##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934136.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1847239 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.042792513583784 33.0 31.0 34.0 30.0 34.0 2 32.26743696944467 34.0 31.0 34.0 30.0 34.0 3 32.3470476749354 34.0 31.0 34.0 30.0 34.0 4 35.7357889260675 37.0 35.0 37.0 35.0 37.0 5 29.53876406896996 37.0 35.0 37.0 0.0 37.0 6 23.6806065701298 35.0 10.0 37.0 0.0 37.0 7 30.410880238020095 35.0 19.0 37.0 17.0 37.0 8 34.36944867448121 35.0 32.0 37.0 32.0 37.0 9 37.00037677853272 38.0 37.0 39.0 34.0 39.0 10 37.03941882994025 39.0 37.0 39.0 34.0 39.0 11 37.2097779442725 39.0 37.0 39.0 34.0 39.0 12 37.147117400617894 39.0 37.0 39.0 34.0 39.0 13 37.05376618834921 39.0 37.0 39.0 33.0 39.0 14 37.91419680940041 40.0 37.0 41.0 33.0 41.0 15 37.85030848742366 40.0 37.0 41.0 33.0 41.0 16 38.15401363873327 40.0 37.0 41.0 33.0 41.0 17 38.20907635665986 40.0 37.0 41.0 33.0 41.0 18 38.29742226100683 40.0 37.0 41.0 34.0 41.0 19 38.310326384403965 40.0 37.0 41.0 34.0 41.0 20 38.24739245977375 40.0 37.0 41.0 34.0 41.0 21 38.121060133529014 40.0 37.0 41.0 34.0 41.0 22 38.25480135488694 40.0 37.0 41.0 34.0 41.0 23 38.229634606025535 40.0 37.0 41.0 34.0 41.0 24 38.20386858441165 40.0 37.0 41.0 34.0 41.0 25 37.970526282738724 40.0 36.0 41.0 34.0 41.0 26 37.88730857241537 40.0 36.0 41.0 34.0 41.0 27 37.04616240778805 40.0 36.0 41.0 33.0 41.0 28 37.36450453893622 40.0 36.0 41.0 33.0 41.0 29 37.625934705796055 40.0 36.0 41.0 33.0 41.0 30 37.65945121340552 40.0 36.0 41.0 33.0 41.0 31 37.66337815518187 40.0 36.0 41.0 33.0 41.0 32 37.704121123471296 40.0 36.0 41.0 33.0 41.0 33 36.51667542748935 40.0 35.0 41.0 31.0 41.0 34 36.94471153976286 40.0 35.0 41.0 31.0 41.0 35 37.24968182243879 40.0 35.0 41.0 31.0 41.0 36 37.38904169953103 40.0 35.0 41.0 32.0 41.0 37 37.46329846868759 40.0 35.0 41.0 33.0 41.0 38 37.38026156875207 39.0 35.0 41.0 33.0 41.0 39 37.44013254375855 40.0 35.0 41.0 33.0 41.0 40 37.42581495951526 40.0 35.0 41.0 33.0 41.0 41 37.31871024810542 40.0 35.0 41.0 33.0 41.0 42 37.370911398037826 40.0 35.0 41.0 33.0 41.0 43 37.246639985405245 39.0 35.0 41.0 33.0 41.0 44 37.27637571532433 39.0 35.0 41.0 33.0 41.0 45 37.194011711532724 39.0 35.0 41.0 33.0 41.0 46 37.14996705894581 39.0 35.0 41.0 33.0 41.0 47 37.08395015479859 39.0 35.0 41.0 32.0 41.0 48 37.01110359839739 39.0 35.0 41.0 32.0 41.0 49 37.01758299819352 39.0 35.0 41.0 32.0 41.0 50 36.93363771553113 39.0 35.0 41.0 32.0 41.0 51 36.16927208661142 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 21.0 10 42.0 11 32.0 12 29.0 13 29.0 14 34.0 15 52.0 16 88.0 17 143.0 18 267.0 19 424.0 20 748.0 21 1280.0 22 2112.0 23 3345.0 24 5108.0 25 7408.0 26 10163.0 27 12885.0 28 16196.0 29 21329.0 30 28979.0 31 41408.0 32 60186.0 33 98832.0 34 132493.0 35 151301.0 36 201885.0 37 314072.0 38 383830.0 39 352273.0 40 243.