##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934132.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 793453 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.956874572280903 33.0 31.0 34.0 30.0 34.0 2 32.184833884300645 33.0 31.0 34.0 30.0 34.0 3 32.244262735158856 34.0 31.0 34.0 30.0 34.0 4 35.67239017307894 37.0 35.0 37.0 33.0 37.0 5 29.617642128771333 37.0 35.0 37.0 0.0 37.0 6 23.726210626212264 35.0 10.0 37.0 0.0 37.0 7 30.383030878955655 35.0 19.0 37.0 17.0 37.0 8 34.257523760071486 35.0 32.0 37.0 32.0 37.0 9 36.86917183500472 38.0 37.0 39.0 34.0 39.0 10 36.969951591335594 39.0 37.0 39.0 34.0 39.0 11 37.14352204856495 39.0 37.0 39.0 34.0 39.0 12 37.17921918500529 39.0 37.0 39.0 34.0 39.0 13 37.137964063403885 39.0 37.0 39.0 33.0 39.0 14 38.28567161507991 40.0 38.0 41.0 34.0 41.0 15 38.15280048093586 40.0 37.0 41.0 33.0 41.0 16 38.3707793656335 40.0 38.0 41.0 34.0 41.0 17 38.3673500509797 40.0 38.0 41.0 34.0 41.0 18 38.43186552952727 40.0 38.0 41.0 34.0 41.0 19 38.44765096357314 40.0 38.0 41.0 34.0 41.0 20 38.42322859703095 40.0 38.0 41.0 34.0 41.0 21 38.28910219004781 40.0 37.0 41.0 34.0 41.0 22 38.34466565757518 40.0 37.0 41.0 34.0 41.0 23 38.307322550926145 40.0 37.0 41.0 34.0 41.0 24 38.30124405604365 40.0 37.0 41.0 34.0 41.0 25 38.05764550641311 40.0 37.0 41.0 34.0 41.0 26 37.92488275928127 40.0 37.0 41.0 34.0 41.0 27 37.08212836803188 40.0 36.0 41.0 33.0 41.0 28 37.47320887311536 40.0 36.0 41.0 33.0 41.0 29 37.775635103780566 40.0 36.0 41.0 33.0 41.0 30 37.77983068940441 40.0 36.0 41.0 33.0 41.0 31 37.84251745219944 40.0 37.0 41.0 33.0 41.0 32 37.8594762386682 40.0 37.0 41.0 34.0 41.0 33 36.712902969678105 40.0 36.0 41.0 32.0 41.0 34 37.204635939368806 40.0 36.0 41.0 32.0 41.0 35 37.48216718570602 40.0 36.0 41.0 32.0 41.0 36 37.57053158788233 40.0 36.0 41.0 33.0 41.0 37 37.65069890718165 40.0 36.0 41.0 33.0 41.0 38 37.62962393487705 40.0 36.0 41.0 33.0 41.0 39 37.68163961822565 40.0 36.0 41.0 33.0 41.0 40 37.62213388820762 40.0 36.0 41.0 33.0 41.0 41 37.54659948352328 40.0 36.0 41.0 33.0 41.0 42 37.583551892802724 40.0 36.0 41.0 33.0 41.0 43 37.456445435331396 40.0 36.0 41.0 33.0 41.0 44 37.44965990424134 39.0 36.0 41.0 33.0 41.0 45 37.369563162531364 39.0 35.0 41.0 33.0 41.0 46 37.30564381255096 39.0 35.0 41.0 33.0 41.0 47 37.26442145911604 39.0 35.0 41.0 33.0 41.0 48 37.21757054293071 39.0 35.0 41.0 33.0 41.0 49 37.26123916602496 39.0 35.0 41.0 33.0 41.0 50 37.17540295392418 39.0 35.0 41.0 33.0 41.0 51 36.4342550850523 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 12.0 10 14.0 11 10.0 12 4.0 13 10.0 14 23.0 15 24.0 16 22.0 17 53.0 18 96.0 19 158.0 20 282.0 21 461.0 22 754.0 23 1249.0 24 1901.0 25 2665.0 26 3669.0 27 4722.0 28 6110.0 29 8011.0 30 10967.0 31 16043.0 32 23207.0 33 37506.0 34 52506.0 35 70417.0 36 92797.0 37 141906.0 38 167708.0 39 150057.0 40 87.