##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934149.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1272990 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.016184730437786 33.0 31.0 34.0 30.0 34.0 2 32.22022403946614 33.0 31.0 34.0 30.0 34.0 3 32.30473138045075 34.0 31.0 34.0 30.0 34.0 4 35.72931444866024 37.0 35.0 37.0 35.0 37.0 5 29.59319633304268 37.0 35.0 37.0 0.0 37.0 6 23.674298305564065 35.0 10.0 37.0 0.0 37.0 7 30.411396790234015 35.0 19.0 37.0 17.0 37.0 8 34.323763737342794 35.0 32.0 37.0 32.0 37.0 9 37.00267637609094 38.0 37.0 39.0 34.0 39.0 10 37.00528362359484 39.0 37.0 39.0 34.0 39.0 11 37.19258046017644 39.0 37.0 39.0 34.0 39.0 12 37.22065530758294 39.0 37.0 39.0 34.0 39.0 13 37.19805968625048 39.0 37.0 39.0 34.0 39.0 14 38.347390788615776 40.0 38.0 41.0 34.0 41.0 15 38.21358141069451 40.0 38.0 41.0 33.0 41.0 16 38.431866707515375 40.0 38.0 41.0 34.0 41.0 17 38.420488770532366 40.0 38.0 41.0 34.0 41.0 18 38.47392516830454 40.0 38.0 41.0 34.0 41.0 19 38.495840501496474 40.0 38.0 41.0 34.0 41.0 20 38.45685904838216 40.0 38.0 41.0 34.0 41.0 21 38.35018342642126 40.0 37.0 41.0 34.0 41.0 22 38.412484779927574 40.0 38.0 41.0 34.0 41.0 23 38.363273081485325 40.0 37.0 41.0 34.0 41.0 24 38.345000353498456 40.0 37.0 41.0 34.0 41.0 25 38.11964901531041 40.0 37.0 41.0 34.0 41.0 26 37.99325760610845 40.0 37.0 41.0 34.0 41.0 27 37.13201360576281 40.0 36.0 41.0 33.0 41.0 28 37.50112255398707 40.0 36.0 41.0 33.0 41.0 29 37.73969866220473 40.0 36.0 41.0 33.0 41.0 30 37.77074211109278 40.0 36.0 41.0 33.0 41.0 31 37.80038963385415 40.0 37.0 41.0 33.0 41.0 32 37.76809401487836 40.0 36.0 41.0 33.0 41.0 33 36.58751364896818 40.0 36.0 41.0 31.0 41.0 34 37.08138948459925 40.0 36.0 41.0 31.0 41.0 35 37.356372791616586 40.0 36.0 41.0 31.0 41.0 36 37.49427646721498 40.0 36.0 41.0 33.0 41.0 37 37.56968554348424 40.0 36.0 41.0 33.0 41.0 38 37.474531614545285 40.0 36.0 41.0 33.0 41.0 39 37.45093205759668 40.0 36.0 41.0 33.0 41.0 40 37.4613233411103 40.0 36.0 41.0 33.0 41.0 41 37.40096230135351 40.0 36.0 41.0 33.0 41.0 42 37.471890588299985 40.0 36.0 41.0 33.0 41.0 43 37.335494387230064 39.0 35.0 41.0 33.0 41.0 44 37.3279381613367 39.0 35.0 41.0 33.0 41.0 45 37.21203073079914 39.0 35.0 41.0 32.0 41.0 46 37.118869747602105 39.0 35.0 41.0 32.0 41.0 47 37.03091618944375 39.0 35.0 40.0 32.0 41.0 48 36.90209428196608 39.0 35.0 40.0 32.0 41.0 49 36.85176081508889 39.0 35.0 40.0 32.0 41.0 50 36.71587129513979 39.0 35.0 40.0 32.0 41.0 51 35.94139938255603 37.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 3.0 10 7.0 11 9.0 12 12.0 13 13.0 14 21.0 15 29.0 16 44.0 17 86.0 18 125.0 19 265.0 20 456.0 21 809.0 22 1460.0 23 2220.0 24 3228.0 25 4636.0 26 6060.0 27 8000.0 28 9978.0 29 13445.0 30 18657.0 31 26450.0 32 38221.0 33 61071.0 34 85225.0 35 113033.0 36 151536.0 37 228178.0 38 267816.0 39 231753.0 40 142.