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.040852320679672 4.1639982698503015 55.293603047575324 16.501546361894697 2 19.921623569012997 4.093568834352242 53.23046990670942 22.754337689925343 3 21.779423236516767 4.1433728932747735 52.34081783678235 21.736386033426104 4 19.29555406744877 4.731872811260481 50.58798563694249 25.384587484348266 5 15.2895754149842 22.21910646104808 41.570148746318154 20.921169377649562 6 16.628871521227083 29.286573096388718 40.05058360071436 14.033971781669832 7 85.41953694134868 2.0046133716319328 8.31841467184268 4.257435015176704 8 87.48743394872022 2.039422078031051 6.302811926339796 4.170332046908928 9 82.09235513109023 5.041036920506768 8.286908191089513 4.579699757313483 10 38.65195570253768 33.57935816643109 14.708058892216979 13.060627238814252 11 30.217746593700113 23.61194193063269 26.70910477745435 19.461206698212845 12 27.627448316108527 21.186213586872082 30.072665204664904 21.113672892354483 13 26.988657125580396 21.927536176964647 31.72496899426658 19.35883770318838 14 21.414337830675944 23.649024300591314 34.1294223432918 20.80721552544094 15 19.710389397365475 22.989661868334306 35.6298778880264 21.670070846273816 16 24.979604696522756 24.41378727928546 29.678617655863697 20.927990368328082 17 25.409272974422908 23.141726652587998 28.528847647759708 22.920152725229386 18 26.778289111479346 21.58572875518544 30.011492827944842 21.62448930539037 19 25.747182687242958 24.00247071440133 28.506977169711124 21.743369428644588 20 24.782012506232274 28.10139889857241 27.980245111758684 19.136343483436633 21 24.536727516038802 25.755032240007925 30.918522183648133 18.789718060305134 22 22.976452965750507 22.423140698090503 32.03440377774614 22.566002558412855 23 21.591575318624173 24.466839429007294 30.864982820306412 23.07660243206212 24 21.742936349871346 26.109777890137657 29.414168929954382 22.73311683003661 25 24.0394989495133 26.167648041211777 26.086554040922692 23.706298968352225 26 22.16026188273418 25.183097585098622 26.7348729644621 25.9217675677051 27 21.350512846469787 25.91662475727288 29.887199220025128 22.845663176232204 28 19.21391871869314 25.40959778350284 29.931319120048894 25.445164377755127 29 21.85131431287451 25.364178647159356 29.051465457366373 23.73304158259976 30 25.88674232191936 23.24517834454556 29.372809907110014 21.49526942642506 31 24.177975887256604 25.12641840065092 29.11317918255299 21.582426529539493 32 25.295102582827667 25.312371598910588 27.273839497758544 22.118686320503194 33 24.82602413656273 26.404975208946972 26.168081119985015 22.60091953450528 34 22.10569395730601 24.40442195081416 30.859136256867682 22.630747835012144 35 22.30534327176938 26.804598646953643 28.47682406012433 22.41323402115265 36 25.885659624986264 25.966861894968652 26.750842744225302 21.396635735819782 37 22.6730812850963 27.132709952529154 27.843717028494957 22.35049173387959 38 22.017778966338412 27.388009889353786 28.395892464375212 22.19831867993259 39 22.61125929021637 24.627295114492494 27.32575481570062 25.435690779590516 40 