##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934128.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 839963 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.869628781267746 31.0 31.0 34.0 30.0 34.0 2 32.06339922115617 33.0 31.0 34.0 30.0 34.0 3 32.138401334344486 33.0 31.0 34.0 30.0 34.0 4 35.63790190758402 37.0 35.0 37.0 33.0 37.0 5 29.551612392450618 37.0 35.0 37.0 0.0 37.0 6 23.668665167394277 35.0 10.0 37.0 0.0 37.0 7 30.376716593469 35.0 19.0 37.0 17.0 37.0 8 34.26864516651329 35.0 32.0 37.0 32.0 37.0 9 36.903262405605965 38.0 37.0 39.0 34.0 39.0 10 36.8040235105594 38.0 37.0 39.0 33.0 39.0 11 36.983783809524944 39.0 37.0 39.0 33.0 39.0 12 37.09789240716555 39.0 37.0 39.0 34.0 39.0 13 37.109695308007616 39.0 37.0 39.0 33.0 39.0 14 38.2317494937277 40.0 38.0 41.0 34.0 41.0 15 38.08661691050677 40.0 37.0 41.0 33.0 41.0 16 38.282466013383925 40.0 38.0 41.0 34.0 41.0 17 38.28702573803846 40.0 37.0 41.0 34.0 41.0 18 38.367573333587316 40.0 38.0 41.0 34.0 41.0 19 38.37440458686871 40.0 38.0 41.0 34.0 41.0 20 38.3339397092491 40.0 38.0 41.0 34.0 41.0 21 38.234172219490624 40.0 37.0 41.0 34.0 41.0 22 38.293020049692664 40.0 37.0 41.0 34.0 41.0 23 38.2375402249861 40.0 37.0 41.0 34.0 41.0 24 38.21207362705262 40.0 37.0 41.0 34.0 41.0 25 37.95518969287933 40.0 37.0 41.0 33.0 41.0 26 37.87091931430313 40.0 37.0 41.0 33.0 41.0 27 37.05319043815025 40.0 37.0 41.0 32.0 41.0 28 37.4343929434987 40.0 37.0 41.0 32.0 41.0 29 37.70407029833457 40.0 37.0 41.0 32.0 41.0 30 37.69292337876787 40.0 36.0 41.0 33.0 41.0 31 37.73902540945256 40.0 37.0 41.0 33.0 41.0 32 37.7431351142848 40.0 37.0 41.0 33.0 41.0 33 36.62168571710897 40.0 36.0 41.0 31.0 41.0 34 37.132680844275285 40.0 36.0 41.0 31.0 41.0 35 37.42560327062025 40.0 36.0 41.0 32.0 41.0 36 37.545554982779 40.0 36.0 41.0 33.0 41.0 37 37.64023058158514 40.0 37.0 41.0 33.0 41.0 38 37.51868713264751 40.0 36.0 41.0 33.0 41.0 39 37.46375257005368 39.0 36.0 41.0 33.0 41.0 40 37.47549237287833 39.0 36.0 41.0 33.0 41.0 41 37.50389124282855 40.0 36.0 41.0 33.0 41.0 42 37.56690830429436 40.0 36.0 41.0 33.0 41.0 43 37.429584398360404 40.0 36.0 41.0 33.0 41.0 44 37.424653228773174 39.0 36.0 41.0 32.0 41.0 45 37.3511749922318 39.0 36.0 41.0 32.0 41.0 46 37.28916988010186 39.0 36.0 41.0 32.0 41.0 47 37.23612944855904 39.0 36.0 41.0 32.0 41.0 48 37.15681166908542 39.0 35.0 40.0 32.0 41.0 49 37.12221014497067 39.0 35.0 40.0 32.0 41.0 50 36.93501261365084 39.0 35.0 40.0 32.0 41.0 51 36.07430446341089 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 10.0 11 6.0 12 6.0 13 12.0 14 5.0 15 16.0 16 31.0 17 36.0 18 65.0 19 163.0 20 319.0 21 529.0 22 919.0 23 1428.0 24 2068.0 25 2985.0 26 3899.0 27 4943.0 28 6431.0 29 9031.0 30 12517.0 31 17932.0 32 25709.0 33 39427.0 34 55612.0 35 75007.0 36 102892.0 37 158723.0 38 177602.0 39 141565.0 40 74.