SRR2934156.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934156.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	916252
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGC	3536	0.3859200307339029	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCG	2980	0.32523803495108333	No Hit
CCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCTGC	2230	0.24338282481238785	No Hit
GAATCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTC	2207	0.24087259836813452	No Hit
CTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCTGCT	1904	0.20780309347210157	No Hit
GCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCTGC	1584	0.17287820381292485	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTAGGATCGT	1315	0.1435194684431794	No Hit
TCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCTGC	1130	0.12332851660896785	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	937	0.10226444253327686	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCGTAG	30	2.1650176E-6	45.000004	1
AACCCGA	30	2.1650176E-6	45.000004	24
AACGGTT	20	7.032535E-4	45.000004	40
ACCCGTC	30	2.1650176E-6	45.000004	39
TACCGAA	20	7.032535E-4	45.000004	23
ACGGTAT	20	7.032535E-4	45.000004	19
TATTACG	25	3.8901835E-5	45.0	1
CGATCGA	25	3.8901835E-5	45.0	41
TCGTTAG	110	0.0	42.954544	1
TACGGGT	95	0.0	42.63158	4
TAATACG	170	0.0	42.35294	4
AATACGG	175	0.0	41.142857	5
GTCGAAT	55	6.002665E-11	40.909092	43
ATACGGA	55	6.002665E-11	40.909092	4
CGTTTAT	195	0.0	40.384617	1
TATGGGA	1250	0.0	40.32	4
AGACACG	330	0.0	40.227276	24
ACACGTG	325	0.0	40.153847	42
TTATGGG	2250	0.0	40.1	3
CGATGAA	485	0.0	39.896908	19