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.862290520043405 4.7091636177568175 54.984731294733265 18.443814567466504 2 20.037985866837733 4.319600530844297 53.49188924863854 22.150524353679423 3 21.078249121246 4.522133005987753 51.85650567834516 22.543112194421095 4 19.446520461829497 4.456470641613302 50.113743347116966 25.983265549440233 5 14.927160146851797 22.182788394523683 41.05271515767159 21.837336300952924 6 16.294222846217735 29.57150581067814 39.42199474953148 14.712276593572652 7 82.20272656351416 2.4455134708672097 9.623884464486238 5.7278755011323925 8 83.18400711825402 2.7173632212620027 7.840792082202727 6.25783757828126 9 77.14117912466145 5.756988756737954 10.70788061800762 6.393951500592977 10 38.687861788915036 26.49407085233782 17.573819747357437 17.24424761138971 11 25.368358302256087 24.268734253950768 26.96328579008461 23.39962165370854 12 23.236537009753572 21.190417075743618 33.555736760715504 22.017309153787306 13 22.614824066453842 23.07723330808504 33.51956574617526 20.788376879285856 14 18.72977983573066 25.146543021451805 33.60463694762009 22.519040195197448 15 16.628962269976924 23.73776392552552 37.11259520097599 22.520678603521567 16 19.279528844178547 23.09815452206999 32.958725973687166 24.6635906600643 17 19.45874550855564 23.370508398102977 30.32101460325942 26.849731490081957 18 20.465610439433714 22.368936786425913 32.83786185193074 24.327590922209634 19 22.32432166744596 23.544683806098156 30.407976275847464 23.723018250608416 20 23.726421098666208 24.586711500240092 29.86238630391466 21.82448109717904 21 23.92819738535238 24.2817154891342 30.157551865075817 21.632535260437606 22 22.47555935890343 23.626478190894733 28.59047731875738 25.30748513144446 23 21.632535260437606 24.43219699213438 28.407479712093846 25.527788035334165 24 22.23131048719962 22.89852076934614 29.229078470936525 25.64109027251772 25 21.19092120138181 24.64834085950901 28.131218862364875 26.029519076744307 26 21.70991854590001 25.590551677289014 28.204191048493104 24.495338728317872 27 20.00282310357387 26.91148688076042 30.512078220134022 22.573611795531683 28 18.959157001107815 23.22821893672341 33.37173090277559 24.440893159393184 29 20.186450867285146 21.765498397510626 32.831056155815155 25.216994579389073 30 22.34524288143091 23.307870787557675 31.021497177526587 23.32538915348483 31 22.31537343736806 24.86183806728313 28.092149125405037 24.730639369943777 32 22.307181395747445 25.016478606798387 28.751419428750037 23.924920568704135 33 21.91282911527211 25.09146729547938 28.10702083173168 24.88868275751683 34 20.746660482725503 22.37977548764703 30.582781840890387 26.290782188737076 35 21.709792514490463 22.00105110195563 30.425242578955526 25.863913804598383 36 23.575561501437388 22.40599002083299 30.005936079389706 24.012512398339915 37 19.873010751739546 23.72037159100791 32.90327215348609 23.503345503766447 38 19.444251896457633 24.222102632418054 32.13385039819624 24.199795072928076 39 22.43396899375262 22.361879027491234 30.47237832612644 24.731773652629705 40 23.726043004437567 21.69492080816381 29.465135301019718 25.113900886378904 41 20.021979877825153 22.19728200662169 29.845876189263887 27.934861926289265 42 21.013973102376575 21.229738875522557 30.930628531242554 26.82565949085831 43 21.94143824523948 20.829463118798465 31.346154088521942 