##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934123.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 883546 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.729815991470733 31.0 31.0 34.0 30.0 34.0 2 31.824309090867935 33.0 31.0 34.0 30.0 34.0 3 31.928017330167304 33.0 31.0 34.0 30.0 34.0 4 35.53921470981703 37.0 35.0 37.0 33.0 37.0 5 29.38790962779527 35.0 35.0 37.0 0.0 37.0 6 23.584399680378837 35.0 10.0 37.0 0.0 37.0 7 30.29316639993843 35.0 19.0 37.0 17.0 37.0 8 33.77849936505852 35.0 32.0 37.0 30.0 37.0 9 36.62259350390359 37.0 35.0 39.0 33.0 39.0 10 36.846054421614724 38.0 37.0 39.0 33.0 39.0 11 37.03439096549585 39.0 37.0 39.0 34.0 39.0 12 37.034227985866046 39.0 37.0 39.0 34.0 39.0 13 36.92639772009607 39.0 37.0 39.0 33.0 39.0 14 37.990436264778516 40.0 37.0 41.0 33.0 41.0 15 37.7828171934455 40.0 37.0 41.0 33.0 41.0 16 38.074514513109676 40.0 37.0 41.0 33.0 41.0 17 38.0233219323046 40.0 37.0 41.0 33.0 41.0 18 38.07318238099658 40.0 37.0 41.0 33.0 41.0 19 38.11685299916473 40.0 37.0 41.0 34.0 41.0 20 37.98149841660762 40.0 37.0 41.0 33.0 41.0 21 37.953416120948994 40.0 37.0 41.0 33.0 41.0 22 38.04439949929036 40.0 37.0 41.0 34.0 41.0 23 37.94963476717681 40.0 36.0 41.0 34.0 41.0 24 37.9432729025993 40.0 36.0 41.0 34.0 41.0 25 37.75502690295695 39.0 36.0 41.0 33.0 41.0 26 37.658128722217064 39.0 36.0 41.0 33.0 41.0 27 36.767598970512005 39.0 36.0 41.0 32.0 41.0 28 37.17753008898235 39.0 36.0 41.0 32.0 41.0 29 37.523518866023956 39.0 36.0 41.0 32.0 41.0 30 37.52606315913376 39.0 36.0 41.0 33.0 41.0 31 37.61774372811376 39.0 36.0 41.0 33.0 41.0 32 37.56368429034821 40.0 36.0 41.0 33.0 41.0 33 36.40196209365443 39.0 35.0 41.0 31.0 41.0 34 36.87028519171611 40.0 35.0 41.0 31.0 41.0 35 37.20620544940501 40.0 35.0 41.0 31.0 41.0 36 37.326313513954 40.0 35.0 41.0 33.0 41.0 37 37.420690037643766 40.0 36.0 41.0 33.0 41.0 38 37.43147159287688 40.0 36.0 41.0 33.0 41.0 39 37.431136579193385 40.0 36.0 41.0 33.0 41.0 40 37.39666412388263 39.0 35.0 41.0 33.0 41.0 41 37.24953199946579 39.0 35.0 41.0 32.0 41.0 42 37.3577617916894 39.0 35.0 41.0 33.0 41.0 43 37.25849361549936 39.0 35.0 41.0 33.0 41.0 44 37.30711134451404 39.0 35.0 41.0 33.0 41.0 45 37.27571173430699 39.0 35.0 41.0 33.0 41.0 46 37.21186785973792 39.0 35.0 41.0 33.0 41.0 47 37.09238907764848 39.0 35.0 40.0 33.0 41.0 48 37.10078931940159 39.0 35.0 40.0 33.0 41.0 49 37.21615060223237 39.0 35.0 40.0 33.0 41.0 50 37.12769906716798 39.0 35.0 40.0 33.0 41.0 51 36.45924603812365 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 3.0 10 12.0 11 3.0 12 8.0 13 11.0 14 9.0 15 22.0 16 20.0 17 48.0 18 92.0 19 199.0 20 403.0 21 866.0 22 1540.0 23 2274.0 24 3032.0 25 3776.0 26 4548.0 27 5601.0 28 7249.0 29 9791.0 30 13874.0 31 20309.0 32 29537.0 33 47549.0 34 64380.0 35 82394.0 36 105048.0 37 155766.0 38 174741.0 39 150385.0 40 51.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.69648212996267 4.170467638357255 47.72937685191263 16.403673379767437 2 18.7316789391837 12.926095528699127 46.55467853399823 21.78754699811894 3 20.242862284476416 12.890783275573655 47.19833489144877 19.668019548501153 4 18.791551317079133 4.091128249123418 53.042399603416236 24.074920830381213 5 18.818375047818677 22.178698109662655 37.295737856319874 21.707188986198794 6 15.258515119756074 33.86139487927057 37.447965357774244 13.432124643199108 7 74.51609763385268 2.1008527003687414 