25.078400791668 23.080608410714586 28.023228180002697 23.817762617614722 41 21.36123154610746 23.641878500832863 28.194023621198987 26.802866331860685 42 22.032936723401793 24.02212166373707 30.314052485899225 23.630889126961915 43 21.409628099016963 24.459368820168912 29.88806537757161 24.242937703242514 44 23.156938544498033 23.250591829211054 28.529984479539465 25.062485146751452 45 23.191151767583946 22.217753089881707 26.89105199706156 27.700043145472787 46 23.38414249590876 22.32618518773153 28.840068881178883 25.44960343518083 47 20.057177225036934 25.00542701837716 31.48937414162434 23.448021614961572 48 20.578062719550637 26.710133339540796 29.787591102180066 22.924212838728504 49 23.902321248089716 23.54259519206773 29.792300833839043 22.76278272600351 50 21.962020074283835 23.794484633553104 28.269325192895995 25.97417009926707 51 20.938817337659067 23.243662568839223 26.833885598993955 28.983634494507747 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 331.0 1 1005.0 2 1679.0 3 3792.5 4 5906.0 5 4181.0 6 2456.0 7 2385.5 8 2315.0 9 2359.5 10 2404.0 11 2397.5 12 2391.0 13 2336.5 14 2282.0 15 2318.5 16 2355.0 17 2427.0 18 2499.0 19 2979.5 20 3460.0 21 3720.5 22 3981.0 23 5518.5 24 7056.0 25 9255.5 26 14269.5 27 17084.0 28 20308.0 29 23532.0 30 26871.0 31 30210.0 32 34665.0 33 39120.0 34 44726.0 35 50332.0 36 54313.0 37 58294.0 38 63590.5 39 68887.0 40 76171.5 41 83456.0 42 93480.5 43 103505.0 44 115193.0 45 126881.0 46 142688.5 47 158496.0 48 178225.5 49 197955.0 50 193219.5 51 188484.0 52 170117.5 53 151751.0 54 137921.5 55 124092.0 56 112765.5 57 101439.0 58 91677.5 59 81916.0 60 70289.0 61 58662.0 62 51676.5 63 44691.0 64 38593.5 65 32496.0 66 27436.5 67 22377.0 68 17388.0 69 12399.0 70 10020.5 71 7642.0 72 6318.0 73 4994.0 74 4443.5 75 3140.5 76 2388.0 77 1712.0 78 1036.0 79 702.5 80 369.0 81 267.0 82 165.0 83 122.5 84 80.0 85 58.5 86 37.0 87 21.5 88 6.0 89 3.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1847239.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.954285503808656 #Duplication Level Percentage of deduplicated Percentage of total 1 71.62570396789869 25.752510098731097 2 11.525001705318678 8.287464034898187 3 4.334892357375366 4.675738723360561 4 2.1419432115092465 3.08048151038193 5 1.37248660484846 2.467338762043727 6 1.0073302722506738 2.1730704123078013 7 0.7592955151729929 1.9109949414003882 8 0.6493598147391573 1.8677814539065565 9 0.5764874419965326 1.865447467101329 >10 5.838454150363648 39.8262556918761 >50 0.11162577834909794 2.706493183000668 >100 0.052543987952563834 3.3991569984758483 >500 0.0034306908250089103 0.9004406730029706 >1k 0.0014445014000037519 1.0868260495128141 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCTGC 3654 0.19780872967710186 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCTGCT 3111 0.1684135079434767 TruSeq Adapter, Index 16 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCTGC 2319 0.12553870939277484 TruSeq