25.88294454744011 44 21.360055352995072 21.511545107271633 30.96604335732551 26.16235618240778 45 22.266221187644387 20.97187861158758 29.474965750964454 27.286934449803578 46 23.311021572796374 20.789133067743144 31.734834955567624 24.165010403892857 47 19.119216891233634 21.449411622364526 34.121869852404615 25.309501633997222 48 19.51482948580445 20.649490265964083 33.8425842488465 25.99309599938497 49 21.201759902602927 19.582886446960313 33.95765092576372 25.25770272467304 50 21.363584232462415 19.415642766490265 31.825199476213463 27.39557352483386 51 19.93073313731248 19.415012609442524 29.6719528440878 30.98230140915719 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 159.0 1 439.0 2 719.0 3 1304.0 4 1889.0 5 1404.0 6 919.0 7 926.5 8 934.0 9 988.5 10 1043.0 11 1049.0 12 1055.0 13 1084.5 14 1114.0 15 1140.5 16 1167.0 17 1109.5 18 1052.0 19 1237.0 20 1422.0 21 1713.0 22 2004.0 23 2379.5 24 2755.0 25 3759.5 26 5743.5 27 6723.0 28 8153.0 29 9583.0 30 10665.0 31 11747.0 32 13779.5 33 15812.0 34 17579.5 35 19347.0 36 22034.0 37 24721.0 38 26851.5 39 28982.0 40 33459.5 41 37937.0 42 42701.5 43 47466.0 44 53649.5 45 59833.0 46 69094.5 47 78356.0 48 88579.5 49 98803.0 50 91641.5 51 84480.0 52 71443.0 53 58406.0 54 51095.5 55 43785.0 56 39417.0 57 35049.0 58 32584.0 59 30119.0 60 27284.5 61 24450.0 62 21725.0 63 19000.0 64 16566.5 65 14133.0 66 11654.5 67 9176.0 68 7591.5 69 6007.0 70 4848.5 71 3690.0 72 3047.5 73 2405.0 74 1756.0 75 839.0 76 571.0 77 452.0 78 333.0 79 318.0 80 303.0 81 199.0 82 95.0 83 61.0 84 27.0 85 17.0 86 7.0 87 4.5 88 2.0 89 1.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 793453.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.23162148865105 #Duplication Level Percentage of deduplicated Percentage of total 1 71.37812308042261 28.002795072614873 2 11.747285584423384 9.217301231343702 3 4.483645530494554 5.277020530249332 4 2.3814427585298676 3.737114435981312 5 1.5564230445410978 3.0530499879825115 6 1.137836071470832 2.6783492443246435 7 0.9402326382120234 2.5820795681526922 8 0.7554641446570065 2.3710466697144965 9 0.6450393596963607 2.2775346004400516 >10 4.855222338806969 33.80571762014587 >50 0.0788380902828649 2.1033377323585283 >100 0.03599129354709143 2.55880716302379 >500 0.002399419569805816 0.6271955333373007 >1k 0.0020566453455478427 1.708650610330991 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTGC 3702 0.46656827814627966 Illumina PCR Primer Index 5 (95% over 23bp) CTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTGCT 2873 0.36208823963108083 Illumina PCR Primer Index 5 (95% over 24bp) TCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTGC 2125 0.267816745289261 Illumina PCR Primer Index 5 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTGC 1621 0.2042969148771257 Illumina PCR Primer Index 5 (95% over 23bp) CCTGTATCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTGC 1310 0.16510114650773267 Illumina PCR Primer Index 5 (95% over 23bp) CTGTCACTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTGCT 1075 0.1354837652639791 Illumina PCR Primer Index 5 (95% over 