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.42067448209028 4.391026747606739 57.964696063993294 14.223602706309682 2 19.984570748949658 5.523576633732676 53.362707643074756 21.129144974242912 3 19.476215023757 5.201062427749794 52.74494233674578 22.577780211747424 4 18.22306458736873 4.259354281081428 52.93137912027077 24.586202011279067 5 14.784698849830292 21.87667790128851 43.2954784913145 20.043144757566704 6 15.422465037150445 29.947152434095308 41.29169975344152 13.338682775312721 7 81.82360413494403 1.878654178815019 11.292045006744345 5.005696679496597 8 83.48510589156903 2.604162326197702 7.859512859495002 6.051218922738263 9 78.35190359575363 4.631870689542277 10.4464125205515 6.569813194152599 10 36.94388919511931 26.307706410877625 20.872109842933558 15.876294551069511 11 26.582837577369478 26.541169075304506 25.590174805318807 21.285818542007206 12 21.537734400205725 22.57254188577354 33.809822575518204 22.079901138502528 13 22.300982305172965 24.90478747278154 33.77541629809884 19.018813923946652 14 20.114933633981497 27.853012573172865 31.60627313345945 20.425780659386188 15 18.64665467407493 26.50735806220036 33.9336375530827 20.912349710642015 16 18.859164034606284 25.60827084050131 31.54317511604678 23.98939000884563 17 19.02988584020963 26.582242313054266 29.731071487672672 24.656800359063435 18 20.122433964353192 25.22087282416011 32.02522015850698 22.631473052979715 19 20.874967111646583 27.486805966453282 29.436653757367885 22.20157316453225 20 22.712428999848804 27.423231737588445 29.949057279903997 19.91528198265876 21 23.152567434517948 27.470852882805552 29.149498251708707 20.227081430967793 22 20.882705547744365 25.813160817797925 28.40589406914352 24.89823956531419 23 20.176960175626785 27.305131297450007 27.609311362524302 24.90859716439891 24 21.687383849050494 25.69934628072903 28.653881182861625 23.95938868735885 25 19.811705991811543 27.965755634474377 27.009046827062622 25.21349154665146 26 20.360896849027874 27.578119512407095 28.20695673499904 23.854026903565988 27 20.98330521701551 28.68745409023969 27.588000900039646 22.741239792705155 28 19.718130441459923 26.03150376861838 30.56848932631556 23.681876463606137 29 20.226009955200407 23.932601793174225 30.9337435101308 24.90764474149457 30 21.843462152499573 26.52878757754806 28.801863891623796 22.82588637832857 31 21.660001690550658 27.820868300151314 27.90372909282909 22.61540091646894 32 21.195100260368612 28.156716426794993 28.517446601814605 22.130736711021797 33 20.892110723924745 28.53197105110582 26.957854095954225 23.618064129015206 34 21.571188254720745 25.205991216279767 29.49296576158712 23.729854767412373 35 21.097357859810494 23.556275693096005 29.82548040806559 25.520886039027907 36 24.606202892270254 25.19730035727764 27.221794293320063 22.97470245713204 37 21.257245854876942 25.050031965693726 30.882907937611538 22.809814241817794 38 20.76198594461899 26.827372158059344 30.230617301000162 22.180024596321505 39 21.179028123857837 26.499738678965624 31.817115753908208 20.504117443268335 40 21.440944422551947 24.90145399261634 32.10415220670434 21.55344937812737 41 21.13069266146247 24.046059171653987 29.75166763297907 25.07158053390447 42 23.518893094100573 22.894817986030336 29.196286026884515 24.390002892984572 43 24.38345498551722 22.89446082744121 28.460063121827982 24.262021065213588 44 21.669168761004947 23.20411732421547 28.676620279702796 26.450093635076783 45 22.108592878495838 22.840172721893705 27.737293190295286 27.313941209315175 