##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934141.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1867971 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.90324314456702 33.0 31.0 34.0 30.0 34.0 2 32.12792703955254 33.0 31.0 34.0 30.0 34.0 3 32.19517273019763 33.0 31.0 34.0 30.0 34.0 4 35.659103380084595 37.0 35.0 37.0 33.0 37.0 5 29.184725030527776 37.0 35.0 37.0 0.0 37.0 6 23.432917855791125 35.0 10.0 37.0 0.0 37.0 7 30.302238632184334 35.0 19.0 37.0 17.0 37.0 8 34.29816897585669 35.0 32.0 37.0 32.0 37.0 9 36.922436697357725 38.0 37.0 39.0 34.0 39.0 10 36.8704813939831 39.0 37.0 39.0 33.0 39.0 11 37.05391304254724 39.0 37.0 39.0 34.0 39.0 12 37.1634693472222 39.0 37.0 39.0 34.0 39.0 13 37.166695307368265 39.0 37.0 39.0 34.0 39.0 14 38.237337731688555 40.0 38.0 41.0 33.0 41.0 15 38.11838620620984 40.0 38.0 41.0 33.0 41.0 16 38.32757949668383 40.0 38.0 41.0 34.0 41.0 17 38.34150476640162 40.0 38.0 41.0 34.0 41.0 18 38.38419225994408 40.0 38.0 41.0 34.0 41.0 19 38.35885246612501 40.0 37.0 41.0 34.0 41.0 20 38.281930501062384 40.0 37.0 41.0 34.0 41.0 21 38.12521607669498 40.0 37.0 41.0 34.0 41.0 22 38.199251487308956 40.0 37.0 41.0 34.0 41.0 23 38.12493716444206 40.0 37.0 41.0 34.0 41.0 24 38.10138968966863 40.0 37.0 41.0 34.0 41.0 25 37.8781640614335 40.0 36.0 41.0 33.0 41.0 26 37.79060167422299 40.0 36.0 41.0 33.0 41.0 27 36.93953814058141 40.0 36.0 41.0 32.0 41.0 28 37.31837325097659 40.0 36.0 41.0 32.0 41.0 29 37.61052607347759 40.0 36.0 41.0 33.0 41.0 30 37.59290213820236 40.0 36.0 41.0 33.0 41.0 31 37.59057876166172 40.0 36.0 41.0 33.0 41.0 32 37.5596339557734 40.0 36.0 41.0 33.0 41.0 33 36.241179868424084 40.0 35.0 41.0 30.0 41.0 34 36.6730934259686 40.0 36.0 41.0 30.0 41.0 35 36.944933834625914 40.0 35.0 41.0 30.0 41.0 36 37.05875465946741 40.0 36.0 41.0 32.0 41.0 37 37.16192167865561 40.0 36.0 41.0 32.0 41.0 38 37.10701504466611 40.0 36.0 41.0 32.0 41.0 39 37.09093074785422 40.0 36.0 41.0 32.0 41.0 40 37.043018333796404 40.0 36.0 41.0 32.0 41.0 41 36.96334097263823 39.0 35.0 41.0 32.0 41.0 42 37.01474755229069 40.0 35.0 41.0 32.0 41.0 43 36.915558646253075 39.0 35.0 41.0 32.0 41.0 44 36.944185429002914 39.0 35.0 41.0 32.0 41.0 45 36.86608250342216 39.0 35.0 41.0 32.0 41.0 46 36.82715577490229 39.0 35.0 41.0 32.0 41.0 47 36.790856496166164 39.0 35.0 41.0 31.0 41.0 48 36.72541597273191 39.0 35.0 41.0 31.0 41.0 49 36.74464325195627 39.0 35.0 41.0 31.0 41.0 50 36.666653818501466 39.0 35.0 41.0 31.0 41.0 51 35.93918749273945 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 7.0 10 18.0 11 14.0 12 26.0 13 21.0 14 29.0 15 59.0 16 93.0 17 168.0 18 303.0 19 599.0 20 1073.0 21 2011.0 22 3427.0 23 5460.0 24 8922.0 25 13454.0 26 16461.0 27 17335.0 28 18451.0 29 21703.0 30 28772.0 31 39320.0 32 55928.0 33 87585.0 34 121652.0 35 155893.0 36 217510.0 37 334849.0 38 383900.0 39 332760.0 40 162.