Adapter, Index 13 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCTGC 2299 0.1244560124596763 TruSeq Adapter, Index 13 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.413484665492662E-5 0.0 0.0 0.1787532636545677 0.0 2 5.413484665492662E-5 0.0 0.0 0.6667247714020763 0.0 3 5.413484665492662E-5 0.0 0.0 0.9589446736453702 0.0 4 5.413484665492662E-5 0.0 0.0 1.2855402035145425 0.0 5 5.413484665492662E-5 0.0 0.0 1.8592071735167999 0.0 6 5.413484665492662E-5 0.0 0.0 2.385776826929271 0.0 7 5.413484665492662E-5 0.0 0.0 3.036098739794905 0.0 8 5.413484665492662E-5 0.0 0.0 4.058272914333229 0.0 9 5.413484665492662E-5 0.0 0.0 4.541426420728449 0.0 10 5.413484665492662E-5 0.0 0.0 5.413863609419247 0.0 11 5.413484665492662E-5 0.0 0.0 7.168373989505419 0.0 12 5.413484665492662E-5 0.0 0.0 8.795992289032442 0.0 13 5.413484665492662E-5 0.0 0.0 9.370850225661108 0.0 14 5.413484665492662E-5 0.0 0.0 9.583546038168315 0.0 15 5.413484665492662E-5 0.0 0.0 9.854599215369532 0.0 16 5.413484665492662E-5 0.0 0.0 10.453005810293092 0.0 17 5.413484665492662E-5 0.0 0.0 11.27358181588847 0.0 18 5.413484665492662E-5 0.0 0.0 12.15527606335726 0.0 19 5.413484665492662E-5 0.0 0.0 12.80733029131585 0.0 20 5.413484665492662E-5 0.0 0.0 13.548977690488345 0.0 21 1.0826969330985324E-4 0.0 0.0 14.543055879612762 0.0 22 1.0826969330985324E-4 0.0 0.0 15.635388815415872 0.0 23 1.0826969330985324E-4 0.0 0.0 16.63488048920578 0.0 24 1.6240453996477986E-4 0.0 0.0 17.384215036603276 0.0 25 1.6240453996477986E-4 0.0 0.0 18.040708321987573 0.0 26 1.6240453996477986E-4 0.0 0.0 18.63933145629775 0.0 27 1.6240453996477986E-4 0.0 0.0 19.327114683048592 0.0 28 2.1653938661970649E-4 0.0 0.0 19.977761404994155 0.0 29 2.1653938661970649E-4 0.0 0.0 20.735162044543234 0.0 30 2.1653938661970649E-4 0.0 0.0 21.629036632509383 0.0 31 2.1653938661970649E-4 0.0 0.0 22.28433895126727 0.0 32 2.1653938661970649E-4 0.0 0.0 22.950522374202798 0.0 33 2.1653938661970649E-4 0.0 0.0 23.60533747934079 0.0 34 2.1653938661970649E-4 0.0 0.0 24.371832773127895 0.0 35 2.1653938661970649E-4 0.0 0.0 25.1910554075569 0.0 36 2.1653938661970649E-4 0.0 0.0 25.8712056209294 0.0 37 2.706742332746331E-4 0.0 0.0 26.593743419232702 0.0 38 2.706742332746331E-4 0.0 0.0 27.473164003141985 0.0 39 2.706742332746331E-4 0.0 0.0 29.08134789271989 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCAACCG 20 7.0343993E-4 45.000004 44 TTAGGGA 5130 0.0 41.754387 4 TCGTTAG 305 0.0 41.311478 1 TATGGGA 4150 0.0 40.879517 4 TTATGGG 5430 0.0 40.77348 3 TAGGGAT 3025 0.0 40.31405 5 ATCGTCG 45 1.929402E-8 40.0 10 TAGGGAC 1940 0.0 39.896908 5 TTCGTAG 220 0.0 39.886364 1 CGCGAGG 175 0.0 39.857143 2 CGTTAGG 565 0.0 39.823006 2 TACGAAT 215 0.0 39.76744 12 CTAGGGT 460 0.0 39.619564 4 TTTATGG 3145 0.0 39.491257 2 CGGTCTA 40 3.459736E-7 39.375004 31 GCTACGA 225 0.0 39.0 10 TAGGGAG 2545 0.0 38.811394 5 TGGGCGA 1830 0.0 38.729507 6 CTAGGGA 2870 0.0 38.57143 4 CGATGTA 35 6.2503514E-6 38.571426 10 >>END_MODULE