46 23.237809284456574 23.37210091396883 29.711784923859742 23.67830487771485 47 19.791347952231227 24.02212954618239 32.621555949488254 23.56496655209813 48 20.76960532785373 22.64837855953179 31.530674565427287 25.0513415471872 49 22.645878449407892 21.32498693394828 32.73346564074846 23.295668975895367 50 22.385509837933338 20.677458411858616 30.90136113138317 26.035670618824874 51 20.125886497381433 20.96747118623082 29.212120057669207 29.694522258718536 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 110.0 1 262.0 2 414.0 3 966.5 4 1519.0 5 1149.0 6 779.0 7 841.0 8 903.0 9 1089.0 10 1275.0 11 1449.5 12 1624.0 13 1640.5 14 1657.0 15 1740.0 16 1823.0 17 1900.5 18 1978.0 19 1998.0 20 2018.0 21 2036.0 22 2054.0 23 2515.0 24 2976.0 25 3739.0 26 5265.5 27 6029.0 28 7546.5 29 9064.0 30 10738.5 31 12413.0 32 14495.5 33 16578.0 34 19657.0 35 22736.0 36 25256.5 37 27777.0 38 30686.5 39 33596.0 40 38147.5 41 42699.0 42 49539.0 43 56379.0 44 66159.0 45 75939.0 46 90595.5 47 105252.0 48 111703.5 49 118155.0 50 107928.0 51 97701.0 52 79970.5 53 62240.0 54 51277.0 55 40314.0 56 34502.5 57 28691.0 58 24944.0 59 21197.0 60 18172.5 61 15148.0 62 12199.0 63 9250.0 64 7684.0 65 6118.0 66 4967.0 67 3816.0 68 3082.0 69 2348.0 70 1783.0 71 1218.0 72 997.5 73 777.0 74 616.0 75 384.0 76 313.0 77 179.0 78 45.0 79 45.5 80 46.0 81 35.5 82 25.0 83 17.5 84 10.0 85 6.0 86 2.0 87 1.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 839963.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.31943486493732 #Duplication Level Percentage of deduplicated Percentage of total 1 73.32353781698416 31.76334220529614 2 11.684333056357628 10.123174095502366 3 4.392753571161926 5.708748066110096 4 2.3687312849540625 4.104484024444272 5 1.5202612016497659 3.2928428051279184 6 1.1025487214527614 2.8657072514635695 7 0.8411932080123504 2.550801006832308 8 0.6582760526973112 2.2812917270375377 9 0.5307441427154734 2.0692382688278954 >10 3.4310305282912346 25.413148180271815 >50 0.09258352493316391 2.7518845973152386 >100 0.04743462365718183 3.5018948452629455 >500 0.0034290089389549423 0.9283920586396655 >1k 0.0031432581940420306 2.6450508678683162 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGCGTATTGTCGTATGCCGTCTTCTGC 3690 0.43930506462784674 TruSeq Adapter, Index 22 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGCGTATTGTCGTATGCCGTCTTCTGCT 3255 0.3875170692042388 TruSeq Adapter, Index 20 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCGCGTATTGTCGTATGCCGTCTTCTGC 2846 0.33882444821974306 TruSeq Adapter, Index 22 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGCGTATTGTCGTATGCCGTCTTCTGC 2255 0.2684642061614619 TruSeq Adapter, Index 22 (95% over 21bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCGCGTATTGTCGTATGC 1771 0.21084262044875787 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCGTATTGTCGTATGCCG 1582 0.18834162933367302 No Hit CCTGTATCTTATACACATCTGACGCGCGTATTGTCGTATGCCGTCTTCTGC 1376 0.163816739546861 TruSeq Adapter, Index 20 (95% over 21bp) GAATCTGTCTCTTATACACATCTGACGCGCGTATTGTCGTATGCCGTCTTC 1241 0.1477446030360861 No Hit TCTGTATCTTATACACATCTGACGCGCGTATTGTCGTATGCCGTCTTCTGC 1209 0.14393491141871725 TruSeq