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.490365203183057 4.2062388549792225 54.58432509289154 17.71907084894618 2 18.925914579061896 5.248980746117408 54.04009458047588 21.785010094344813 3 20.532761451386104 5.150393954390844 52.519894107573506 21.796950486649543 4 18.866683948813424 4.38235964147401 52.617852457599824 24.13310395211274 5 15.549690099686565 22.11376365878758 41.14737743422965 21.18916880729621 6 15.96045530601183 30.28287732032459 40.02953675991171 13.727130613751875 7 83.55996512148563 1.7829676588190009 9.840611473774343 4.81645574592102 8 85.41732456657162 2.745504677962906 6.900054203096646 4.937116552368832 9 80.79309342571428 4.256042859723957 9.020966386224558 5.929897328337222 10 37.3350144148815 28.505565636807827 17.397858584906402 16.76156136340427 11 27.592204180708414 26.558574694223836 25.371919653728625 20.47730147133913 12 24.589038405643407 22.415572785332174 31.262303710162687 21.733085098861736 13 23.484866338305878 22.541261125381975 32.87464944736408 21.099223088948065 14 19.720264888176654 25.370976991178253 32.19396853078186 22.714789589863233 15 17.763297433601206 25.114886998326774 34.792496406099026 22.329319161972993 16 20.617522525707194 24.497600138257177 31.654372775905543 23.23050456013009 17 20.989560012254614 24.61378329759071 29.730084289743047 24.666572400411628 18 21.315799809896387 23.987305477654967 31.435046622518637 23.261848089930005 19 22.86632259483578 24.906794240331816 29.496853863738124 22.730029301094273 20 24.443868372885884 26.377662039764648 29.350662613217697 19.827806974131768 21 24.079057965891327 25.920549258046016 29.463625008837464 20.536767767225193 22 22.530027729990024 23.66562188234 29.478550499218375 24.3257998884516 23 21.90472823824225 25.00443836950801 29.148225830524982 23.942607561724756 24 22.3752739613037 24.018727562667422 29.70816738544686 23.897831090582017 25 21.828529682087055 25.59666611678018 27.92362862237724 24.651175578755527 26 22.4560287197857 26.143017619934174 27.717813965545684 23.683139694734447 27 22.44754475683234 26.700681073692646 28.092050998043977 22.75972317143104 28 21.05617483248101 24.6937525039474 30.569211070000552 23.68086159357104 29 22.13348101713289 23.01204251408102 30.243599714059027 24.61087675472706 30 23.474968381526956 24.182515180794823 29.126151815803738 23.216364621874487 31 23.659494575762572 26.441684537977515 26.94852276922835 22.950298117031558 32 23.335454324071677 26.223693823203636 28.06196435164455 22.378887501080133 33 22.612275037510113 27.593225398471315 26.01599384127134 23.778505722747234 34 22.25382760273058 25.281502604105295 28.332822724451884 24.131847068712243 35 22.357834704121792 24.632165217322996 28.628033213143862 24.381966865411353 36 25.301769848938328 25.67679243356193 26.541292547466988 22.48014517003276 37 23.08855529108634 26.311282885175846 28.86377740594977 21.73638441778804 38 22.022168280976285 26.146238383647948 28.387497152373548 23.444096183002223 39 21.411558613971827 25.24536720634098 28.963856746714427 24.379217432972766 40 22.302139058437223 24.158477285760295 29.387583563107327 24.15180009269515 