##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934146.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1579131 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.908020930499116 33.0 31.0 34.0 30.0 34.0 2 32.13034320775161 33.0 31.0 34.0 30.0 34.0 3 32.22042693101459 34.0 31.0 34.0 30.0 34.0 4 35.65722159846143 37.0 35.0 37.0 33.0 37.0 5 29.41283275421735 37.0 35.0 37.0 0.0 37.0 6 23.656702325519543 35.0 10.0 37.0 0.0 37.0 7 30.36120055904165 35.0 19.0 37.0 17.0 37.0 8 34.24986084118417 35.0 32.0 37.0 32.0 37.0 9 36.85745577789303 38.0 37.0 39.0 34.0 39.0 10 36.9816728314497 39.0 37.0 39.0 34.0 39.0 11 37.113307255699496 39.0 37.0 39.0 34.0 39.0 12 36.892566227881034 39.0 35.0 39.0 33.0 39.0 13 36.693124256315656 39.0 35.0 39.0 33.0 39.0 14 37.253083499722315 40.0 36.0 41.0 31.0 41.0 15 37.283521759752674 40.0 36.0 41.0 31.0 41.0 16 37.69319201510198 40.0 36.0 41.0 33.0 41.0 17 37.809806152877755 40.0 36.0 41.0 33.0 41.0 18 37.91901558515411 40.0 36.0 41.0 33.0 41.0 19 37.928304238217095 40.0 36.0 41.0 33.0 41.0 20 37.826235442151415 40.0 36.0 41.0 33.0 41.0 21 37.72744693125523 40.0 36.0 41.0 33.0 41.0 22 37.90425366863167 40.0 36.0 41.0 34.0 41.0 23 37.89629676068673 40.0 36.0 41.0 34.0 41.0 24 37.84916894165209 40.0 35.0 41.0 34.0 41.0 25 37.57324946442062 39.0 35.0 41.0 33.0 41.0 26 37.46503298333071 39.0 35.0 41.0 33.0 41.0 27 36.64356725312846 39.0 35.0 41.0 32.0 41.0 28 37.01164374583236 39.0 35.0 41.0 32.0 41.0 29 37.27719739527626 39.0 35.0 41.0 32.0 41.0 30 37.3183225457546 39.0 35.0 41.0 33.0 41.0 31 37.28259276779444 39.0 35.0 41.0 32.0 41.0 32 37.331888234731636 39.0 35.0 41.0 33.0 41.0 33 36.15905900143813 39.0 35.0 41.0 31.0 41.0 34 36.578245883337104 39.0 35.0 41.0 31.0 41.0 35 36.84566574907338 39.0 35.0 41.0 31.0 41.0 36 36.99472241378328 39.0 35.0 41.0 32.0 41.0 37 37.124329140520956 39.0 35.0 41.0 32.0 41.0 38 37.08923198898635 39.0 35.0 41.0 32.0 41.0 39 37.10862240054815 39.0 35.0 41.0 32.0 41.0 40 37.0304749890921 39.0 35.0 41.0 32.0 41.0 41 36.887990293395546 39.0 35.0 40.0 32.0 41.0 42 36.94619319106521 39.0 35.0 40.0 32.0 41.0 43 36.85396968332583 39.0 35.0 40.0 32.0 41.0 44 36.89080639921577 39.0 35.0 40.0 32.0 41.0 45 36.845117979445654 39.0 35.0 40.0 32.0 41.0 46 36.82101548256605 39.0 35.0 40.0 32.0 41.0 47 36.772132267683936 39.0 35.0 40.0 32.0 41.0 48 36.71596340012323 38.0 35.0 40.0 32.0 41.0 49 36.757461540556164 39.0 35.0 40.0 32.0 41.0 50 36.66747217298628 38.0 35.0 40.0 32.0 41.0 51 35.855647821491694 37.0 34.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 8.0 10 13.0 11 10.0 12 17.0 13 19.0 14 28.0 15 36.0 16 61.0 17 116.0 18 259.0 19 420.0 20 771.0 21 1138.0 22 1927.0 23 3083.0 24 4616.0 25 6928.0 26 9222.0 27 11971.0 28 16160.0 29 21109.0 30 29738.0 31 42160.0 32 62491.0 33 102558.0 34 132839.0 35 138764.0 36 178099.0 37 264925.0 38 299673.0 39 249828.0 40 143.