##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934130.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2162199 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.93973727672615 33.0 31.0 34.0 30.0 34.0 2 32.15101385210149 33.0 31.0 34.0 30.0 34.0 3 32.21457645665362 34.0 31.0 34.0 30.0 34.0 4 35.7142899427851 37.0 35.0 37.0 35.0 37.0 5 29.243830933230473 37.0 35.0 37.0 0.0 37.0 6 23.474647338195975 35.0 10.0 37.0 0.0 37.0 7 30.291894039355306 35.0 19.0 37.0 17.0 37.0 8 34.136206704378274 35.0 32.0 37.0 32.0 37.0 9 36.87570663014829 38.0 37.0 39.0 34.0 39.0 10 37.02555315213817 39.0 37.0 39.0 34.0 39.0 11 37.18593339465979 39.0 37.0 39.0 34.0 39.0 12 37.18158828118966 39.0 37.0 39.0 34.0 39.0 13 37.135177196918505 39.0 37.0 39.0 34.0 39.0 14 38.222826853587485 40.0 38.0 41.0 33.0 41.0 15 38.0955823215162 40.0 38.0 41.0 33.0 41.0 16 38.36568743210037 40.0 38.0 41.0 34.0 41.0 17 38.36071009190181 40.0 38.0 41.0 34.0 41.0 18 38.39476199924244 40.0 38.0 41.0 34.0 41.0 19 38.363855038319784 40.0 37.0 41.0 34.0 41.0 20 38.217832863672584 40.0 37.0 41.0 34.0 41.0 21 38.125563835706146 40.0 37.0 41.0 34.0 41.0 22 38.20887716625528 40.0 37.0 41.0 34.0 41.0 23 38.11002733790923 40.0 37.0 41.0 34.0 41.0 24 38.09776713429245 40.0 37.0 41.0 34.0 41.0 25 37.868030648427826 40.0 36.0 41.0 33.0 41.0 26 37.758203569606685 40.0 36.0 41.0 33.0 41.0 27 36.82357405585702 40.0 35.0 41.0 32.0 41.0 28 37.17039920932347 40.0 35.0 41.0 32.0 41.0 29 37.460130635524294 40.0 35.0 41.0 32.0 41.0 30 37.40837591729531 39.0 35.0 41.0 33.0 41.0 31 37.36546543588263 39.0 35.0 41.0 33.0 41.0 32 37.279395189804454 39.0 35.0 41.0 32.0 41.0 33 35.880827805396265 39.0 35.0 41.0 30.0 41.0 34 36.24670393428172 39.0 35.0 41.0 29.0 41.0 35 36.50657594421235 39.0 35.0 41.0 30.0 41.0 36 36.58518711737449 39.0 35.0 41.0 31.0 41.0 37 36.6485374380434 39.0 35.0 41.0 31.0 41.0 38 36.60717908018642 39.0 35.0 41.0 31.0 41.0 39 36.60047895683977 39.0 35.0 41.0 31.0 41.0 40 36.48642793748402 39.0 35.0 41.0 31.0 41.0 41 36.372943008483496 39.0 35.0 41.0 30.0 41.0 42 36.45672391856624 39.0 35.0 41.0 31.0 41.0 43 36.348565048822984 39.0 35.0 41.0 31.0 41.0 44 36.386914432945346 39.0 35.0 41.0 31.0 41.0 45 36.292490191698356 39.0 35.0 41.0 31.0 41.0 46 36.201580428073456 39.0 35.0 40.0 30.0 41.0 47 36.09147122905893 39.0 35.0 40.0 30.0 41.0 48 36.04541718870465 39.0 35.0 40.0 30.0 41.0 49 36.05735041039238 39.0 35.0 40.0 30.0 41.0 50 35.93122187180736 38.0 35.0 40.0 30.0 41.0 51 35.18836009081495 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 2.0 9 10.0 10 14.0 11 24.0 12 24.0 13 27.0 14 42.0 15 80.0 16 113.0 17 223.0 18 416.0 19 981.0 20 2044.0 21 3517.0 22 5580.0 23 8396.0 24 12814.0 25 17893.0 26 22463.0 27 24142.0 28 25204.0 29 29105.0 30 36815.0 31 49780.0 32 70072.0 33 108082.0 34 148341.0 35 186949.0 36 251945.0 37 370080.0 38 423545.0 39 363198.0 40 276.