SRR2934159.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934159.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	943089
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGC	4405	0.46708210995992955	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCG	3945	0.4183062256054307	No Hit
CCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTGC	3492	0.37027258296936977	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTC	2995	0.3175734209602699	No Hit
CTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTGCT	2466	0.2614811539525962	No Hit
GCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTGC	2393	0.25374063317459966	No Hit
TCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTGC	1851	0.1962699172612553	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCCATCAAT	1686	0.17877421961235895	No Hit
CCTGTATCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTGC	1323	0.14028368478478703	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTC	1029	0.10910953261038989	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1004	0.1064586693302541	No Hit
GAATCAGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTC	991	0.10508022042458347	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACGCGG	20	7.032641E-4	45.000004	1
ATTGCGA	20	7.032641E-4	45.000004	11
GGTACGT	25	3.8902712E-5	45.0	25
TCGTTAG	100	0.0	45.0	1
AACGTAG	30	2.1650867E-6	44.999996	36
ATTACGG	30	2.1650867E-6	44.999996	2
CATACGA	110	0.0	42.954544	18
ACATACG	110	0.0	42.954544	17
TAATACG	175	0.0	42.42857	4
AATACGG	160	0.0	42.187504	5
CGTTTAT	325	0.0	40.846153	1
CGTTAGG	215	0.0	40.813953	2
CGATGAA	425	0.0	40.764706	19
TAGGGCG	345	0.0	39.782608	5
AGGGCGA	510	0.0	39.705883	6
ACGGGAG	410	0.0	39.512196	5
CTAGGGA	1065	0.0	39.507042	4
TATGGGA	1220	0.0	39.467213	4
CGCACGG	120	0.0	39.374996	2
CACGGGA	315	0.0	39.285713	4