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.5905697500714 4.4945606159337 55.05888998442815 16.855979649566756 2 20.727792691043366 4.290650997289015 52.63692499229007 22.344631319377555 3 22.226591714050322 3.8464193280988086 51.17650150620816 22.750487451642705 4 20.83310377669744 4.680675637423367 49.14861401618992 25.33760656968928 5 15.16631615743089 22.72021763868862 40.809723829118674 21.303742374761818 6 17.002642592666472 29.48007480063402 39.17344412844786 14.343838478251648 7 80.97725901144364 2.2367365342077385 10.731091974003423 6.054912480345203 8 82.01282857470343 2.4605305069687065 9.157188352327958 6.369452565999907 9 76.3409115519865 5.1292767984416745 12.052768263051007 6.477043386520815 10 43.67294416992637 22.723320611146256 18.741067080565195 14.862668138362176 11 33.748181753128776 21.979050503093156 24.307989647470666 19.964778096307402 12 30.39779473647215 18.731378207381148 30.42483492503155 20.44599213111515 13 29.35316955971354 19.376226544852834 31.873669758873707 19.396934136559917 14 21.22274846102065 21.850245483116982 36.0233571502301 20.903648905632274 15 18.647597951024963 21.729229557269157 38.43810298195653 21.18506950974935 16 25.51289285056148 21.43286402458061 29.889223883262378 23.165019241595537 17 26.34714915988604 21.535198789714087 27.98159240746968 24.136059642930192 18 26.446634256435974 20.16799112929833 31.282711820615262 22.10266279365043 19 26.361714132646373 23.000245071498185 29.17674341140792 21.461297384447523 20 22.86992022827745 29.2255677331393 29.089796856625576 18.814715181957673 21 22.77949074522633 24.76210016775049 33.2292254410812 19.229183645941976 22 20.79707130060774 21.565658580573746 34.296964596350776 23.340305522467737 23 20.496399602059615 22.89822693620732 32.51693494713231 24.088438514600753 24 22.02686160932817 26.063512146870654 28.036496022179286 23.873130221621892 25 24.117695112058467 24.97994149947028 25.14965509511244 25.75270829335882 26 19.309797603872003 24.6941514035251 27.185964938944267 28.810086053658623 27 19.47070888988944 24.325784244625684 30.911494993132298 25.292011872352578 28 19.11342377548158 23.256968547891212 28.675518370546836 28.954089306080373 29 22.001404569981844 25.237994821202292 27.09762521285441 25.662975395961453 30 25.723261717995534 22.139328529425363 28.100518576356237 24.03689117622287 31 23.89611754819581 23.553967340264993 29.65517110360065 22.894744007938545 32 26.75921123706646 24.225095954673804 25.817427433189522 23.19826537507021 33 25.25015340715875 25.258955716783472 24.875326999469962 24.61556387658782 34 21.114651032751556 22.832431254911718 31.630877995555785 24.422039716780937 35 20.20826644527908 27.411722016729456 27.45763334390877 24.922378194082697 36 23.734129720713483 26.653963477380916 25.500670938636503 24.1112358632691 37 22.797475320286917 26.73103118107364 27.460039730712648 23.01145376792679 38 25.962570553044678 23.961596599648793 26.447394168058253 23.62843867924827 39 22.713125130214024 21.810540100852936 27.633996166245865 27.84233860268717 40 23.668840647166068 20.575367084808036 31.013766432297256 24.742025835728636 41 19.695769382020874 22.262054256423312 29.72476634300764 