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.25715764367665 4.297014289619041 50.89730408718162 18.5485239795227 2 22.345399290259593 7.878645767572736 49.16684356990268 20.609111372264994 3 19.146156297362083 7.85889735403633 52.09155124019574 20.90339510840584 4 17.27680939635991 4.357277012892893 54.03596061232106 24.32995297842613 5 16.63302036491553 23.274268464651033 40.22927584371281 19.863435326720623 6 15.58450447900494 31.722935770481808 39.39734501773426 13.29521473277899 7 78.27364641274924 2.0220617991220973 14.54449844810769 5.15979334002097 8 79.71592808987516 4.519288002630655 11.21233521983869 4.552448687655484 9 74.73562794173894 4.544216327914313 12.495334610736569 8.224821119610175 10 39.7158170917663 24.90871561775766 20.165488930482347 15.209978359993691 11 29.735237135897297 23.05375222169652 27.441738711376708 19.769271931029476 12 24.241940727934846 20.651521899695634 32.353081284377616 22.7534560879919 13 24.188985380161583 20.325649951738946 35.64815264459932 19.83721202350015 14 20.770243626974207 23.22131311687777 34.56078742058432 21.4476558355637 15 18.63135631826673 22.398215890396767 37.36159345185157 21.608834339484943 16 22.04713812188425 23.09727273021586 31.887259220821022 22.96832992707887 17 22.280419147358778 23.891094205482474 31.047789773281735 22.780696873877012 18 22.619009628623452 22.84900696004392 31.85456102791649 22.677422383416143 19 22.81482879235445 24.757526943634698 30.082568718235464 22.34507554577539 20 23.540987670422563 26.29272328772699 31.1615628348732 19.00472620697725 21 23.582288216764507 26.341377458781544 31.117487335809518 18.95884698864443 22 23.035067540036785 21.745963253151075 32.4184776701867 22.800491536625444 23 21.749431944053253 24.764556823863114 31.417043482121677 22.06896774996196 24 21.764092944266462 24.6733071285298 30.306276156819976 23.256323770383762 25 22.113043249025644 27.184176849586926 27.573780211719644 23.128999689667786 26 21.497928729039277 24.889938437673866 29.46421675340706 24.14791607987979 27 21.730377268697286 26.31843784961514 29.332730243608474 22.618454638079104 28 20.297530430825283 24.78120654019357 30.62604320878883 24.29521982019231 29 23.04366989347419 24.215439929442205 29.262061447628085 23.478828729455522 30 22.92823186024968 26.866306015311263 28.974021355111162 21.231440769327893 31 23.216179454342548 27.103240728536086 27.53312715434611 22.147452662775258 32 25.590752747550066 27.395304502499542 26.012730558103115 21.001212191847284 33 23.081363001277865 29.31631177333816 24.99224169468213 22.610083530701846 34 23.039692461239692 27.372041148848925 27.25151570230122 22.33675068761016 35 24.6916218164933 27.52475604696885 25.56411320142133 22.21950893511652 36 24.005422257618285 28.929807108411392 24.78527647085213 22.279494163118198 37 22.145510195870038 29.418245036650188 26.588995739985076 21.847249027494694 38 23.11618865793574 27.76210700310193 25.939471806249102 23.182232532713222 39 23.778616121827824 26.550655143213 26.19999361760874 23.47073511735044 40 23.772233730567816 25.802574138643113 28.169377564229748 22.255814566559323 41 21.825743143901185 26.646992251869513 26.633487481957026 24.89377712227228 42 22.906725976656173 23.87046705691752 29.075492126302898 24.147314840123414 43 22.244437260400176 24.14884106412037 28.52040908353024 25.086312591949216 44 22.667571301253954 24.131173865125273 28.125163317529978 25.07609151609079 45 22.606152347679377 23.550607506524607 27.061708936134 26.781531209662013 46 24.05264270309995 24.7326911167751 27.33342305680467 23.881243123320285 47 20.487614692264682 25.63751070091143 31.303131672894125 22.571742933929766 48 20.98816991405509 26.330693890802838 28.415377123012263 24.265759072129807 