17.369554046987933 6.013495618790646 8 72.747655470117 8.178408368098548 10.88047481398818 8.193461347796266 9 67.45704241771226 5.3948521073039775 12.785978319182023 14.362127155801735 10 38.74082390730081 25.409769270643523 19.845938977710272 16.003467844345398 11 30.17443347601596 22.30478096216835 26.76917783567579 20.751607726139895 12 25.717053781014233 18.439447408510706 31.94887419557103 23.894624614904032 13 24.53828097235458 21.38439877493645 34.92200745631806 19.155312796390906 14 20.073770918548668 26.954227623689086 29.330108449362 23.641893008400242 15 16.59732487046515 23.381125600704433 38.24045380772478 21.781095721105636 16 18.3637297888282 23.428095424573254 30.46711772788287 27.741057058715672 17 18.58103596190804 23.71874243106754 31.77819830546457 25.92202330155985 18 18.574697865193208 23.17208158941357 32.24472749579535 26.00849304959787 19 20.62620395542507 24.637313733523776 29.705187958521684 25.031294352529464 20 23.373882061601773 25.788017828160616 32.11547559493224 18.722624515305373 21 22.986352719609393 28.17102901263771 28.91700035991335 19.925617907839545 22 19.145352930124748 23.91601569131658 29.84485244684487 27.093778931713796 23 19.859294252930802 27.295918944797442 28.58391074148941 24.260876060782348 24 23.305860702215845 22.82099630353145 27.473498833111123 26.399644161141584 25 19.528581420774923 27.929162714787914 26.03316635466631 26.509089509770856 26 18.975016580913728 23.74805612837362 30.863022411962703 26.413904878749943 27 22.656205788945908 26.585373030945757 27.006743282183383 23.751677897924953 28 16.902572135463238 23.103381148236764 33.044346304550075 26.949700411749927 29 20.2575757232787 20.565199774544844 32.82024931356149 26.356975188614967 30 23.24598832432041 23.363695834738653 28.81649625486392 24.57381958607701 31 20.913342372666506 22.594635706573285 26.17034087642296 30.32168104433725 32 21.492599140282454 24.915284546588406 29.964597202635744 23.6275191104934 33 20.416028141149415 22.899769791272895 26.325397885339303 30.35880418223839 34 19.93591731500114 20.001222347223575 31.29695567633151 28.765904661443777 35 19.46599271571599 18.877681524221714 33.81793364465461 27.838392115407686 36 19.919279811124717 21.009771986970684 32.40487761814325 26.666070583761343 37 20.74391146584332 21.555074665042905 33.08599665439038 24.615017214723398 38 18.96856530390042 22.166361457128435 28.471862245995116 30.393210992976034 39 19.85703064696122 20.00778680453536 33.23562100897973 26.899561539523692 40 19.692466492972635 18.737451134406133 32.56864951004248 29.001432862578746 41 17.47832031382633 21.599554522345183 30.592634678896175 30.329490484932307 42 19.36752585603919 19.277547518748317 35.85540537787506 25.49952124733743 43 21.929814633307153 18.816111441849095 32.670172237778225 26.58390168706553 44 20.219886683885164 18.55489131295937 31.1601206954703 30.065101307685165 45 20.314505413413674 16.72318136237389 29.327731663093942 33.634581561118495 46 24.152222974242427 19.411552992147552 31.10941592175167 25.32680811185835 47 15.841280476624872 20.14360316271026 37.517005339846484 26.49811102081838 48 17.888598895813008 19.79025427085856 32.50696624737139 29.81418058595704 49 19.3041448888909 16.05258809388532 38.54479563033504 26.098471386888743 50 20.79665348493457 16.384093188130556 32.63938719659191 30.17986613034296 51 18.06957419308106 16.72578450923891 29.442949206945652 