28.317410018548177 42 19.44297211567628 23.193515927430973 31.725043710749773 25.638468246142978 43 21.303362418950673 22.240333449219857 30.341624602392077 26.114679529437396 44 22.60781404455995 20.666176523670295 28.89443624373152 27.831573188038234 45 21.806993846615637 20.012842506416504 26.88959940625572 31.290564240712136 46 21.326539723430166 20.51134453063109 30.878502163531714 27.283613582407035 47 17.835949012463185 23.221252701644133 34.07817337510314 24.864624910789544 48 19.232666574210754 25.097664474954897 30.58536625523785 25.0843026955965 49 23.927590554551838 20.689923761866496 31.138898546099085 24.243587137482578 50 21.12237680091139 21.10401227003966 28.69432618319823 29.079284745850725 51 19.101708471304786 22.118367633844183 27.390887773085325 31.389036121765706 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 302.0 1 1020.0 2 1738.0 3 3203.0 4 4668.0 5 3215.5 6 1763.0 7 1825.0 8 1887.0 9 2085.0 10 2283.0 11 2404.5 12 2526.0 13 2452.5 14 2379.0 15 2302.0 16 2225.0 17 2287.0 18 2349.0 19 2555.0 20 2761.0 21 2876.0 22 2991.0 23 3987.0 24 4983.0 25 5944.5 26 8812.0 27 10718.0 28 12366.5 29 14015.0 30 16473.5 31 18932.0 32 22113.0 33 25294.0 34 29317.0 35 33340.0 36 34674.5 37 36009.0 38 39942.0 39 43875.0 40 50663.5 41 57452.0 42 66548.5 43 75645.0 44 88604.0 45 101563.0 46 126070.5 47 150578.0 48 177150.0 49 203722.0 50 196997.0 51 190272.0 52 165359.0 53 140446.0 54 125422.0 55 110398.0 56 100294.0 57 90190.0 58 80050.0 59 69910.0 60 58578.5 61 47247.0 62 41977.0 63 36707.0 64 31936.5 65 27166.0 66 23688.0 67 20210.0 68 16404.0 69 12598.0 70 11018.5 71 9439.0 72 7691.0 73 5943.0 74 4722.5 75 2841.5 76 2181.0 77 1657.0 78 1133.0 79 812.5 80 492.0 81 388.0 82 284.0 83 163.5 84 43.0 85 37.5 86 32.0 87 32.0 88 32.0 89 17.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1579131.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.93643905811596 #Duplication Level Percentage of deduplicated Percentage of total 1 68.77682130475603 24.71594047429296 2 12.76945640261437 9.177775836356398 3 5.0640174920681496 5.459482679788209 4 2.7630155071268234 3.9717175355396974 5 1.7059730561108883 3.065329838285839 6 1.2074109947978262 2.603403097959075 7 0.9330834282734549 2.3472187029400846 8 0.7597939574174287 2.1843431397964945 9 0.6457160511408799 2.088426196860437 >10 5.179205721274346 33.48865539874167 >50 0.12064261658351577 2.9613913609886975 >100 0.06831043815388592 4.538015492794992 >500 0.0037729564838334317 0.94668005835379 >1k 0.002382919884526378 1.6108404158917609 >5k 3.971533140877297E-4 0.8407797714099466 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCACGGCTTATCGTATGCCGTCTTCTGC 6411 0.4059827842021973 TruSeq Adapter, Index 20 (95% over 22bp) CTGTCTCTTATACACATCTGACGCACGGCTTATCGTATGCCGTCTTCTGCT 5371 0.34012377693807544 TruSeq Adapter, Index 22 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCACGGCTTATCGTATGCCGTCTTCTGC 4139 0.26210618371750033 TruSeq Adapter, Index 20 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCACGGCTTATCGTATGCCGTCTTCTGC 