##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934150.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1882927 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.849970816712492 31.0 31.0 34.0 30.0 34.0 2 32.071653866559885 33.0 31.0 34.0 30.0 34.0 3 32.15300115192995 33.0 31.0 34.0 30.0 34.0 4 35.61437432253083 37.0 35.0 37.0 33.0 37.0 5 29.168041033985915 37.0 33.0 37.0 0.0 37.0 6 23.385105211195125 35.0 10.0 37.0 0.0 37.0 7 30.23153951268424 35.0 19.0 37.0 17.0 37.0 8 34.175890515139464 35.0 32.0 37.0 32.0 37.0 9 36.78559179405256 37.0 37.0 39.0 34.0 39.0 10 36.882557847436466 39.0 37.0 39.0 33.0 39.0 11 37.036434232447675 39.0 37.0 39.0 34.0 39.0 12 36.94503557493201 39.0 35.0 39.0 33.0 39.0 13 36.80225415005467 39.0 35.0 39.0 33.0 39.0 14 37.53697514561106 40.0 37.0 41.0 32.0 41.0 15 37.510133956335004 40.0 36.0 41.0 32.0 41.0 16 37.847033899880344 40.0 36.0 41.0 33.0 41.0 17 37.937232298437486 40.0 36.0 41.0 33.0 41.0 18 38.00868063392792 40.0 37.0 41.0 33.0 41.0 19 38.03654416767087 40.0 37.0 41.0 33.0 41.0 20 37.94226170212653 40.0 37.0 41.0 33.0 41.0 21 37.83238808514616 40.0 36.0 41.0 33.0 41.0 22 37.9816519705756 40.0 36.0 41.0 34.0 41.0 23 37.96450420010972 40.0 36.0 41.0 34.0 41.0 24 37.93312592575283 40.0 36.0 41.0 34.0 41.0 25 37.695560688226365 39.0 36.0 41.0 33.0 41.0 26 37.60951539810094 39.0 36.0 41.0 33.0 41.0 27 36.73703760156395 39.0 35.0 41.0 32.0 41.0 28 37.130606762768814 39.0 35.0 41.0 32.0 41.0 29 37.41065213893051 39.0 35.0 41.0 32.0 41.0 30 37.432785763866576 39.0 35.0 41.0 33.0 41.0 31 37.40974928927144 39.0 35.0 41.0 33.0 41.0 32 37.47030925787351 39.0 35.0 41.0 33.0 41.0 33 36.287270828874405 39.0 35.0 41.0 31.0 41.0 34 36.762574969714706 39.0 35.0 41.0 31.0 41.0 35 37.09510777635033 39.0 35.0 41.0 31.0 41.0 36 37.25134803420419 39.0 35.0 41.0 32.0 41.0 37 37.31288148717396 39.0 35.0 41.0 33.0 41.0 38 37.23974110520482 39.0 35.0 41.0 33.0 41.0 39 37.25618571511269 39.0 35.0 41.0 33.0 41.0 40 37.19564964547218 39.0 35.0 41.0 33.0 41.0 41 37.1026901202224 39.0 35.0 40.0 32.0 41.0 42 37.19216570796425 39.0 35.0 41.0 33.0 41.0 43 37.09190159788457 39.0 35.0 40.0 32.0 41.0 44 37.127801024681254 39.0 35.0 40.0 33.0 41.0 45 37.0795702648058 39.0 35.0 40.0 33.0 41.0 46 37.060096859835774 39.0 35.0 40.0 33.0 41.0 47 37.01566125505662 39.0 35.0 40.0 33.0 41.0 48 36.96238037905877 39.0 35.0 40.0 32.0 41.0 49 37.02759958298967 39.0 35.0 40.0 33.0 41.0 50 36.94688057476471 39.0 35.0 40.0 32.0 41.0 51 36.239246662244476 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 19.0 10 23.0 11 20.0 12 20.0 13 20.0 14 35.0 15 56.0 16 90.0 17 147.0 18 281.0 19 478.0 20 766.0 21 1302.0 22 2122.0 23 3274.0 24 5154.0 25 7504.0 26 10106.0 27 13273.0 28 17290.0 29 23489.0 30 32618.0 31 47421.0 32 69387.0 33 111720.0 34 146921.0 35 165670.0 36 224257.0 37 334197.0 38 366199.0 39 298925.0 40 140.