41 20.590106756533828 26.190386413090437 28.236749699526314 24.982757130849418 42 22.39656242389964 25.111901900250594 28.746965804915988 23.744569870933784 43 23.360513436869105 24.361071178878074 28.620806133590992 23.657609250661828 44 22.985019520970315 22.966244825175373 28.219624663194526 25.829110990659785 45 23.17638001869614 22.230261038971243 27.684506555432485 26.908852386900133 46 24.080236294079292 23.049749016095962 29.102113920769213 23.76790076905553 47 20.993959104156357 24.602707012623824 31.007392045499177 23.395941837720642 48 21.41077306184652 23.966252680696627 30.340379735897375 24.282594521559478 49 22.410231030880055 22.219184754004353 31.46049851137872 23.910085703736872 50 22.017297857799353 22.47684585110645 29.637781915018973 25.868074376075224 51 20.959709031492785 22.592164903102148 27.907524803808357 28.540601261596716 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 291.0 1 696.5 2 1102.0 3 2162.5 4 3223.0 5 2360.0 6 1497.0 7 1540.0 8 1583.0 9 1714.5 10 1846.0 11 1852.5 12 1859.0 13 1808.0 14 1757.0 15 1709.0 16 1661.0 17 1854.5 18 2048.0 19 2381.5 20 2715.0 21 3170.5 22 3626.0 23 4529.0 24 5432.0 25 6690.5 26 10165.5 27 12382.0 28 14386.5 29 16391.0 30 19276.0 31 22161.0 32 25736.0 33 29311.0 34 32539.5 35 35768.0 36 38609.0 37 41450.0 38 45275.0 39 49100.0 40 54677.0 41 60254.0 42 67102.5 43 73951.0 44 82790.5 45 91630.0 46 108215.0 47 124800.0 48 133196.5 49 141593.0 50 135136.5 51 128680.0 52 111876.0 53 95072.0 54 82864.0 55 70656.0 56 64821.0 57 58986.0 58 54425.0 59 49864.0 60 45349.0 61 40834.0 62 35454.0 63 30074.0 64 26582.0 65 23090.0 66 19107.5 67 15125.0 68 12619.5 69 10114.0 70 8158.5 71 6203.0 72 5151.5 73 4100.0 74 3134.0 75 1749.5 76 1331.0 77 1044.5 78 758.0 79 558.5 80 359.0 81 257.0 82 155.0 83 94.5 84 34.0 85 20.0 86 6.0 87 3.0 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1272990.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.88059614505861 #Duplication Level Percentage of deduplicated Percentage of total 1 70.39516267212402 25.25820402404187 2 11.451844628917218 8.217980244922748 3 4.403518717070325 4.740026301132208 4 2.3550056373770216 3.37996024776245 5 1.578871130228583 2.832541869441201 6 1.2394419411797137 2.668314944203008 7 1.0174527370163104 2.5554767527496733 8 0.8475710212075278 2.4329082812961778 9 0.7339185038101149 2.370009009473675 >10 5.844962254128738 38.05574523531333 >50 0.08497381601733268 2.068991525663669 >100 0.040723701995074336 2.4861235418611023 >500 0.004446840701215192 1.1126882436908834 >1k 0.0021063982268914065 1.8210297784480605 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGGGTCATATCGTATGCCGTCTTCTGC 4381 0.3441503860988696 Illumina PCR Primer Index 7 (95% over 23bp) CTGTCTCTTATACACATCTGACGCGGGTCATATCGTATGCCGTCTTCTGCT 3084 0.24226427544599724 Illumina PCR Primer Index 7 (95% over 24bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCGGGTCATATCGTATGC 2548 0.20015868152931288 No Hit GCTGTCTCTTATACACATCTGACGCGGGTCATATCGTATGCCGTCTTCTGC 