3547 0.22461721035176943 TruSeq Adapter, Index 20 (95% over 22bp) CCTGTATCTTATACACATCTGACGCACGGCTTATCGTATGCCGTCTTCTGC 2210 0.13995039043625893 TruSeq Adapter, Index 22 (95% over 21bp) CTGTCACTTATACACATCTGACGCACGGCTTATCGTATGCCGTCTTCTGCT 2057 0.13026151725221022 TruSeq Adapter, Index 22 (95% over 22bp) TCTGTATCTTATACACATCTGACGCACGGCTTATCGTATGCCGTCTTCTGC 1661 0.10518443371702539 TruSeq Adapter, Index 22 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3860984300859143 0.0 2 0.0 0.0 0.0 1.429077131662921 0.0 3 0.0 0.0 0.0 1.9814062291222196 0.0 4 0.0 0.0 0.0 2.5660948964968706 0.0 5 0.0 0.0 0.0 3.572977796015657 0.0 6 0.0 0.0 0.0 4.363285883185119 0.0 7 0.0 0.0 0.0 5.412597181614445 0.0 8 0.0 0.0 0.0 6.9621836313770045 0.0 9 0.0 0.0 0.0 7.677640423752051 0.0 10 0.0 0.0 0.0 9.002166381383178 0.0 11 6.332596852319408E-5 0.0 0.0 11.655967744284673 0.0 12 6.332596852319408E-5 0.0 0.0 13.961349628371554 0.0 13 6.332596852319408E-5 0.0 0.0 14.7355095935676 0.0 14 6.332596852319408E-5 0.0 0.0 15.056635579948718 0.0 15 6.332596852319408E-5 0.0 0.0 15.51403905059175 0.0 16 6.332596852319408E-5 0.0 0.0 16.427579472507347 0.0 17 6.332596852319408E-5 0.0 0.0 17.641095007317315 0.0 18 6.332596852319408E-5 0.0 0.0 18.936491019427773 0.0 19 6.332596852319408E-5 0.0 0.0 19.854844214951136 0.0 20 6.332596852319408E-5 0.0 0.0 20.85520453971203 0.0 21 6.332596852319408E-5 0.0 0.0 22.188406155030837 0.0 22 6.332596852319408E-5 0.0 0.0 23.59791556242009 0.0 23 6.332596852319408E-5 0.0 0.0 24.81833362779909 0.0 24 6.332596852319408E-5 0.0 0.0 25.788170835731805 0.0 25 6.332596852319408E-5 0.0 0.0 26.636738813942607 0.0 26 6.332596852319408E-5 0.0 0.0 27.394687331196714 0.0 27 6.332596852319408E-5 0.0 0.0 28.33311485874193 0.0 28 6.332596852319408E-5 0.0 0.0 29.15369275886548 0.0 29 6.332596852319408E-5 0.0 0.0 30.133662121761905 0.0 30 6.332596852319408E-5 0.0 0.0 31.159606137806172 0.0 31 6.332596852319408E-5 0.0 0.0 31.94858437963665 0.0 32 6.332596852319408E-5 0.0 0.0 32.713815383270926 0.0 33 6.332596852319408E-5 0.0 0.0 33.46473471801896 0.0 34 1.2665193704638816E-4 0.0 0.0 34.34958847619355 0.0 35 1.2665193704638816E-4 0.0 0.0 35.31328306517952 0.0 36 1.2665193704638816E-4 0.0 0.0 36.09535877644097 0.0 37 1.2665193704638816E-4 0.0 0.0 36.97128357305379 0.0 38 1.2665193704638816E-4 0.0 0.0 38.09449627674968 0.0 39 1.2665193704638816E-4 0.0 0.0 40.39145580702298 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACGG 30 2.1660198E-6 45.000004 2 GCGATAA 20 7.034089E-4 45.0 10 TAAGCGA 20 7.034089E-4 45.0 17 TCGTTAG 220 0.0 43.977272 1 TACGGGT 120 0.0 43.125004 4 CGTTAGG 380 0.0 42.63158 2 GCGATGT 355 0.0 41.830986 9 TTAGGGA 2490 0.0 40.933735 4 CATATCG 55 6.184564E-11 40.909092 32 TTTACGG 750 0.0 40.8 2 TATGGGA 2055 0.0 40.291973 4 TTACGGG 1290 0.0 40.290695 3 TTTTACG 470 0.0 40.212765 1 TTATGGG 4185 0.0 39.89247 3 ACACGCG 170 0.0 39.705883 36 AACGGGG 125 0.0 39.600002 4 TAGGGAA 1195 0.0 39.53975 5 TAGGGCG 650 0.0 39.46154 5 CGAATAT 120 0.0 39.375004 14 CTAGGGA 1360 0.0 39.375 4 >>END_MODULE