##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934131.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1419255 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.98259720768995 33.0 31.0 34.0 30.0 34.0 2 32.19578229423183 33.0 31.0 34.0 30.0 34.0 3 32.26923350631141 34.0 31.0 34.0 30.0 34.0 4 35.69771816903939 37.0 35.0 37.0 35.0 37.0 5 29.54015381309208 37.0 35.0 37.0 0.0 37.0 6 23.629113866077624 35.0 10.0 37.0 0.0 37.0 7 30.34350063941998 35.0 19.0 37.0 17.0 37.0 8 34.24259417793138 35.0 32.0 37.0 32.0 37.0 9 36.89432836241549 38.0 37.0 39.0 34.0 39.0 10 37.008646790041254 39.0 37.0 39.0 34.0 39.0 11 37.16875050642767 39.0 37.0 39.0 34.0 39.0 12 37.03998788096572 39.0 37.0 39.0 34.0 39.0 13 36.92068092062385 39.0 37.0 39.0 33.0 39.0 14 37.72026732334922 40.0 37.0 41.0 33.0 41.0 15 37.68844288024351 40.0 37.0 41.0 33.0 41.0 16 38.02810488601414 40.0 37.0 41.0 33.0 41.0 17 38.088204727127966 40.0 37.0 41.0 33.0 41.0 18 38.17772352396152 40.0 37.0 41.0 34.0 41.0 19 38.19002575294785 40.0 37.0 41.0 34.0 41.0 20 38.10386505596246 40.0 37.0 41.0 33.0 41.0 21 37.98071171142607 40.0 37.0 41.0 33.0 41.0 22 38.13064882632085 40.0 37.0 41.0 34.0 41.0 23 38.110648896780354 40.0 36.0 41.0 34.0 41.0 24 38.07336666067761 40.0 36.0 41.0 34.0 41.0 25 37.84505744210871 40.0 36.0 41.0 34.0 41.0 26 37.74392480561985 40.0 36.0 41.0 33.0 41.0 27 36.913728681597036 39.0 35.0 41.0 33.0 41.0 28 37.26290765225418 39.0 35.0 41.0 33.0 41.0 29 37.53035782857908 40.0 35.0 41.0 33.0 41.0 30 37.51382521111428 39.0 35.0 41.0 33.0 41.0 31 37.483858785066815 39.0 35.0 41.0 33.0 41.0 32 37.52362049103227 39.0 35.0 41.0 33.0 41.0 33 36.35382436560026 39.0 35.0 41.0 31.0 41.0 34 36.749060598694385 39.0 35.0 41.0 31.0 41.0 35 37.06229042701981 39.0 35.0 41.0 31.0 41.0 36 37.203037509115696 39.0 35.0 41.0 32.0 41.0 37 37.27503514167644 39.0 35.0 41.0 33.0 41.0 38 37.2328806310353 39.0 35.0 41.0 33.0 41.0 39 37.2611729393238 39.0 35.0 41.0 33.0 41.0 40 37.129477789403595 39.0 35.0 41.0 33.0 41.0 41 37.0024576274172 39.0 35.0 41.0 32.0 41.0 42 37.11993686828653 39.0 35.0 41.0 33.0 41.0 43 37.074557426255325 39.0 35.0 41.0 33.0 41.0 44 37.11050163642192 39.0 35.0 41.0 33.0 41.0 45 37.03270377768618 39.0 35.0 41.0 33.0 41.0 46 36.980050801300685 39.0 35.0 40.0 33.0 41.0 47 36.91742005488795 39.0 35.0 40.0 32.0 41.0 48 36.86989793941188 39.0 35.0 40.0 32.0 41.0 49 36.90250659677084 39.0 35.0 40.0 33.0 41.0 50 36.802991710439635 39.0 35.0 40.0 32.0 41.0 51 36.04437116656274 38.0 34.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 7.0 10 10.0 11 25.0 12 11.0 13 23.0 14 35.0 15 52.0 16 70.0 17 123.0 18 212.0 19 381.0 20 663.0 21 1058.0 22 1764.0 23 2689.0 24 4087.0 25 5827.0 26 7819.0 27 9935.0 28 12747.0 29 16778.0 30 23235.0 31 33435.0 32 49591.0 33 82044.0 34 109343.0 35 123991.0 36 163506.0 37 245988.0 38 282394.0 39 241278.0 40 130.