##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934138.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1752634 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.04890638889808 33.0 31.0 34.0 30.0 34.0 2 32.27481265341195 34.0 31.0 34.0 30.0 34.0 3 32.34792090076993 34.0 31.0 34.0 30.0 34.0 4 35.75293871966423 37.0 35.0 37.0 35.0 37.0 5 29.219464531670617 37.0 35.0 37.0 0.0 37.0 6 23.33078611963479 35.0 0.0 37.0 0.0 37.0 7 30.263346483064918 35.0 19.0 37.0 17.0 37.0 8 34.307925670733304 35.0 32.0 37.0 32.0 37.0 9 36.976383546136844 38.0 37.0 39.0 34.0 39.0 10 37.08628156249394 39.0 37.0 39.0 34.0 39.0 11 37.23475922525753 39.0 37.0 39.0 34.0 39.0 12 37.107824565767864 39.0 37.0 39.0 34.0 39.0 13 36.98920481971707 39.0 37.0 39.0 33.0 39.0 14 37.77952327753541 40.0 37.0 41.0 33.0 41.0 15 37.778258894897625 40.0 37.0 41.0 33.0 41.0 16 38.11521800900815 40.0 37.0 41.0 33.0 41.0 17 38.16346995436583 40.0 37.0 41.0 33.0 41.0 18 38.276052501549096 40.0 37.0 41.0 34.0 41.0 19 38.270301158142544 40.0 37.0 41.0 34.0 41.0 20 38.178809722965546 40.0 37.0 41.0 33.0 41.0 21 38.08550216417118 40.0 37.0 41.0 33.0 41.0 22 38.238154686032566 40.0 37.0 41.0 34.0 41.0 23 38.21419589029997 40.0 37.0 41.0 34.0 41.0 24 38.1815758452706 40.0 37.0 41.0 34.0 41.0 25 37.953183037645054 40.0 36.0 41.0 34.0 41.0 26 37.81571166598388 40.0 36.0 41.0 34.0 41.0 27 36.93038249857072 40.0 35.0 41.0 33.0 41.0 28 37.29806051919568 40.0 35.0 41.0 33.0 41.0 29 37.602113732815866 40.0 35.0 41.0 33.0 41.0 30 37.647775861931244 40.0 36.0 41.0 33.0 41.0 31 37.643236408742496 40.0 36.0 41.0 33.0 41.0 32 37.653617355363416 40.0 36.0 41.0 33.0 41.0 33 36.41478882641784 40.0 35.0 41.0 31.0 41.0 34 36.87600719830837 40.0 35.0 41.0 31.0 41.0 35 37.179709511512385 40.0 35.0 41.0 31.0 41.0 36 37.32248604101027 39.0 35.0 41.0 32.0 41.0 37 37.42989123798808 40.0 35.0 41.0 33.0 41.0 38 37.348239849278286 39.0 35.0 41.0 33.0 41.0 39 37.383343584570426 39.0 35.0 41.0 33.0 41.0 40 37.28149687841272 39.0 35.0 41.0 33.0 41.0 41 37.12845237511083 39.0 35.0 41.0 32.0 41.0 42 37.203976414927475 39.0 35.0 41.0 33.0 41.0 43 37.13895599423496 39.0 35.0 41.0 33.0 41.0 44 37.17588897624946 39.0 35.0 41.0 33.0 41.0 45 37.073123652742105 39.0 35.0 41.0 33.0 41.0 46 37.00508092391224 39.0 35.0 41.0 33.0 41.0 47 36.93657660412841 39.0 35.0 41.0 32.0 41.0 48 36.88421028006989 39.0 35.0 40.0 32.0 41.0 49 36.90313322690305 39.0 35.0 40.0 32.0 41.0 50 36.811889989581395 39.0 35.0 40.0 32.0 41.0 51 36.012652384924635 38.0 34.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 3.0 10 11.0 11 22.0 12 17.0 13 38.0 14 38.0 15 68.0 16 77.0 17 159.0 18 268.0 19 477.0 20 841.0 21 1464.0 22 2337.0 23 3609.0 24 5277.0 25 7425.0 26 9920.0 27 12137.0 28 15782.0 29 20649.0 30 28352.0 31 40618.0 32 59851.0 33 98505.0 34 129474.0 35 145382.0 36 193506.0 37 297138.0 38 357495.0 39 321464.0 40 226.