24bp) TCTGTATCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTGC 844 0.10637050965841706 Illumina PCR Primer Index 5 (95% over 23bp) CGCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTG 824 0.10384988146745933 Illumina PCR Primer Index 5 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2603140954788752E-4 0.0 0.0 0.3851519875783443 0.0 2 1.2603140954788752E-4 0.0 0.0 1.4169711375468994 0.0 3 1.2603140954788752E-4 0.0 0.0 1.9616788896128694 0.0 4 1.2603140954788752E-4 0.0 0.0 2.517603437128601 0.0 5 1.2603140954788752E-4 0.0 0.0 3.418728015395997 0.0 6 1.2603140954788752E-4 0.0 0.0 4.078250381560093 0.0 7 1.2603140954788752E-4 0.0 0.0 4.93450777802844 0.0 8 1.2603140954788752E-4 0.0 0.0 6.2781286352184695 0.0 9 1.2603140954788752E-4 0.0 0.0 6.881693055543303 0.0 10 1.2603140954788752E-4 0.0 0.0 8.02668841128586 0.0 11 1.2603140954788752E-4 0.0 0.0 10.36608343531375 0.0 12 1.2603140954788752E-4 0.0 0.0 12.524119261002227 0.0 13 1.2603140954788752E-4 0.0 0.0 13.1909514489201 0.0 14 1.2603140954788752E-4 0.0 0.0 13.417429891877653 0.0 15 1.2603140954788752E-4 0.0 0.0 13.774854969355463 0.0 16 1.2603140954788752E-4 0.0 0.0 14.62166001010772 0.0 17 1.2603140954788752E-4 0.0 0.0 15.874034126785077 0.0 18 1.2603140954788752E-4 0.0 0.0 17.292643672656098 0.0 19 1.2603140954788752E-4 0.0 0.0 18.18393780097876 0.0 20 1.2603140954788752E-4 0.0 0.0 19.125140367482384 0.0 21 1.2603140954788752E-4 0.0 0.0 20.40877027372762 0.0 22 1.2603140954788752E-4 0.0 0.0 21.706011572204023 0.0 23 1.2603140954788752E-4 0.0 0.0 22.888312225172758 0.0 24 1.2603140954788752E-4 0.0 0.0 23.824725598113563 0.0 25 1.2603140954788752E-4 0.0 0.0 24.634351373049192 0.0 26 1.2603140954788752E-4 0.0 0.0 25.361048480502312 0.0 27 1.2603140954788752E-4 0.0 0.0 26.05775011248303 0.0 28 1.2603140954788752E-4 0.0 0.0 26.760501252122054 0.0 29 1.2603140954788752E-4 0.0 0.0 27.546559153472227 0.0 30 2.5206281909577504E-4 0.0 0.0 28.414285408209434 0.0 31 2.5206281909577504E-4 0.0 0.0 29.199587121102322 0.0 32 3.780942286436626E-4 0.0 0.0 29.97594060391731 0.0 33 3.780942286436626E-4 0.0 0.0 30.713980538229738 0.0 34 3.780942286436626E-4 0.0 0.0 31.467018210278365 0.0 35 3.780942286436626E-4 0.0 0.0 32.28269349287229 0.0 36 3.780942286436626E-4 0.0 0.0 33.03421878800635 0.0 37 3.780942286436626E-4 0.0 0.0 33.77856029279617 0.0 38 3.780942286436626E-4 0.0 0.0 34.48937744264626 0.0 39 3.780942286436626E-4 0.0 0.0 35.24354939738082 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAA 20 7.0319657E-4 45.0 45 TTTAGCG 35 1.2112832E-7 45.0 2 AAGTACG 20 7.0319657E-4 45.0 16 CGCATTA 25 3.8897095E-5 45.0 14 AACGCCC 20 7.0319657E-4 45.0 39 CGAATGC 35 1.2112832E-7 45.0 15 CGTAAGG 50 2.1827873E-11 45.0 2 GTGCGTT 20 7.0319657E-4 45.0 21 CCGTTAG 40 6.8102963E-9 45.0 1 GCGTAAG 20 7.0319657E-4 45.0 1 TCTATCG 25 3.8897095E-5 45.0 2 CCGTATG 30 2.1646483E-6 44.999996 1 TCTACGG 200 0.0 43.875 2 CGTTTAT 165 0.0 43.636364 1 TGTTACG 110 0.0 42.954544 1 CGTTAGG 235 0.0 42.12766 2 CGAGGGT 70 0.0 41.785713 4 TACGGGC 245 0.0 41.32653 4 TTCACGG 235 0.0 41.17021 2 TAGGCGT 50 1.0804797E-9 40.5 4 >>END_MODULE