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.715322475524133 4.676890340354623 52.64656457084879 16.961222613272454 2 20.84234334210554 4.998397046337692 51.52280597919331 22.63645363236346 3 22.110896209631107 5.23056110424131 49.75187686497494 22.906665821152647 4 19.724503348587817 4.680765612944819 49.60863269814092 25.986098340326443 5 16.009948881631562 22.462700501319354 40.00620043614431 21.521150180904772 6 16.793035782857906 30.10220150712874 39.21620850375726 13.8885542062561 7 82.6000260700156 2.3765989903153413 9.894486896294183 5.128888043374869 8 83.78311156205193 3.054137558085052 7.824386738112602 5.338364141750426 9 78.31890675037255 4.799137575699927 10.365649583760494 6.516306090167025 10 41.79093961268412 25.168133985788323 17.663915223127628 15.377011178399936 11 32.70194573913779 22.46396877234887 24.958235130402922 19.875850358110416 12 28.59457955053884 20.230332110860978 29.903505712504096 21.271582626096087 13 27.823188926584724 20.274157920881024 31.685074211470106 20.217578941064147 14 21.565610126439573 22.602562612074646 34.42362366170984 21.408203599775938 15 19.20951485110146 22.22363141225502 36.556996452364096 22.009857284279427 16 25.22485388460847 22.808445275866564 29.33257237071562 22.63412846880934 17 25.223162856569115 22.698810291314807 28.424278935075094 23.65374791704098 18 26.094535513350316 21.438360266477837 30.014690806091927 22.45241341407992 19 25.676992506632 23.14531215320714 28.294281154549395 22.883414185611464 20 24.314728501925305 27.97967947972704 28.06556961222613 19.64002240612152 21 23.8091815776587 25.21428495936248 31.47369570655027 19.502837756428548 22 22.816618578056797 21.238396200823672 32.641139189222514 23.303846031897017 23 21.682713818165166 23.56968973158453 31.243786352699125 23.50381009755118 24 22.083346544489892 25.52409538807332 28.732327876244927 23.660230191191857 25 24.299156952062877 24.727409803030465 25.9839140957756 24.98951914913106 26 21.153210663340978 24.28908124332837 27.596661628812296 26.961046464518358 27 20.644774899507134 25.119657848660037 30.033151195521597 24.202416056311236 28 18.47899073809851 24.7043695459942 29.19116015092425 27.625479564983035 29 20.888071558669864 24.82309380625751 28.49734543827572 25.791489196796913 30 23.498102877918345 23.29968892130026 28.7984188887832 24.403789311998196 31 22.85191878837841 25.67600607360904 27.994475975071424 23.47759916294112 32 24.10377275401531 25.430313791390553 25.810724640744613 24.65518881384952 33 23.00784566550761 25.749002117308024 24.522302193756584 26.720850023427783 34 19.658341876547908 24.920257459018995 29.634279956737863 25.787120707695234 35 19.42378219558853 26.667441721184705 27.36252470486276 26.546251378364 36 22.577197191484263 26.13885453988184 25.642960567339905 25.640987701293987 37 20.048123839620082 28.7447992080352 25.56312995198185 25.643947000362864 38 21.195979580836426 26.96985390222335 25.320044671324037 26.514121845616184 39 20.51167690090928 23.232752394742313 25.96214210976886 30.293428594579552 40 22.488206840913012 24.0141482679293 27.792750421876267 25.70489446928142 41 19.560050871760186 25.248175979651293 