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.032645720669574 4.103594931970965 54.2744805817986 15.589278765560866 2 20.11235660154944 4.744858310405937 53.10053325451862 22.042251833526 3 22.01977138409959 5.1064283815103435 51.04591146811028 21.82788876627978 4 19.385507755755054 4.699041556879531 50.56783104744059 25.347619639924822 5 15.428435143903405 23.315021847116967 40.57544244833776 20.68110056064187 6 16.66274875416088 30.433678680203624 39.20727316713016 13.696299398505335 7 85.23981618523891 2.035222413806876 8.666726766683745 4.058234634270475 8 87.02706897161644 2.6168612499814565 6.307477773454127 4.048592004947981 9 81.66222953565891 5.02808915038736 8.207303977898409 5.102377336055332 10 40.795853555277375 30.763810356298006 14.86374223026599 13.576593858158633 11 32.52544455944595 22.779028593534075 25.576132837774455 19.119394009245514 12 28.516278926461542 21.428832260471953 29.91862533763467 20.136263475431836 13 27.542259250933164 21.76392789367318 31.45762321169166 19.23618964370199 14 21.45251090644139 23.341724512933105 35.340179409962374 19.865585170663127 15 20.17671687300372 22.306996212557785 35.96934670901055 21.546940205427944 16 26.26794869892973 23.406255955322102 29.309427980970355 21.016367364777814 17 25.886865141267375 22.919445816981753 28.66268713262438 22.53100190912649 18 27.610727624820697 20.60658414706094 29.980760386937604 21.80192784118076 19 26.26880455360332 23.812102241540448 28.075057313734643 21.844035891121592 20 25.15739167447396 28.69931771265421 27.583511446200404 18.559779166671422 21 24.645134123838748 25.560156883867368 30.65232102081781 19.142387971476076 22 23.182820828535792 21.12500385134603 33.06697233991809 22.625202980200086 23 22.042993574243113 23.956741681377856 31.882355357707315 22.11790938667172 24 21.736768772031127 26.94841022141531 28.87191507182903 22.442905934724536 25 24.87290558097127 26.325233905082296 25.720030536894754 23.081829977051683 26 22.216503845069763 25.220325521472255 26.507131551710167 26.056039081747816 27 21.876273083826973 25.502072880019444 30.105201656478194 22.516452379675393 28 18.87861356107436 26.535260641982294 28.787698971947368 25.79842682499598 29 21.42489532897342 26.944701517829735 28.132856032691368 23.49754712050548 30 25.32787792545392 23.714363637815996 29.25476739581681 21.70299104091328 31 24.589104171207453 25.598727401157344 28.319090009665455 21.493078417969752 32 25.683171728951965 25.64756817453045 26.649773997309197 22.01948609920839 33 24.538836973378356 26.271143889711148 25.141701005458074 24.048318131452433 34 21.36327379247464 25.217016216734358 30.359789893383333 23.059920097407673 35 20.937343449915954 28.774176468104578 27.38951772018573 22.898962361793735 36 24.98433785947323 27.85727082779405 24.518581746103294 22.639809566629427 37 23.33961340473824 27.969216619100166 25.875739030510648 22.815430945650945 38 22.57659043473994 27.13692647751898 27.115758338592084 23.170724749148995 39 21.96128798140399 22.811950469978328 27.259998379581816 27.966763169035865 40 25.075172568830684 