##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934143.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 720771 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.896449773922647 33.0 31.0 34.0 30.0 34.0 2 32.107494613407034 33.0 31.0 34.0 30.0 34.0 3 32.18420274955568 34.0 31.0 34.0 30.0 34.0 4 35.64310023571981 37.0 35.0 37.0 33.0 37.0 5 29.218771287968025 37.0 35.0 37.0 0.0 37.0 6 23.343107588956826 35.0 0.0 37.0 0.0 37.0 7 30.24451871676302 35.0 19.0 37.0 17.0 37.0 8 34.2255071305588 35.0 32.0 37.0 32.0 37.0 9 36.884137957825715 38.0 37.0 39.0 34.0 39.0 10 36.89165490842445 39.0 37.0 39.0 33.0 39.0 11 37.06840452792912 39.0 37.0 39.0 34.0 39.0 12 37.09364416714879 39.0 37.0 39.0 34.0 39.0 13 37.023637188510634 39.0 37.0 39.0 33.0 39.0 14 37.96660936691404 40.0 37.0 41.0 33.0 41.0 15 37.88521597012088 40.0 37.0 41.0 33.0 41.0 16 38.16339863840249 40.0 37.0 41.0 33.0 41.0 17 38.204118922653656 40.0 37.0 41.0 33.0 41.0 18 38.28389876951209 40.0 37.0 41.0 34.0 41.0 19 38.287325655443965 40.0 37.0 41.0 34.0 41.0 20 38.190669435923475 40.0 37.0 41.0 34.0 41.0 21 38.09708076490314 40.0 37.0 41.0 34.0 41.0 22 38.219025182755686 40.0 37.0 41.0 34.0 41.0 23 38.16260365636242 40.0 37.0 41.0 34.0 41.0 24 38.143837640526606 40.0 37.0 41.0 34.0 41.0 25 37.90477835539998 40.0 36.0 41.0 34.0 41.0 26 37.78183639463852 40.0 36.0 41.0 33.0 41.0 27 36.91197481585691 40.0 36.0 41.0 32.0 41.0 28 37.30609860829584 40.0 36.0 41.0 32.0 41.0 29 37.62595193202834 40.0 36.0 41.0 33.0 41.0 30 37.61313232635608 40.0 36.0 41.0 33.0 41.0 31 37.624357805738576 40.0 36.0 41.0 33.0 41.0 32 37.64199447536041 40.0 36.0 41.0 33.0 41.0 33 36.36579579367094 39.0 35.0 41.0 31.0 41.0 34 36.87768792029646 40.0 35.0 41.0 31.0 41.0 35 37.1861839613414 40.0 35.0 41.0 31.0 41.0 36 37.27598640899814 39.0 35.0 41.0 32.0 41.0 37 37.386075466410276 39.0 36.0 41.0 33.0 41.0 38 37.36753837210431 39.0 36.0 41.0 33.0 41.0 39 37.408937096525804 40.0 36.0 41.0 33.0 41.0 40 37.37105405184171 40.0 36.0 41.0 33.0 41.0 41 37.251880278202094 39.0 35.0 41.0 32.0 41.0 42 37.273945538874344 39.0 35.0 41.0 33.0 41.0 43 37.17024547325017 39.0 35.0 41.0 32.0 41.0 44 37.23111501433881 39.0 35.0 41.0 32.0 41.0 45 37.18365195048081 39.0 35.0 41.0 32.0 41.0 46 37.137462522770754 39.0 35.0 41.0 32.0 41.0 47 37.07782915794337 39.0 35.0 41.0 32.0 41.0 48 37.01910038000974 39.0 35.0 41.0 32.0 41.0 49 37.05676560238966 39.0 35.0 41.0 32.0 41.0 50 36.96618204672497 39.0 35.0 40.0 32.0 41.0 51 36.21161783701064 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 3.0 10 5.0 11 4.0 12 7.0 13 5.0 14 10.0 15 15.0 16 35.0 17 31.0 18 90.0 19 162.0 20 290.0 21 536.0 22 945.0 23 1440.0 24 2153.0 25 3295.0 26 4185.0 27 5111.0 28 6443.0 29 8374.0 30 11577.0 31 16320.0 32 23720.0 33 37257.0 34 50499.0 35 61461.0 36 85020.0 37 128639.0 38 147942.0 39 125118.0 40 77.