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.841710273420052 4.4082431236048985 54.2446945633049 17.505352039670154 2 20.369881572679134 4.102495742001682 52.87082292622072 22.65679975909847 3 22.01885681176169 4.024532018500983 51.2612544193163 22.69535675042102 4 20.557302540140963 4.57452678728384 49.1297857006671 25.738384971908097 5 14.872429998613859 23.127503084293764 40.598440619312385 21.40162629778 6 16.65295574390298 29.488344476445448 39.50115963072387 14.357540148927706 7 81.1683618111589 2.2088482453116876 10.787088400134472 5.835701543394937 8 81.19103927024256 2.553205727040931 9.388627387041558 6.867127615674957 9 75.34322891965542 5.136842798472803 12.511584357757895 7.008343924113893 10 41.34222941197402 22.587864532188448 19.540268953602556 16.52963710223498 11 29.915339256381156 22.24541896738429 26.375956157620557 21.463285618613998 12 27.456242329097197 19.07243350379489 31.880418093744474 21.59090607336344 13 26.554879716526454 20.30514194124361 33.664289693652485 19.475688648577457 14 20.274232617621397 22.01216510252389 36.36540343837015 21.34819884148456 15 17.949394745521204 22.97624921199813 37.056136536360675 22.018219506119994 16 22.98368444448457 22.801043269335455 30.6549324535683 23.560339832611675 17 23.718763393376378 22.435495375019848 28.49855570608951 25.347185525514266 18 23.266435714183288 21.830957865068587 31.861245815690147 23.041360605057974 19 24.016650672065353 23.720356657480615 29.62186000838057 22.641132662073463 20 22.77321425631477 27.96927337066174 29.63657114694303 19.62094122608046 21 22.566621010798613 24.770742572601062 32.72776905318156 19.93486736341876 22 20.694748123533202 22.56380624421446 32.451762601524116 24.289683030728224 23 20.333714477512935 23.07184505825239 31.547001025530996 25.047439438703677 24 22.36756921537585 24.461065139540725 28.400888616499735 24.77047702858369 25 22.672413747319997 24.170931746159038 25.847948433476176 27.308706073044785 26 19.674315573572425 23.621680500624826 28.008202123608616 28.695801802194136 27 19.593643301094517 24.966767166225775 31.411732903081212 24.027856629598492 28 19.12102805897414 22.465979828214262 29.92994417733667 28.483047935474925 29 20.09106035443753 24.082186935553 28.80010749221823 27.026645217791234 30 23.10248883785723 22.266768706381075 28.98922794139125 25.641514514370446 31 21.670941040199647 24.481087158450645 28.18967490508129 25.658296896268418 32 22.545855468640045 24.65746149478976 27.10375920043634 25.692923836133847 33 22.46247464718494 23.732837226297143 28.228709875635115 25.5759782508828 34 19.532143306670942 21.525900897910542 30.770815862749856 28.17113993266866 35 18.525572154417034 23.609518584629143 29.03006861126321 28.834840649690612 36 22.434539416557307 21.738601655826276 29.583993431503185 26.242865496113232 37 21.05036467159906 25.04749254750715 30.27493896470761 23.62720381618618 38 22.32433864934753 25.257378538838733 28.005334248220986 24.412948563592746 39 20.119314237886016 22.43746040074841 29.07855694883551 28.364668412530065 40 21.343259722761424 20.037048701303874 30.148593121241557 28.471098454693145 41 19.02314853417047 20.577324559050883 30.285985595830322 30.113541310948328 42 19.605061693841556 20.001306476565475 34.296549999017486 26.09708183057548 43 21.15674160495866 20.067692480908715 33.28551770727171 25.490048206860916 44 