22.879848274083464 27.933270722809212 24.11170843427664 41 21.858585420572695 25.37580578717519 25.740000479278617 27.025608312973503 42 21.07102794993136 25.138334643741935 29.170494238956906 24.620143167369797 43 21.114048911524026 23.627579973913548 29.52966791697525 25.728703197587176 44 22.920529899568308 23.387655380415993 28.625086583964475 25.066728136051225 45 22.31629650001084 22.45038039887392 26.41641095630919 28.816912144806047 46 22.57465049747979 23.560823309373205 28.070207470584275 25.794318722562725 47 19.11129191833549 26.550209570281076 31.197386333940802 23.14111217744264 48 20.304524504260442 28.165207339353227 27.9728682657075 23.55739989067883 49 23.279475349673692 24.19307168524632 29.363004483537352 23.16444848154264 50 21.50517449735655 24.76335618275122 26.809248251488903 26.922221068403328 51 20.363635533716682 24.589047114229214 25.76607551833412 29.28124183371999 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 223.0 1 933.0 2 1643.0 3 3536.5 4 5430.0 5 3860.5 6 2291.0 7 2195.0 8 2099.0 9 2277.0 10 2455.0 11 2460.5 12 2466.0 13 2433.0 14 2400.0 15 2392.5 16 2385.0 17 2414.5 18 2444.0 19 2863.5 20 3283.0 21 3720.5 22 4158.0 23 5575.0 24 6992.0 25 8471.5 26 11571.0 27 13191.0 28 16317.0 29 19443.0 30 23228.5 31 27014.0 32 31969.5 33 36925.0 34 41539.0 35 46153.0 36 50474.0 37 54795.0 38 59361.5 39 63928.0 40 70477.5 41 77027.0 42 86083.0 43 95139.0 44 106404.0 45 117669.0 46 136433.5 47 155198.0 48 170788.5 49 186379.0 50 182518.5 51 178658.0 52 161362.5 53 144067.0 54 132326.0 55 120585.0 56 110640.5 57 100696.0 58 89399.5 59 78103.0 60 66935.5 61 55768.0 62 49609.0 63 43450.0 64 37505.0 65 31560.0 66 26369.0 67 21178.0 68 17176.5 69 13175.0 70 11380.0 71 9585.0 72 7945.5 73 6306.0 74 5147.5 75 3332.0 76 2675.0 77 1934.0 78 1193.0 79 747.5 80 302.0 81 247.5 82 193.0 83 113.0 84 33.0 85 23.0 86 13.0 87 9.0 88 5.0 89 3.5 90 2.0 91 2.0 92 2.0 93 7.5 94 13.0 95 7.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1752634.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.144038595379406 #Duplication Level Percentage of deduplicated Percentage of total 1 70.97690388991079 24.234381457976486 2 11.053084243865293 7.547938700410331 3 4.231175741868798 4.33408283502604 4 2.183888246773027 2.9826705834325478 5 1.4770989760078659 2.5217062223003985 6 1.1390726387805683 2.333552408487863 7 0.9040582249902112 2.160773924857518 8 0.7428932732342524 2.029230127484644 9 0.6806581040025502 2.0916374915988762 >10 6.422188820699515 41.01546501078436 >50 0.12026445074321172 2.7600972347197974 >100 0.062484426783219124 3.7786322812151525 >500 0.004087756536047587 0.9693643616674711 >1k 0.002141205804596355 1.240467360038511 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGC 2666 0.1521139039867993 TruSeq Adapter, Index 21 (95% over 21bp) CTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGCT 2268 0.12940522664743467 TruSeq Adapter, Index 14 (95% over 23bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGC 2058 0.11742326121711663 No Hit GCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGC 1908 0.10886471448117518 TruSeq Adapter, Index 21 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.705697823960964E-5 0.0 0.0 0.1408736792735962 0.0 2 5.705697823960964E-5 0.0 0.0 0.5359361966046533 0.0 3 5.705697823960964E-5 0.0 0.0 0.749386352199033 0.0 4 1.1411395647921928E-4 0.0 0.0 1.0302207990943917 0.0 5 1.1411395647921928E-4 0.0 0.0 1.593487288275818 0.0 6 1.1411395647921928E-4 0.0 0.0 2.099354457348197 0.0 7 1.1411395647921928E-4 0.0 0.0 2.738050271762387 0.0 8 1.1411395647921928E-4 0.0 0.0 3.7218837475479765 0.0 9 1.1411395647921928E-4 0.0 0.0 4.233970127248472 0.0 10 1.1411395647921928E-4 0.0 0.0 5.18162947883015 0.0 11 1.1411395647921928E-4 0.0 0.0 6.775230881062447 0.0 12 1.1411395647921928E-4 0.0 0.0 8.350060537453912 0.0 13 1.1411395647921928E-4 0.0 0.0 8.812107947238271 0.0 14 1.1411395647921928E-4 0.0 0.0 9.006272844187663 0.0 15 1.1411395647921928E-4 0.0 0.0 9.261032252027519 0.0 16 1.1411395647921928E-4 0.0 0.0 9.782247748246354 0.0 17 1.1411395647921928E-4 0.0 0.0 10.529009479446366 0.0 18 1.1411395647921928E-4 0.0 0.0 11.322786160715815 0.0 19 1.1411395647921928E-4 0.0 0.0 11.910473036583793 0.0 20 1.1411395647921928E-4 0.0 0.0 12.550538218475735 0.0 21 1.1411395647921928E-4 0.0 0.0 13.419573054043228 0.0 22 1.7117093471882892E-4 0.0 0.0 14.38714529103053 0.0 23 1.7117093471882892E-4 0.0 0.0 15.252471423012448 0.0 24 2.2822791295843857E-4 0.0 0.0 15.933845857149867 0.0 25 2.2822791295843857E-4 0.0 0.0 16.511148362978236 0.0 26 2.2822791295843857E-4 0.0 0.0 17.045030508366263 0.0 27 2.2822791295843857E-4 0.0 0.0 17.681272872716153 0.0 28 2.2822791295843857E-4 0.0 0.0 18.271470255626674 0.0 29 2.2822791295843857E-4 0.0 0.0 18.98833413022913 0.0 30 2.852848911980482E-4 0.0 0.0 19.871918495247723 0.0 31 2.852848911980482E-4 0.0 0.0 20.483341074063382 0.0 32 2.852848911980482E-4 0.0 0.0 21.09721710294334 0.0 33 2.852848911980482E-4 0.0 0.0 21.706015060759977 0.0 34 3.4234186943765785E-4 0.0 0.0 22.41449155956121 0.0 35 3.4234186943765785E-4 0.0 0.0 23.240904832383716 0.0 36 3.4234186943765785E-4 0.0 0.0 23.898258278682256 0.0 37 3.4234186943765785E-4 0.0 0.0 24.5849960687742 0.0 38 3.4234186943765785E-4 0.0 0.0 25.488093920350742 0.0 39 3.4234186943765785E-4 0.0 0.0 27.375310532604068 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGATCG 30 2.1661563E-6 45.000004 9 GTCGATC 45 3.8562575E-10 45.0 30 TCGTTAG 210 0.0 41.785713 1 AATACGG 65 0.0 41.53846 5 TATGGGA 3565 0.0 40.771385 4 TAGGGTA 455 0.0 40.54945 5 TTAGGGA 4290 0.0 40.54196 4 TCTATCG 50 1.0822987E-9 40.5 2 TTATGGG 4995 0.0 40.225224 3 TAGGGAT 2500 0.0 40.14 5 CTAGGGA 2365 0.0 39.76744 4 TACGGGT 210 0.0 39.642857 4 ATGGGCG 655 0.0 39.50382 5 TAGGGAG 2565 0.0 39.473686 5 CTACGGG 850 0.0 39.441177 3 TACGGGA 1165 0.0 39.399143 4 TAGGGCG 675 0.0 39.333332 5 TTACGGG 1535 0.0 38.990227 3 TGGGCGA 1795 0.0 38.983288 6 CGTTAGG 475 0.0 38.842106 2 >>END_MODULE