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.30400204285827 4.342144497960621 55.61890414786953 16.734949311311578 2 22.315228662543475 4.050062875708456 51.70176624797709 21.932942213770986 3 19.86171091521228 4.070031065792777 53.92995929808332 22.13829872091162 4 17.95145641982665 4.339039524703542 52.7360435467146 24.97346050875522 5 14.130090884708595 23.058120281310575 43.404099956583906 19.407688877396918 6 15.435785673332186 29.737506631526934 41.56563458426282 13.26107311087806 7 81.68472636887832 1.8858965155240632 11.499857331832239 4.92951978376538 8 83.80269286835824 1.915447295487992 9.353999607060281 4.9278602290934925 9 78.49425927918581 4.442788458707335 11.768223382482919 5.294728879623934 10 37.544747750366575 21.602209027870348 22.81170317954615 18.04134004221693 11 26.10072640314009 25.389312789117174 26.49409439439906 22.015866413343677 12 21.65263807628705 21.521372655142933 34.236719949078434 22.589269319491574 13 22.176575546408376 22.108480270839323 35.85505342427693 19.859890758475373 14 20.185163474165286 23.90866881766366 35.61811184434876 20.288055863822297 15 18.516240348485066 24.192666802643082 36.13749892262781 21.15359392624404 16 20.374620376868805 23.819802341685175 33.182956266451676 22.622621014994344 17 21.20862690052469 24.534267394943498 30.514071149926846 23.743034554604968 18 22.178395703145284 23.231838181642004 32.660357146872194 21.929408968340514 19 23.003783249311685 26.274444303471522 29.434611136896667 21.287161310320126 20 22.686380034807822 26.454532752382132 30.05351796146728 20.805569251342767 21 22.598048899046077 26.420645716662627 31.032066343642377 19.949239040648916 22 21.71811018479409 23.888700627579336 30.661075573443057 23.73211361418352 23 20.423015132461906 25.404623519315876 29.948430676921646 24.22393067130057 24 20.860120419428352 25.557195481086165 30.364604161413638 23.218079938071845 25 21.14599209516636 26.00222380326033 27.71354587410618 25.13823822746713 26 19.608387924651936 26.080972349142467 29.217048872814406 25.093590853391195 27 19.510152994880542 25.99617445881119 29.755922334982714 24.73775021132555 28 18.979256101941626 23.851440948494382 31.196683460289265 25.972619489274727 29 20.370819461329965 23.27760977017309 30.420547214062744 25.931023554434198 30 21.530580506870827 23.24318739423685 30.844322529632418 24.381909569259907 31 20.457758712528193 24.67222456879684 30.17059686686785 24.69941985180712 32 20.937851818898686 24.25289257702609 29.43011427907607 25.379141324999154 33 20.823342546538466 25.55023605826857 28.638239030477454 24.98818236471551 34 19.103615634289824 23.01598900625331 32.006920878321985 25.873474481134878 35 19.592970126409888 23.227020119691367 29.598746447348486 27.581263306550262 36 20.288537670017362 23.671298965562098 29.84939273682514 26.190770627595395 37 19.038250593826138 24.793425593866285 32.08267151899039 24.085652293317185 38 21.020294212276312 24.49513402509996 30.918948955845675 23.565622806778048 39 20.905999076002786 22.564215397348246 32.66303384795589 23.866751678693085 40 20.958462417243094 22.087816138473244 32.5445630579918 