49 22.838600887337382 23.813950519818018 29.968518161371826 23.378930431472774 50 21.806827216181304 24.24906310658732 28.838141170169813 25.10596850706156 51 21.02072935932354 23.706744846334683 27.418244111665945 27.85428168267583 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 454.0 1 1209.5 2 1965.0 3 13292.0 4 24619.0 5 16922.0 6 9225.0 7 8892.5 8 8560.0 9 8722.5 10 8885.0 11 8842.0 12 8799.0 13 8650.0 14 8501.0 15 8273.5 16 8046.0 17 7578.5 18 7111.0 19 7042.5 20 6974.0 21 7251.0 22 7528.0 23 8711.0 24 9894.0 25 10963.5 26 14916.5 27 17800.0 28 20829.5 29 23859.0 30 29744.0 31 35629.0 32 38875.0 33 42121.0 34 47704.5 35 53288.0 36 58777.5 37 64267.0 38 71103.0 39 77939.0 40 84737.5 41 91536.0 42 100610.5 43 109685.0 44 128067.0 45 146449.0 46 190902.0 47 235355.0 48 227392.0 49 219429.0 50 210514.5 51 201600.0 52 176849.0 53 152098.0 54 135650.5 55 119203.0 56 111596.0 57 103989.0 58 95811.0 59 87633.0 60 80102.0 61 72571.0 62 65918.5 63 59266.0 64 52168.0 65 45070.0 66 38349.5 67 31629.0 68 25882.0 69 20135.0 70 16386.0 71 12637.0 72 10185.0 73 7733.0 74 6092.5 75 3347.0 76 2242.0 77 1750.5 78 1259.0 79 860.0 80 461.0 81 324.5 82 188.0 83 130.0 84 72.0 85 39.0 86 6.0 87 3.5 88 1.0 89 1.5 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2162199.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.49407680837823 #Duplication Level Percentage of deduplicated Percentage of total 1 75.21285181860078 29.704621467009893 2 9.896890846645956 7.817371345231418 3 3.5214323811084616 4.172271628050235 4 1.9059682058439442 3.010978188637103 5 1.2894562768333402 2.546294261915068 6 0.9494558495134217 2.2498729348108246 7 0.7625567180682331 2.1081531515892133 8 0.6891437072416104 2.177367560464855 9 0.6008258231209723 2.135615508611708 >10 5.069802213119081 34.76901466477084 >50 0.06802380532698658 1.8270149270910092 >100 0.027419599949966362 1.8849763235673853 >500 0.0025839437974237074 0.6968346587865404 >1k 0.0030146010969943253 2.638231552515895 >5k 2.8710486638041196E-4 1.0067846286495308 >10k+ 2.8710486638041196E-4 1.2545971982985396 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGC 11369 0.5258072915582701 No Hit GAATCTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTCTTC 10760 0.4976415214325786 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCG 9551 0.44172622408945705 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8207 0.37956728312241383 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGAAGAAGCT 3391 0.15683107799050874 No Hit CTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTCTTCTGCT 3182 0.14716499267643726 Illumina PCR Primer Index 8 (95% over 24bp) GCTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTCTTCTGC 3078 0.14235507462541608 RNA PCR Primer, Index 40 (95% over 24bp) CCTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTCTTCTGC 3021 0.1397188695397602 Illumina PCR Primer Index 8 (95% over 23bp) GAATGATCTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTC 2784 0.12875780628887537 No Hit GAATGACTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTCT 2730 0.12626034883930665 No Hit CGCTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTCTTCTG 2668 0.12339289769350555 Illumina PCR Primer Index 8 (95% over 22bp) CGTTCTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTCTTC 2625 0.12140418157625639 RNA PCR Primer, Index 40 (95% over 21bp) CGTTTCTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTCTT 2566 0.11867547806654244 No Hit GAATATGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTCTTC 2562 0.11849048121842624 No Hit GAACTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTCTTCT 2525 0.11677926037335139 RNA PCR Primer, Index 40 (95% over 22bp) GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 2455 0.11354181553131788 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.249842405810011E-5 0.0 0.0 0.16080851022500703 0.0 2 9.249842405810011E-5 0.0 0.0 0.5601704560958543 0.0 3 9.249842405810011E-5 0.0 0.0 0.8554254256893098 0.0 4 9.249842405810011E-5 0.0 0.0 1.276894494910043 0.0 5 9.249842405810011E-5 0.0 0.0 2.4186487922712017 0.0 6 9.249842405810011E-5 0.0 0.0 3.2943776220412646 0.0 7 9.249842405810011E-5 0.0 0.0 4.302009204518178 0.0 8 9.249842405810011E-5 0.0 0.0 5.603462031015646 0.0 9 9.249842405810011E-5 0.0 0.0 6.23818621690233 0.0 10 0.002636205085655853 0.0 0.0 7.718438497104105 0.0 11 0.002636205085655853 0.0 0.0 9.241055055524491 0.0 12 0.002636205085655853 0.0 0.0 11.190459342548952 0.0 13 0.002636205085655853 0.0 0.0 11.766585776794829 0.0 14 0.002636205085655853 0.0 0.0 12.013556569029955 0.0 15 0.002728703509713953 0.0 0.0 12.395436312753821 0.0 16 0.002728703509713953 0.0 0.0 12.906675102522941 0.0 17 0.002728703509713953 0.0 0.0 13.561702692490377 0.0 18 0.002728703509713953 0.0 0.0 14.256227109530622 0.0 19 0.0027749527217430033 0.0 0.0 14.983865962383666 0.0 20 0.0028212019337720533 0.0 0.0 15.573497166542024 0.0 21 0.0028212019337720533 0.0 0.0 16.380407168812862 0.0 22 0.0028212019337720533 0.0 0.0 17.250632342351466 0.0 23 0.0028212019337720533 0.0 0.0 18.11128392900006 0.0 24 0.0028212019337720533 0.0 0.0 18.766727761875757 0.0 25 0.0028212019337720533 0.0 0.0 19.397705761588085 0.0 26 0.0028212019337720533 0.0 0.0 19.90635459548358 0.0 27 0.0028212019337720533 0.0 0.0 20.462963862253197 0.0 28 0.0028212019337720533 0.0 0.0 21.01134076928164 0.0 29 0.0028674511458011034 0.0 0.0 21.596717045933328 0.0 30 0.0028674511458011034 0.0 0.0 22.266405636113976 0.0 31 0.0029137003578301535 0.0 0.0 22.84220832587565 0.0 32 0.0029137003578301535 0.0 0.0 23.41912099672602 0.0 33 0.0029137003578301535 0.0 0.0 23.977348985916652 0.0 34 0.0029137003578301535 0.0 0.0 24.6074020013884 0.0 35 0.0029137003578301535 0.0 0.0 25.256694689064236 0.0 36 0.0029137003578301535 0.0 0.0 25.844383426317375 0.0 37 0.0029137003578301535 0.0 0.0 26.451404334198656 0.0 38 0.0029137003578301535 0.0 0.0 27.130296517573083 0.0 39 0.0029137003578301535 0.0 0.0 28.13769685398985 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTAT 2525 0.0 43.75248 1 CGTTATT 2060 0.0 43.36165 1 TAATACG 480 0.0 42.656246 4 CGTTTTT 5035 0.0 42.363453 1 AATACGG 490 0.0 41.785713 5 TACGAAT 245 0.0 41.32653 12 CTACGGG 865 0.0 40.578037 3 TTAGGGA 4055 0.0 40.2836 4 TACGGGA 1185 0.0 40.063293 4 CGTTAGG 440 0.0 39.886364 2 CTTGACC 1240 0.0 39.737904 7 TTATGGG 5615 0.0 39.710594 3 TCGTTAG 280 0.0 39.375 1 CCGATGA 1295 0.0 38.91892 18 TTACGGG 2105 0.0 38.907364 3 TTTACGG 1505 0.0 38.87043 2 TACGGCT 1830 0.0 38.729507 7 CGCTAAT 35 6.2508443E-6 38.571426 38 TAGGGCG 975 0.0 38.53846 5 TAGGGAT 2315 0.0 38.48812 5 >>END_MODULE