SRR2934152.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934152.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	639453
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGC	6106	0.9548786228229441	No Hit
CTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGCT	4100	0.6411730025506175	No Hit
TCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGC	3218	0.5032426151726553	No Hit
GCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGC	2670	0.4175443699536948	No Hit
CCTGTATCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGC	2067	0.3232450234810064	No Hit
CTGTCACTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGCT	1536	0.24020530046774355	No Hit
TCCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTG	1251	0.19563595760751767	No Hit
TCTGTATCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGC	1172	0.18328164853398138	No Hit
CGCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTG	1080	0.16889435189138216	No Hit
GCTGTATCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGC	985	0.1540379042713069	No Hit
CCTGACTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGC	961	0.1502846964514984	No Hit
GCCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTG	782	0.12229202146209338	No Hit
TTCCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCT	723	0.11306538557173083	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCC	687	0.1074355738420181	No Hit
CTGTATCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGCT	687	0.1074355738420181	No Hit
TGCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTG	646	0.10102384381651193	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCGTAG	30	2.1639844E-6	45.000004	1
AAACGGG	30	2.1639844E-6	45.000004	22
GTCCATA	65	0.0	45.000004	22
TGCGTAG	35	1.2107921E-7	45.000004	1
GCATAAC	20	7.030937E-4	45.0	30
CCGATTA	25	3.8888575E-5	45.0	12
CCGATAA	20	7.030937E-4	45.0	15
ACCGCTA	20	7.030937E-4	45.0	11
ACCGAAC	25	3.8888575E-5	45.0	11
CAACCCG	20	7.030937E-4	45.0	23
ACACAAT	20	7.030937E-4	45.0	10
CGACCAT	20	7.030937E-4	45.0	13
TCGGCGT	50	2.1827873E-11	45.0	4
CTAACCG	20	7.030937E-4	45.0	15
CACTCGC	25	3.8888575E-5	45.0	22
TGACCAC	40	6.8066583E-9	45.0	24
TCTACGT	20	7.030937E-4	45.0	41
ACGGCAA	20	7.030937E-4	45.0	27
TGATTCG	20	7.030937E-4	45.0	11
GCGGGTA	40	6.8066583E-9	45.0	5