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.470879100296766 4.304695943649231 55.46588306133293 15.75854189472107 2 20.006909267992192 4.951087099786202 53.024330890116275 22.01767274210533 3 20.368605285173793 5.01671127167991 52.91098004775442 21.70370339539188 4 18.603967140742345 4.46938070482858 52.25890053845119 24.66775161597789 5 14.951628187038601 22.93516248572709 41.670239229935724 20.442970097298588 6 15.207604079520404 30.299221250577506 40.9482345987838 13.544940071118289 7 81.39409049476185 1.873271815874945 11.488947252317312 5.243690437045886 8 82.7221128486024 2.629545306345566 8.620629853309858 6.027711991742176 9 77.35383360318325 4.637117753072751 11.322320126642166 6.686728517101825 10 38.37446290153183 23.491649913772893 21.10406772747516 17.029819457220118 11 28.318148205185835 24.166760316383428 25.94582745421223 21.56926402421851 12 23.946024465468227 21.25182616947685 32.036527551746666 22.765621813308247 13 24.045362535396126 22.483562740454317 34.4676741988787 19.003400525270855 14 20.34432572897633 24.363355351422296 34.84116314335621 20.45115577624516 15 18.583849794178732 24.063121296500555 36.42807493642225 20.924953972898468 16 21.1688594574421 23.613880136686966 31.865183255153163 23.352077150717772 17 21.953574713744032 24.8640691703745 29.180974262283026 24.00138185359844 18 22.551129276843824 23.12828901273775 31.886826745249188 22.433754965169243 19 22.72025372829928 25.769072285094712 29.474687522111736 22.03598646449427 20 22.021279990454666 27.93841594625755 30.103597397786537 19.936706665501248 21 22.110212536297936 26.956273212989977 31.088931158440058 19.844583092272025 22 20.62832716632606 24.09947126063618 30.966284714562605 24.30591685847516 23 19.47997352834673 26.056126009509263 30.24053409474022 24.223366367403795 24 21.076319663249492 26.174610243752873 29.16141187700393 23.587658215993706 25 21.741024541775406 26.54088469153171 26.510778041846855 25.20731272484603 26 20.373322456092158 26.12938089906503 28.397923889834637 25.099372755008183 27 20.12039885067518 27.509847094292084 29.96763188308076 22.40212217195198 28 18.62713677437078 24.45561766497265 31.41497091309168 25.5022746475649 29 20.509704191761323 24.199503032169716 30.19752459519043 25.093268180878532 30 22.57818363946385 25.28819833206386 29.2243999827962 22.909218045676088 31 21.436212056256426 25.369500160245074 29.051113321706897 24.14317446179161 32 23.213475569910553 25.971078192657586 27.375546463439843 23.439899773992018 33 21.5834155369736 27.984338992551034 25.86743917277471 24.564806297700656 34 20.14065493755992 23.898297795000076 29.755359191754383 26.205688075685618 35 21.50738584099527 25.53612728592022 27.77955827856559 25.176928594518927 36 22.906165758611266 27.57047661462517 26.19223026453617 23.33112736222739 37 19.223442674580415 27.85031584234105 30.181291977618415 22.744949505460124 38 20.452404439135314 25.626724715617026 30.139808621601034 23.781062223646625 39 19.906461275495268 23.59473397237125 29.34954375245397 27.14926099967951 40 22.563615905745376 21.939284460667814 28.558307701059004 26.938791932527806 41 21.911397656121014 24.07477548347533 25.915582064206244 28.09824479619741 42 22.095367321937204 25.132254211115594 28.69788046411412 24.074498002833078 43 20.89776086995731 24.697442044699354 30.499978495250225 23.904818590093107 44 20.589202395767867 