Adapter, Index 20 (95% over 21bp) CTGTCACTTATACACATCTGACGCGCGTATTGTCGTATGCCGTCTTCTGCT 1101 0.13107720221009736 TruSeq Adapter, Index 20 (95% over 22bp) TCCTGTCTCTTATACACATCTGACGCGCGTATTGTCGTATGCCGTCTTCTG 1042 0.12405308329057352 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1905286304277689E-4 0.0 0.0 0.4132324876214786 0.0 2 1.1905286304277689E-4 0.0 0.0 1.5622116688473182 0.0 3 1.1905286304277689E-4 0.0 0.0 2.194025213015335 0.0 4 1.1905286304277689E-4 0.0 0.0 2.8873890873764676 0.0 5 1.1905286304277689E-4 0.0 0.0 4.073393709008611 0.0 6 1.1905286304277689E-4 0.0 0.0 4.875214741601713 0.0 7 1.1905286304277689E-4 0.0 0.0 5.886568813150103 0.0 8 1.1905286304277689E-4 0.0 0.0 7.527950635920868 0.0 9 1.1905286304277689E-4 0.0 0.0 8.16464534747364 0.0 10 1.1905286304277689E-4 0.0 0.0 9.764001509590303 0.0 11 1.1905286304277689E-4 0.0 0.0 12.486740487378611 0.0 12 1.1905286304277689E-4 0.0 0.0 15.066139818063414 0.0 13 1.1905286304277689E-4 0.0 0.0 15.82903056444153 0.0 14 1.1905286304277689E-4 0.0 0.0 16.067731554842297 0.0 15 1.1905286304277689E-4 0.0 0.0 16.460367897157376 0.0 16 1.1905286304277689E-4 0.0 0.0 17.441363488629857 0.0 17 1.1905286304277689E-4 0.0 0.0 18.880593549953986 0.0 18 1.1905286304277689E-4 0.0 0.0 20.466377685683774 0.0 19 1.1905286304277689E-4 0.0 0.0 21.606070743592277 0.0 20 1.1905286304277689E-4 0.0 0.0 22.65325972691654 0.0 21 1.1905286304277689E-4 0.0 0.0 24.122253004001365 0.0 22 1.1905286304277689E-4 0.0 0.0 25.696369959152964 0.0 23 1.1905286304277689E-4 0.0 0.0 27.258700680863324 0.0 24 2.3810572608555378E-4 0.0 0.0 28.414465875282602 0.0 25 2.3810572608555378E-4 0.0 0.0 29.40903349314196 0.0 26 2.3810572608555378E-4 0.0 0.0 30.27978613343683 0.0 27 2.3810572608555378E-4 0.0 0.0 31.1282758883427 0.0 28 2.3810572608555378E-4 0.0 0.0 32.03164901311129 0.0 29 2.3810572608555378E-4 0.0 0.0 32.957880287584096 0.0 30 2.3810572608555378E-4 0.0 0.0 33.978639535312865 0.0 31 2.3810572608555378E-4 0.0 0.0 34.914633144555175 0.0 32 2.3810572608555378E-4 0.0 0.0 35.84395979346709 0.0 33 2.3810572608555378E-4 0.0 0.0 36.711378953596764 0.0 34 2.3810572608555378E-4 0.0 0.0 37.596656043182854 0.0 35 2.3810572608555378E-4 0.0 0.0 38.501814960897086 0.0 36 2.3810572608555378E-4 0.0 0.0 39.40661672002219 0.0 37 2.3810572608555378E-4 0.0 0.0 40.28153621052356 0.0 38 2.3810572608555378E-4 0.0 0.0 41.16169402699881 0.0 39 2.3810572608555378E-4 0.0 0.0 42.01875558804376 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGGG 20 7.0322E-4 45.000004 3 TCCGCAT 30 2.1648011E-6 45.000004 12 CTTCCCG 20 7.0322E-4 45.000004 1 ACGCAAT 30 2.1648011E-6 45.000004 18 GGCGTAG 45 3.8380676E-10 45.000004 1 GACCGAA 90 0.0 45.000004 17 TTCGTCG 30 2.1648011E-6 45.000004 1 CAATTCG 20 7.0322E-4 45.000004 16 CGTTATC 20 7.0322E-4 45.000004 21 ATCCGGC 45 3.8380676E-10 45.000004 6 ATCCGCA 20 7.0322E-4 45.000004 11 TACGACA 20 7.0322E-4 45.000004 45 ACTACGC 20 7.0322E-4 45.000004 15 TTGCGAG 45 3.8380676E-10 45.000004 1 GCGATAG 20 7.0322E-4 45.000004 9 CGCAATC 30 2.1648011E-6 45.000004 19 GCGTAAA 20 7.0322E-4 45.000004 38 GCCCGCG 35 1.2114106E-7 45.000004 14 CGGTACG 55 1.8189894E-12 45.0 3 TATACGA 25 3.8899052E-5 45.0 43 >>END_MODULE