21.092426843950935 20.24146448587757 29.93711386580574 28.728994804365755 45 20.53552793071638 19.35465368545886 27.560335583907396 32.549482799917364 46 20.87117556867579 19.410895908338453 31.504620200358275 28.213308322627483 47 17.109372800963605 21.360413866283718 34.905176886836294 26.625036445916383 48 17.79978724613328 22.95558988744651 32.51459031603456 26.73003255038565 49 21.49892162574545 19.314715865245972 33.29528972711103 25.891072781897545 50 19.920687312891047 19.697099250263022 29.92558925545175 30.456624181394183 51 18.10834939432065 19.499906262961865 28.35903887936176 34.032705463355725 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 420.0 1 1142.5 2 1865.0 3 3561.5 4 5258.0 5 3787.5 6 2317.0 7 2328.0 8 2339.0 9 2553.0 10 2767.0 11 2837.0 12 2907.0 13 2847.0 14 2787.0 15 2909.0 16 3031.0 17 2911.5 18 2792.0 19 3244.5 20 3697.0 21 4118.5 22 4540.0 23 5311.5 24 6083.0 25 7552.5 26 10733.0 27 12444.0 28 13995.0 29 15546.0 30 18831.0 31 22116.0 32 26115.5 33 30115.0 34 34150.0 35 38185.0 36 41006.5 37 43828.0 38 49180.5 39 54533.0 40 62245.5 41 69958.0 42 81590.5 43 93223.0 44 109762.0 45 126301.0 46 157284.0 47 188267.0 48 221675.0 49 255083.0 50 245175.5 51 235268.0 52 200268.0 53 165268.0 54 143835.5 55 122403.0 56 109843.5 57 97284.0 58 86563.0 59 75842.0 60 64866.0 61 53890.0 62 47381.5 63 40873.0 64 35824.5 65 30776.0 66 26272.5 67 21769.0 68 18532.5 69 15296.0 70 12704.0 71 10112.0 72 8619.5 73 7127.0 74 5609.0 75 2921.5 76 1752.0 77 1333.5 78 915.0 79 698.5 80 482.0 81 349.0 82 216.0 83 150.0 84 84.0 85 61.0 86 38.0 87 26.5 88 15.0 89 8.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1882927.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.03774729362539 #Duplication Level Percentage of deduplicated Percentage of total 1 68.76719210326918 25.46981883213075 2 13.47658079233735 9.98284387537433 3 5.373916837694391 5.9711332143444995 4 2.719436827359886 4.028872559709352 5 1.6355164301411762 3.02879221170706 6 1.0883817148927204 2.4186724149119527 7 0.8148584115270416 2.1126363948356497 8 0.6616459101058734 1.9604699213089691 9 0.5497700466818747 1.8326019652747116 >10 4.725316466530641 31.088281532142346 >50 0.11290517641929868 2.9317666132686897 >100 0.06646897679929492 4.6514515430795464 >500 0.004942529382972494 1.207187031175748 >1k 0.0025564807153306 1.9149354621286074 >5k 5.112961430661201E-4 1.4005364286078392 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 8848 0.46990669314317546 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGCT 7592 0.40320203597909 TruSeq Adapter, Index 16 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 5747 0.3052162935684708 TruSeq Adapter, Index 13 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 4879 0.25911785215252636 TruSeq Adapter, Index 13 (95% over 21bp) CCTGTATCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 3015 0.16012304247588993 TruSeq Adapter, Index 16 (95% over 22bp) CTGTCACTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGCT 2803 0.14886397613927677 TruSeq Adapter, Index 16 (95% over 23bp) TCTGTATCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 