22.805301545150957 29.72386513885825 26.881630920222925 45 21.14125013353756 21.713415217870864 28.286654152289703 28.858680496301876 46 22.313467106750963 22.38602829470109 29.230782037568105 26.06972256097984 47 19.032952213671194 23.879012890363235 32.32288757455558 24.765147321409987 48 18.841768051156333 24.88279911372683 30.91841930377332 25.35701353134352 49 21.560662124308553 21.742550685307815 32.18955812595124 24.507229064432394 50 20.76346023910507 20.948678567811413 29.7911541946055 28.496706998478018 51 19.655063813610703 21.34838943298218 27.22986912625508 31.766677627152035 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 86.0 1 298.5 2 511.0 3 1717.0 4 2923.0 5 1994.5 6 1066.0 7 1052.0 8 1038.0 9 1112.0 10 1186.0 11 1208.5 12 1231.0 13 1249.5 14 1268.0 15 1334.5 16 1401.0 17 1361.0 18 1321.0 19 1408.0 20 1495.0 21 1699.0 22 1903.0 23 2055.0 24 2207.0 25 2723.5 26 4196.0 27 5152.0 28 5942.5 29 6733.0 30 8105.0 31 9477.0 32 11553.5 33 13630.0 34 15920.5 35 18211.0 36 20214.5 37 22218.0 38 24708.5 39 27199.0 40 30179.5 41 33160.0 42 39039.0 43 44918.0 44 51655.0 45 58392.0 46 70987.0 47 83582.0 48 90131.5 49 96681.0 50 89967.5 51 83254.0 52 69579.5 53 55905.0 54 47737.5 55 39570.0 56 34789.0 57 30008.0 58 26072.0 59 22136.0 60 18906.0 61 15676.0 62 13430.5 63 11185.0 64 9600.0 65 8015.0 66 6761.0 67 5507.0 68 4473.5 69 3440.0 70 2869.0 71 2298.0 72 1909.0 73 1520.0 74 1279.5 75 761.0 76 483.0 77 371.5 78 260.0 79 208.5 80 157.0 81 104.5 82 52.0 83 39.5 84 27.0 85 17.5 86 8.0 87 5.0 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 720771.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.349483424301155 #Duplication Level Percentage of deduplicated Percentage of total 1 75.5924985647422 38.816357520517386 2 10.719986066914524 11.009314937035333 3 4.286635834572706 6.603496072002195 4 2.4857961039487453 5.105773833436339 5 1.6565878782416457 4.25324658973338 6 1.1885337367243765 3.6618356047890654 7 0.8937351527275255 3.2124986887488127 8 0.6801696490061752 2.7941088093884265 9 0.5136170818551362 2.3736574648042423 >10 1.894949521009696 14.682072289198143 >50 0.05355988444515008 1.8652885683545382 >100 0.028883009575621107 2.780216321820386 >500 0.0030845932556111725 1.1833342517383405 >1k 0.0019629229808434735 1.6587990484334003 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGATTCCGATCGTATGCCGTCTTCTGC 2607 0.3616960171816014 No Hit CTGTCTCTTATACACATCTGACGCGATTCCGATCGTATGCCGTCTTCTGCT 2205 0.30592240808800575 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCGATTCCGATCGTATGCCGTCTTCTGC 1669 0.23155759596321163 No Hit GCTGTCTCTTATACACATCTGACGCGATTCCGATCGTATGCCGTCTTCTGC 1530 0.21227269132637136 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGATTCCGATCGTATGC 1310 0.18174982067813494 No Hit GAATCTGTCTCTTATACACATCTGACGCGATTCCGATCGTATGCCGTCTTC 1117 0.1549729387003639 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGATTCCGATCGTATGCCG 1082 0.15011702746087174 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 984 0.13652047599029374 No Hit CCTGTATCTTATACACATCTGACGCGATTCCGATCGTATGCCGTCTTCTGC 915 0.12694739383243778 No Hit