26.502707406350517 28.689065742238007 42 19.53954715678296 23.997167528034076 29.10653828945468 27.35674702572829 43 20.52295042117167 22.2745736319407 29.20708399829488 27.995391948592747 44 21.429059612261362 22.059883530443788 28.34825313280559 28.162803724489255 45 20.646536387048133 21.62331645828269 26.876354143547143 30.853793011122033 46 20.633994595756224 22.47038058699811 28.908617549348076 27.987007267897596 47 17.116515354886893 25.30426174295669 31.386819141028216 26.192403761128197 48 18.14571729534157 26.48347196240281 28.47641896628865 26.89439177596697 49 21.644172470768115 23.067524863396642 28.981754512050333 26.30654815378491 50 19.51946619881558 23.522411405984126 27.325603926003435 29.632518469196867 51 18.507738214767606 24.085664662093844 25.649090543982584 31.757506579155965 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 249.0 1 850.5 2 1452.0 3 2726.5 4 4001.0 5 2889.0 6 1777.0 7 1804.5 8 1832.0 9 1833.5 10 1835.0 11 1893.0 12 1951.0 13 2089.5 14 2228.0 15 2161.0 16 2094.0 17 2097.5 18 2101.0 19 2153.5 20 2206.0 21 2669.5 22 3133.0 23 3810.0 24 4487.0 25 5579.0 26 8466.0 27 10261.0 28 12454.0 29 14647.0 30 17294.0 31 19941.0 32 22773.5 33 25606.0 34 28590.0 35 31574.0 36 33879.5 37 36185.0 38 40306.5 39 44428.0 40 49679.0 41 54930.0 42 63049.5 43 71169.0 44 82171.5 45 93174.0 46 111775.0 47 130376.0 48 145677.5 49 160979.0 50 156779.5 51 152580.0 52 136032.0 53 119484.0 54 107873.5 55 96263.0 56 88754.0 57 81245.0 58 72624.0 59 64003.0 60 56959.0 61 49915.0 62 44463.5 63 39012.0 64 34203.0 65 29394.0 66 24876.5 67 20359.0 68 17478.0 69 14597.0 70 12025.5 71 9454.0 72 7847.0 73 6240.0 74 5150.5 75 2937.0 76 1813.0 77 1396.5 78 980.0 79 657.0 80 334.0 81 239.0 82 144.0 83 114.5 84 85.0 85 45.0 86 5.0 87 2.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1419255.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.60083418761355 #Duplication Level Percentage of deduplicated Percentage of total 1 70.86769586820317 25.938167857303302 2 11.091835964457427 8.119408979426298 3 4.23197012563717 4.646809105661403 4 2.3312876921231696 3.4130829705209753 5 1.5951952916031495 2.9192739182414362 6 1.2628621130519075 2.773308408097929 7 1.0555628445194998 2.704413645280474 8 0.9033286200951359 2.645006483282226 9 0.773795366798262 2.548940032379411 >10 5.7429527201486685 36.3701054445755 >50 0.08976380152946888 2.2746853847330137 >100 0.04818190651032865 3.121234292210201 >500 0.0029979844045312874 0.7860495957468153 >1k 0.0025697009181696747 1.739513882541113 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 3659 0.2578113165005584 RNA PCR Primer, Index 16 (95% over 23bp) CTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGCT 3549 0.25006077132016447 RNA PCR Primer, Index 16 (95% over 24bp) GCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 2478 0.17459864506378348 RNA PCR Primer, Index 14 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 2374 0.16727085689322918 RNA PCR Primer, Index 14 (95% over 23bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGC 1614 0.11372163564687106 No Hit CTGTCACTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGCT 1461 0.1029413318959595 RNA PCR Primer, Index 16 (95% over 24bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.409190032798898E-4 0.0 0.0 0.2729601093531465 0.0 2 1.409190032798898E-4 0.0 0.0 0.939859292375225 0.0 3 1.409190032798898E-4 0.0 0.0 1.30427583485702 0.0 4 1.409190032798898E-4 0.0 0.0 1.7292875487491677 0.0 5 1.409190032798898E-4 0.0 0.0 2.525620836283825 0.0 6 1.409190032798898E-4 0.0 0.0 3.1715230878172 0.0 7 1.409190032798898E-4 0.0 0.0 4.008441048296465 0.0 8 2.113785049198347E-4 0.0 0.0 5.241130029487302 0.0 9 2.113785049198347E-4 0.0 0.0 5.826014352600484 0.0 10 2.113785049198347E-4 0.0 0.0 6.96985390222335 0.0 11 2.818380065597796E-4 0.0 0.0 8.94004248707949 0.0 12 2.818380065597796E-4 0.0 0.0 10.75367005929167 0.0 13 2.818380065597796E-4 0.0 0.0 11.322982832542426 0.0 14 2.818380065597796E-4 0.0 0.0 11.563813409147757 0.0 15 2.818380065597796E-4 0.0 0.0 11.920690784954077 0.0 16 2.818380065597796E-4 0.0 0.0 12.621410528763331 0.0 17 2.818380065597796E-4 0.0 0.0 13.535622562541615 0.0 18 2.818380065597796E-4 0.0 0.0 14.469281418772525 0.0 19 2.818380065597796E-4 0.0 0.0 15.183529386896646 0.0 20 2.818380065597796E-4 0.0 0.0 15.930047806771862 0.0 21 2.818380065597796E-4 0.0 0.0 16.97010051047909 0.0 22 2.818380065597796E-4 0.0 0.0 18.07032562858683 0.0 23 2.818380065597796E-4 0.0 0.0 19.02765887736876 0.0 24 2.818380065597796E-4 0.0 0.0 19.79566744524416 0.0 25 2.818380065597796E-4 0.0 0.0 20.47376968902699 0.0 26 2.818380065597796E-4 0.0 0.0 21.083032999707594 0.0 27 2.818380065597796E-4 0.0 0.0 21.79093961268412 0.0 28 2.818380065597796E-4 0.0 0.0 22.44367643587657 0.0 29 2.818380065597796E-4 0.0 0.0 23.219365089430724 0.0 30 2.818380065597796E-4 0.0 0.0 24.10370229451367 0.0 31 2.818380065597796E-4 0.0 0.0 24.75841198375204 0.0 32 2.818380065597796E-4 0.0 0.0 25.386628900373786 0.0 33 3.522975081997245E-4 0.0 0.0 26.032601611408804 0.0 34 3.522975081997245E-4 0.0 0.0 26.807726588949837 0.0 35 3.522975081997245E-4 0.0 0.0 27.638162275278226 0.0 36 3.522975081997245E-4 0.0 0.0 28.304427322785546 0.0 37 3.522975081997245E-4 0.0 0.0 29.022761942004784 0.0 38 3.522975081997245E-4 0.0 0.0 29.90829695861561 0.0 39 3.522975081997245E-4 0.0 0.0 31.56099502908216 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGGG 45 3.8562575E-10 45.0 3 ATCGTAC 20 7.033847E-4 45.0 11 CGTACTC 20 7.033847E-4 45.0 13 CCCGATA 30 2.1658652E-6 44.999996 25 CCGATGA 115 0.0 43.04348 18 ACGGGTA 110 0.0 40.909092 5 CGTTAGG 325 0.0 40.846153 2 CGTTATT 265 0.0 40.75472 1 GCGTTAG 105 0.0 40.714287 1 TTAGGGA 2465 0.0 40.61866 4 TATGGGA 2145 0.0 40.069927 4 TAATACG 45 1.9288564E-8 40.0 4 AATACGG 45 1.9288564E-8 40.0 5 TAGGGAT 1375 0.0 39.927273 5 TCGTTAG 175 0.0 39.857143 1 TCAAGCG 260 0.0 39.80769 17 TTATGGG 3565 0.0 39.57223 3 CCGTTAG 40 3.4589902E-7 39.375 1 AGGCACG 425 0.0 39.17647 10 TTTCGCG 305 0.0 39.098362 1 >>END_MODULE