24.409158386291864 41 18.61897213607706 22.647728471159347 30.584521922449547 28.148777470314045 42 19.288093872977687 22.861222149594397 30.99020273869348 26.860481238734437 43 20.26359081591738 22.379683624638712 31.68989240196984 25.666833157474073 44 20.764669258783996 22.40457694471702 30.138101715711862 26.69265208078712 45 21.09775794163828 21.221046793553004 29.341515473205952 28.339679791602762 46 20.915474597839044 21.546212441199568 30.600367992864985 26.9379449680964 47 18.368379380622077 22.521066975879176 32.62063490279024 26.4899187407085 48 18.60906834206741 22.682472051225634 32.18529623853904 26.523163368167925 49 20.822378934148336 20.878375520819116 33.19473375121991 25.104511793812645 50 20.276974321335825 20.445338819499874 32.17710553322294 27.100581325941352 51 18.63385459410237 20.49566079987323 30.71787517043894 30.152609435585454 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 197.0 1 682.0 2 1167.0 3 7840.0 4 14513.0 5 10284.0 6 6055.0 7 5921.0 8 5787.0 9 6017.5 10 6248.0 11 6352.5 12 6457.0 13 6363.5 14 6270.0 15 6099.5 16 5929.0 17 5759.5 18 5590.0 19 5735.0 20 5880.0 21 6163.0 22 6446.0 23 7264.5 24 8083.0 25 9126.5 26 11348.0 27 12526.0 28 16006.5 29 19487.0 30 22568.5 31 25650.0 32 30059.5 33 34469.0 34 40925.5 35 47382.0 36 52921.5 37 58461.0 38 63997.5 39 69534.0 40 76579.5 41 83625.0 42 94492.0 43 105359.0 44 122687.5 45 140016.0 46 165445.5 47 190875.0 48 211063.5 49 231252.0 50 217854.5 51 204457.0 52 176637.0 53 148817.0 54 128343.0 55 107869.0 56 95412.0 57 82955.0 58 73275.0 59 63595.0 60 55962.5 61 48330.0 62 42046.5 63 35763.0 64 29810.0 65 23857.0 66 19423.5 67 14990.0 68 12604.0 69 10218.0 70 8926.0 71 7634.0 72 6562.5 73 5491.0 74 4619.5 75 2668.5 76 1589.0 77 1121.5 78 654.0 79 494.0 80 334.0 81 232.0 82 130.0 83 109.0 84 88.0 85 50.5 86 13.0 87 8.0 88 3.0 89 3.0 90 3.0 91 3.5 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1867971.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.02187819407641 #Duplication Level Percentage of deduplicated Percentage of total 1 75.16901829728505 33.84250385748668 2 10.993207721640191 9.8986971801173 3 3.998315755494418 5.400350547759788 4 2.115137371322014 3.809098283815947 5 1.3202458496466782 2.9719973914513833 6 0.9421591790958891 2.5450665480411683 7 0.7284412252566778 2.2957054480534946 8 0.5856226381352672 2.1092664865455744 9 0.49893465804337966 2.0216677861108985 >10 3.5369379497047264 27.81544605227722 >50 0.07470143955790544 2.2840212050548567 >100 0.034267064099630304 2.6784561856378435 >500 0.0012903645935184935 0.3991101600051757 >1k 0.0017204861246913243 1.9286128676426717 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4687 0.25091395958502566 No Hit CTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTGCT 4473 0.2394576789468359 No Hit CCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTGC 4244 0.22719838798353936 No Hit TCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTGC 3044 0.16295756197499853 No Hit GCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTGC 2509 0.1343168603795241 No Hit CGCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTG 2409 0.1289634582121457 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.353402167378402E-5 0.0 0.0 0.2561602937090565 0.0 2 5.353402167378402E-5 0.0 0.0 0.8314368906155395 0.0 3 5.353402167378402E-5 0.0 0.0 1.243059983265265 0.0 4 5.353402167378402E-5 0.0 0.0 1.6850904002256994 0.0 5 5.353402167378402E-5 0.0 0.0 2.4621367248206742 0.0 6 5.353402167378402E-5 0.0 0.0 3.4376872017820403 0.0 7 5.353402167378402E-5 0.0 0.0 4.494127585492494 0.0 8 5.353402167378402E-5 0.0 0.0 6.132857522948696 0.0 9 5.353402167378402E-5 0.0 0.0 6.966542842474535 0.0 10 5.353402167378402E-5 0.0 0.0 8.258158183397923 0.0 11 5.353402167378402E-5 0.0 0.0 10.499467068814237 0.0 12 5.353402167378402E-5 0.0 0.0 12.357793563176301 0.0 13 1.0706804334756803E-4 0.0 0.0 13.1106960439964 0.0 14 1.0706804334756803E-4 0.0 0.0 13.39421222278076 0.0 15 1.0706804334756803E-4 0.0 0.0 13.714024468259947 0.0 16 1.0706804334756803E-4 0.0 0.0 14.445031534215467 0.0 17 1.6060206502135205E-4 0.0 0.0 15.458644700586893 0.0 18 1.6060206502135205E-4 0.0 0.0 16.632645795892977 0.0 19 1.6060206502135205E-4 0.0 0.0 17.400216598651692 0.0 20 1.6060206502135205E-4 0.0 0.0 18.201567369086565 0.0 21 2.1413608669513607E-4 0.0 0.0 19.421179450858713 0.0 22 2.1413608669513607E-4 0.0 0.0 20.658778963913253 0.0 23 2.1413608669513607E-4 0.0 0.0 21.93369169007442 0.0 24 2.1413608669513607E-4 0.0 0.0 22.86689675589182 0.0 25 2.1413608669513607E-4 0.0 0.0 23.64951061874087 0.0 26 2.1413608669513607E-4 0.0 0.0 24.35985355233031 0.0 27 2.1413608669513607E-4 0.0 0.0 25.097445302951705 0.0 28 2.1413608669513607E-4 0.0 0.0 25.87122605222458 0.0 29 2.1413608669513607E-4 0.0 0.0 26.708230481094194 0.0 30 2.1413608669513607E-4 0.0 0.0 27.582119850897044 0.0 31 2.1413608669513607E-4 0.0 0.0 28.379616171771403 0.0 32 2.1413608669513607E-4 0.0 0.0 29.14552741985823 0.0 33 2.1413608669513607E-4 0.0 0.0 29.913740630877033 0.0 34 2.1413608669513607E-4 0.0 0.0 30.688217322431665 0.0 35 2.1413608669513607E-4 0.0 0.0 31.52805905444999 0.0 36 2.1413608669513607E-4 0.0 0.0 32.306497263608485 0.0 37 2.1413608669513607E-4 0.0 0.0 33.114593320774254 0.0 38 2.1413608669513607E-4 0.0 0.0 33.973225494400076 0.0 39 2.1413608669513607E-4 0.0 0.0 35.06687202317381 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTAT 1900 0.0 44.28947 1 CGTTTTT 3800 0.0 42.453945 1 CGTTATT 1370 0.0 41.715332 1 GTTTACG 125 0.0 41.4 1 GCGTTAG 120 0.0 41.249996 1 CCGTTAG 55 6.184564E-11 40.909092 1 ATGGGCG 730 0.0 40.68493 5 GCGTACG 50 1.0822987E-9 40.500004 1 TCTACGG 490 0.0 39.94898 2 TAGGGCG 1170 0.0 39.807693 5 AGGGCGA 1360 0.0 39.54044 6 CGTAGAC 40 3.4597724E-7 39.375 15 CCGTAGG 120 0.0 39.374996 2 TTATGGG 5460 0.0 39.27198 3 TAGGGCA 1430 0.0 39.020977 5 ACGGGAG 515 0.0 38.883495 5 CTAGGGT 1020 0.0 38.82353 4 TAGGGTA 1380 0.0 38.804348 5 TTAGGGA 3275 0.0 38.748093 4 CGCATGG 215 0.0 38.720932 2 >>END_MODULE