CTGTCACTTATACACATCTGACGCGATTCCGATCGTATGCCGTCTTCTGCT 914 0.1268086535113094 Illumina Single End Adapter 1 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCGATTCCGATCGTATGCCGTCTTCTG 805 0.11168595850831957 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGATTCCGATCGTATGCC 778 0.10793996983785419 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.387403211283473E-4 0.0 0.0 0.32492983208258935 0.0 2 1.387403211283473E-4 0.0 0.0 1.2034335454672844 0.0 3 1.387403211283473E-4 0.0 0.0 1.7123330433660622 0.0 4 1.387403211283473E-4 0.0 0.0 2.2972622372431744 0.0 5 1.387403211283473E-4 0.0 0.0 3.4270246721913065 0.0 6 1.387403211283473E-4 0.0 0.0 4.388078876647368 0.0 7 1.387403211283473E-4 0.0 0.0 5.547947961280351 0.0 8 1.387403211283473E-4 0.0 0.0 7.439117278580853 0.0 9 1.387403211283473E-4 0.0 0.0 8.281271027829922 0.0 10 1.387403211283473E-4 0.0 0.0 9.886635283606028 0.0 11 1.387403211283473E-4 0.0 0.0 12.53407809137715 0.0 12 1.387403211283473E-4 0.0 0.0 14.928874774373552 0.0 13 1.387403211283473E-4 0.0 0.0 15.715948616134668 0.0 14 1.387403211283473E-4 0.0 0.0 16.012297942064816 0.0 15 1.387403211283473E-4 0.0 0.0 16.398550996086136 0.0 16 1.387403211283473E-4 0.0 0.0 17.24764176139162 0.0 17 1.387403211283473E-4 0.0 0.0 18.461342090622402 0.0 18 1.387403211283473E-4 0.0 0.0 19.74663242555541 0.0 19 1.387403211283473E-4 0.0 0.0 20.69880724945926 0.0 20 1.387403211283473E-4 0.0 0.0 21.626147555881133 0.0 21 1.387403211283473E-4 0.0 0.0 22.973316074037385 0.0 22 1.387403211283473E-4 0.0 0.0 24.393739481749403 0.0 23 1.387403211283473E-4 0.0 0.0 25.77476063826097 0.0 24 1.387403211283473E-4 0.0 0.0 26.816422969292606 0.0 25 1.387403211283473E-4 0.0 0.0 27.711436780891574 0.0 26 1.387403211283473E-4 0.0 0.0 28.513772057976805 0.0 27 1.387403211283473E-4 0.0 0.0 29.40226507448274 0.0 28 1.387403211283473E-4 0.0 0.0 30.268559639608142 0.0 29 1.387403211283473E-4 0.0 0.0 31.175782599466405 0.0 30 1.387403211283473E-4 0.0 0.0 32.11214102676162 0.0 31 1.387403211283473E-4 0.0 0.0 32.93972704229221 0.0 32 1.387403211283473E-4 0.0 0.0 33.76939416263973 0.0 33 1.387403211283473E-4 0.0 0.0 34.57297810261512 0.0 34 1.387403211283473E-4 0.0 0.0 35.41943280181916 0.0 35 1.387403211283473E-4 0.0 0.0 36.320273706905525 0.0 36 1.387403211283473E-4 0.0 0.0 37.14661105954596 0.0 37 1.387403211283473E-4 0.0 0.0 38.013183105313615 0.0 38 1.387403211283473E-4 0.0 0.0 38.93760986499179 0.0 39 1.387403211283473E-4 0.0 0.0 40.29504516691154 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAATAT 30 2.16437E-6 45.000004 14 TAATACG 35 1.2110831E-7 45.0 4 ATCTCGC 20 7.031535E-4 45.0 12 ATAGGCG 20 7.031535E-4 45.0 37 AACGGGG 35 1.2110831E-7 45.0 4 ACGATCG 45 3.8380676E-10 45.0 33 TTAACGG 20 7.031535E-4 45.0 2 TTTATCG 20 7.031535E-4 45.0 2 CGTTATT 215 0.0 43.953487 1 CGTTTAT 355 0.0 42.464787 1 TAACGGG 80 0.0 42.1875 3 TAGGGCG 305 0.0 42.049183 5 AGGGCGA 455 0.0 42.032967 6 TCGTTTG 120 0.0 41.250004 1 CTTTACG 115 0.0 41.086956 1 TATGGGT 490 0.0 40.867348 4 TGTCGAG 50 1.0804797E-9 40.5 1 TTAGGGT 725 0.0 40.34483 4 CGTTCTG 95 0.0 40.263157 1 CGTTAGG 180 0.0 40.0 2 >>END_MODULE