2498 0.1962309209027565 Illumina PCR Primer Index 7 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCGGGTCATATCGTATGCCGTCTTCTGC 2491 0.1956810344150386 Illumina PCR Primer Index 7 (95% over 23bp) GAATGATACCTGTCTCTTATACACATCTGACGCGGGTCATATCGTATGCCG 2167 0.1702291455549533 No Hit GAATCTGTCTCTTATACACATCTGACGCGGGTCATATCGTATGCCGTCTTC 1763 0.13849283969237777 No Hit CCTGTATCTTATACACATCTGACGCGGGTCATATCGTATGCCGTCTTCTGC 1542 0.12113213772299862 Illumina PCR Primer Index 7 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.26166741294118573 0.0 2 0.0 0.0 0.0 1.0722000958373592 0.0 3 0.0 0.0 0.0 1.4665472627436194 0.0 4 0.0 0.0 0.0 1.9220103849990966 0.0 5 0.0 0.0 0.0 2.767028806196435 0.0 6 0.0 0.0 0.0 3.3293270174942458 0.0 7 0.0 0.0 0.0 4.066174911036222 0.0 8 0.0 0.0 0.0 5.18079482164039 0.0 9 0.0 0.0 0.0 5.612534269711467 0.0 10 0.0 0.0 0.0 6.76446790626792 0.0 11 0.0 0.0 0.0 8.663225948357804 0.0 12 0.0 0.0 0.0 10.494740728521041 0.0 13 0.0 0.0 0.0 11.03260826872167 0.0 14 0.0 0.0 0.0 11.220041005820942 0.0 15 0.0 0.0 0.0 11.531198202656737 0.0 16 0.0 0.0 0.0 12.265610884610249 0.0 17 0.0 0.0 0.0 13.20693799637075 0.0 18 2.356656375933825E-4 0.0 0.0 14.253607648135493 0.0 19 2.356656375933825E-4 0.0 0.0 15.071917297072247 0.0 20 2.356656375933825E-4 0.0 0.0 15.838930392226176 0.0 21 2.356656375933825E-4 0.0 0.0 16.952921861130097 0.0 22 2.356656375933825E-4 0.0 0.0 18.15026041052954 0.0 23 2.356656375933825E-4 0.0 0.0 19.2355792268596 0.0 24 2.356656375933825E-4 0.0 0.0 20.077848215618346 0.0 25 2.356656375933825E-4 0.0 0.0 20.837084344731693 0.0 26 2.356656375933825E-4 0.0 0.0 21.505981979434246 0.0 27 2.356656375933825E-4 0.0 0.0 22.15830446429273 0.0 28 2.356656375933825E-4 0.0 0.0 22.842363255013787 0.0 29 2.356656375933825E-4 0.0 0.0 23.549438723006464 0.0 30 2.356656375933825E-4 0.0 0.0 24.3376617255438 0.0 31 2.356656375933825E-4 0.0 0.0 25.054163819040213 0.0 32 2.356656375933825E-4 0.0 0.0 25.736337284660525 0.0 33 2.356656375933825E-4 0.0 0.0 26.419060636768553 0.0 34 2.356656375933825E-4 0.0 0.0 27.108068405879074 0.0 35 2.356656375933825E-4 0.0 0.0 27.86384810564105 0.0 36 2.356656375933825E-4 0.0 0.0 28.551127660075885 0.0 37 2.356656375933825E-4 0.0 0.0 29.257810352005908 0.0 38 2.356656375933825E-4 0.0 0.0 29.964021712660745 0.0 39 2.356656375933825E-4 0.0 0.0 30.755544034124384 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTAGG 335 0.0 42.313435 2 TATGGGT 725 0.0 40.96552 4 TTAGGGA 2990 0.0 40.7107 4 TTATGGG 3805 0.0 40.505913 3 TAGGGAT 1570 0.0 40.414013 5 CGAACGA 45 1.9286745E-8 40.000004 22 CAAATCG 45 1.9286745E-8 40.000004 31 CGTTATT 210 0.0 39.642857 1 CTAGGGA 1540 0.0 39.44805 4 TAGGGAG 1510 0.0 39.33775 5 CGTTCAT 115 0.0 39.130436 17 ACGGGAG 460 0.0 39.130436 5 TTGCGAG 115 0.0 39.130436 1 TGGGCGA 1115 0.0 38.744396 6 TATGGGA 2405 0.0 38.638252 4 TTTGTCG 140 0.0 38.571426 1 ACGTAGG 35 6.248818E-6 38.571426 2 TAGGGAC 1110 0.0 38.51351 5 ACGGGTA 135 0.0 38.333332 5 TTTATGG 2345 0.0 38.187634 2 >>END_MODULE