2507 0.13314377031079802 TruSeq Adapter, Index 16 (95% over 22bp) GCTGTATCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 2255 0.11976035183520126 TruSeq Adapter, Index 16 (95% over 22bp) TCCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTG 2229 0.1183795229448619 TruSeq Adapter, Index 16 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5932641042377109E-4 0.0 0.0 0.4336864891735049 0.0 2 1.5932641042377109E-4 0.0 0.0 1.5584247291583795 0.0 3 1.5932641042377109E-4 0.0 0.0 2.160306798935912 0.0 4 1.5932641042377109E-4 0.0 0.0 2.809349486198881 0.0 5 1.5932641042377109E-4 0.0 0.0 3.9036032729893404 0.0 6 1.5932641042377109E-4 0.0 0.0 4.761310449103974 0.0 7 1.5932641042377109E-4 0.0 0.0 5.89114713422241 0.0 8 1.5932641042377109E-4 0.0 0.0 7.606508377648204 0.0 9 2.1243521389836145E-4 0.0 0.0 8.359697428524845 0.0 10 2.1243521389836145E-4 0.0 0.0 9.832404548875235 0.0 11 2.1243521389836145E-4 0.0 0.0 12.794282518653139 0.0 12 2.1243521389836145E-4 0.0 0.0 15.351152753133817 0.0 13 2.655440173729518E-4 0.0 0.0 16.170727808353696 0.0 14 2.655440173729518E-4 0.0 0.0 16.4848663809059 0.0 15 2.655440173729518E-4 0.0 0.0 16.917915564437706 0.0 16 2.655440173729518E-4 0.0 0.0 17.943499668335523 0.0 17 2.655440173729518E-4 0.0 0.0 19.25746457510036 0.0 18 2.655440173729518E-4 0.0 0.0 20.67796574163523 0.0 19 2.655440173729518E-4 0.0 0.0 21.71470269426271 0.0 20 2.655440173729518E-4 0.0 0.0 22.833067877830633 0.0 21 2.655440173729518E-4 0.0 0.0 24.363344941147478 0.0 22 2.655440173729518E-4 0.0 0.0 25.87168806862932 0.0 23 2.655440173729518E-4 0.0 0.0 27.220970329704762 0.0 24 2.655440173729518E-4 0.0 0.0 28.268116607813262 0.0 25 2.655440173729518E-4 0.0 0.0 29.178348390564267 0.0 26 2.655440173729518E-4 0.0 0.0 30.020707122474743 0.0 27 2.655440173729518E-4 0.0 0.0 30.93747128805312 0.0 28 2.655440173729518E-4 0.0 0.0 31.81950229615912 0.0 29 2.655440173729518E-4 0.0 0.0 32.82761360371379 0.0 30 2.655440173729518E-4 0.0 0.0 33.90731557835221 0.0 31 2.655440173729518E-4 0.0 0.0 34.79359529073618 0.0 32 2.655440173729518E-4 0.0 0.0 35.635582261022336 0.0 33 2.655440173729518E-4 0.0 0.0 36.437153431864324 0.0 34 2.655440173729518E-4 0.0 0.0 37.366132622241864 0.0 35 2.655440173729518E-4 0.0 0.0 38.34269730053263 0.0 36 2.655440173729518E-4 0.0 0.0 39.216177791279215 0.0 37 2.655440173729518E-4 0.0 0.0 40.09820879938521 0.0 38 2.655440173729518E-4 0.0 0.0 41.13579549286828 0.0 39 2.655440173729518E-4 0.0 0.0 42.99885231875692 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGATCG 20 7.0344337E-4 45.000004 2 TCGTCAA 20 7.0344337E-4 45.000004 10 TATTCGA 25 3.8917573E-5 45.0 15 GCGTTAG 195 0.0 43.846153 1 CGTTAGG 510 0.0 42.794117 2 TATGGGA 2240 0.0 42.287945 4 ACGGGTA 160 0.0 42.187504 5 CTCGTAG 150 0.0 42.0 1 CCGTTAG 65 0.0 41.538464 1 CGTTTAT 475 0.0 41.210526 1 TTATGGG 4645 0.0 41.02799 3 TTAGGGA 2960 0.0 40.971283 4 TAGGGAC 1265 0.0 40.55336 5 TAGGGCG 785 0.0 40.414013 5 TACGGGT 245 0.0 40.408165 4 CGGGTAC 225 0.0 40.0 6 TTACGGG 1780 0.0 39.69101 3 TAGGGAG 1425 0.0 39.63158 5 AGGGCGA 885 0.0 39.40678 6 GTATGGG 1835 0.0 39.359673 3 >>END_MODULE