Hit GAATAATACGGCTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGC 2085 0.10793132151420655 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.176562182935566E-5 0.0 0.0 0.19117044141581047 0.0 2 5.176562182935566E-5 0.0 0.0 0.7118290657754697 0.0 3 5.176562182935566E-5 0.0 0.0 0.9902763455955739 0.0 4 5.176562182935566E-5 0.0 0.0 1.5175092039275613 0.0 5 5.176562182935566E-5 0.0 0.0 2.9354213514554424 0.0 6 5.176562182935566E-5 0.0 0.0 3.716823412969566 0.0 7 5.176562182935566E-5 0.0 0.0 4.843088047110857 0.0 8 5.176562182935566E-5 0.0 0.0 6.316027050643343 0.0 9 5.176562182935566E-5 0.0 0.0 6.992189602978387 0.0 10 5.176562182935566E-5 0.0 0.0 9.000643964335557 0.0 11 5.176562182935566E-5 0.0 0.0 10.742608904515205 0.0 12 5.176562182935566E-5 0.0 0.0 13.338913667366539 0.0 13 5.176562182935566E-5 0.0 0.0 13.9220016316524 0.0 14 5.176562182935566E-5 0.0 0.0 14.245588533707702 0.0 15 5.176562182935566E-5 0.0 0.0 14.726801754233392 0.0 16 5.176562182935566E-5 0.0 0.0 15.336497248139544 0.0 17 5.176562182935566E-5 0.0 0.0 16.036057861541455 0.0 18 5.176562182935566E-5 0.0 0.0 16.76046597342146 0.0 19 5.176562182935566E-5 0.0 0.0 17.790860675934784 0.0 20 5.176562182935566E-5 0.0 0.0 18.441606307951613 0.0 21 5.176562182935566E-5 0.0 0.0 19.236208603032225 0.0 22 5.176562182935566E-5 0.0 0.0 20.111617033788455 0.0 23 5.176562182935566E-5 0.0 0.0 20.873037565276448 0.0 24 5.176562182935566E-5 0.0 0.0 21.5118253386507 0.0 25 1.5529686548806698E-4 0.0 0.0 22.055933789699054 0.0 26 1.5529686548806698E-4 0.0 0.0 22.563185118004913 0.0 27 2.0706248731742265E-4 0.0 0.0 23.14891312900407 0.0 28 2.0706248731742265E-4 0.0 0.0 23.66574109734836 0.0 29 2.0706248731742265E-4 0.0 0.0 24.270932982155355 0.0 30 2.0706248731742265E-4 0.0 0.0 24.90925486493314 0.0 31 2.0706248731742265E-4 0.0 0.0 25.45486451901455 0.0 32 2.588281091467783E-4 0.0 0.0 25.97474665904677 0.0 33 2.588281091467783E-4 0.0 0.0 26.500374783102046 0.0 34 2.588281091467783E-4 0.0 0.0 27.083618044253395 0.0 35 2.588281091467783E-4 0.0 0.0 27.701181912677608 0.0 36 2.588281091467783E-4 0.0 0.0 28.24233972328169 0.0 37 2.588281091467783E-4 0.0 0.0 28.814039250765095 0.0 38 2.588281091467783E-4 0.0 0.0 29.505369130296142 0.0 39 2.588281091467783E-4 0.0 0.0 30.73951332032981 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTATCG 25 3.8917948E-5 45.0 16 CGATCGA 370 0.0 45.0 41 CGTTATT 875 0.0 43.45714 1 CCGATCG 410 0.0 42.80488 40 CGTTTAT 1140 0.0 42.23684 1 CCGATGA 3115 0.0 41.5329 18 TACGGCT 2860 0.0 41.066433 7 AATACGG 1005 0.0 40.97015 5 TAGGGCG 815 0.0 40.58282 5 CCGCGTA 50 1.0822987E-9 40.5 40 TTATGGG 4585 0.0 40.485275 3 TATGGGC 1340 0.0 40.466415 4 GATGAAT 3565 0.0 40.203365 20 TCGTTAG 280 0.0 40.178574 1 TAGGGAT 1340 0.0 40.130596 5 TAATACG 1040 0.0 40.02404 4 CGATGAA 3310 0.0 39.969788 19 GTTTACG 255 0.0 39.705883 1 TTACGGG 1655 0.0 39.561935 3 TATGGGA 2205 0.0 39.183674 4 >>END_MODULE