35.76169209073438 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 142.0 1 483.5 2 825.0 3 1552.0 4 2279.0 5 1684.0 6 1089.0 7 1117.0 8 1145.0 9 1178.0 10 1211.0 11 1288.5 12 1366.0 13 1463.5 14 1561.0 15 1506.5 16 1452.0 17 1448.5 18 1445.0 19 1484.5 20 1524.0 21 1763.0 22 2002.0 23 2403.5 24 2805.0 25 3458.0 26 4829.5 27 5548.0 28 6333.5 29 7119.0 30 8651.0 31 10183.0 32 11685.0 33 13187.0 34 14524.5 35 15862.0 36 17661.0 37 19460.0 38 21438.0 39 23416.0 40 27709.0 41 32002.0 42 38562.0 43 45122.0 44 56269.0 45 67416.0 46 102364.5 47 137313.0 48 129255.0 49 121197.0 50 112304.0 51 103411.0 52 86117.5 53 68824.0 54 58416.5 55 48009.0 56 42511.0 57 37013.0 58 34323.5 59 31634.0 60 28401.5 61 25169.0 62 21681.0 63 18193.0 64 15008.0 65 11823.0 66 9368.0 67 6913.0 68 5615.0 69 4317.0 70 3642.0 71 2967.0 72 2441.5 73 1916.0 74 1581.5 75 984.0 76 721.0 77 527.0 78 333.0 79 247.5 80 162.0 81 129.5 82 97.0 83 54.5 84 12.0 85 6.5 86 1.0 87 1.5 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 883546.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.61133526181797 #Duplication Level Percentage of deduplicated Percentage of total 1 70.68646654322391 25.8792592508725 2 12.123211022987542 8.876938864247283 3 4.989213954770035 5.479853543730793 4 2.6480999867134085 3.878019056815212 5 1.6642587867486027 3.0465368202039755 6 1.2325449132953938 2.7075069027543615 7 0.9403609224691661 2.409950829974174 8 0.7472518767622995 2.1886311188133787 9 0.619647661434802 2.0417515449291908 >10 4.185940137502716 26.47052752779188 >50 0.0999585091650529 2.527286347997987 >100 0.04997922172976824 3.4386002186056537 >500 0.0062065700187225025 1.5790149793483101 >1k 0.005879908438789739 5.544192714733693 >5k 3.266615799327632E-4 1.1227594202925044 >10k+ 6.533231598655264E-4 2.809170858889075 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGC 12894 1.4593467685892982 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCG 10595 1.199145262385886 No Hit GAATCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTC 9388 1.0625366421216327 No Hit CCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTCTGC 4720 0.5342110088212725 TruSeq Adapter, Index 19 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTCTGC 4456 0.5043314100227945 TruSeq Adapter, Index 19 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGCTCCTTT 4371 0.4947110846520724 No Hit CTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTCTGCT 4241 0.4799976458497916 TruSeq Adapter, Index 16 (95% over 23bp) GAATCAGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTC 3564 0.4033745837794523 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTC 3090 0.34972712230036695 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCT 2878 0.32573289902280134 No Hit TCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTCTGC 2762 0.31260398439922765 TruSeq Adapter, Index 19 (95% over 21bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTA 2402 0.2718590769467577 No Hit GAACTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTCT 2355 0.2665396029182408 No Hit GCTGTATCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTCTGC 1945 0.22013568054181673 TruSeq Adapter, Index 16 (95% over 22bp) GAATATGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTC 1938 0.21934341845246313 No Hit CCTGTATCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTCTGC 1635 0.18504978801330094 TruSeq Adapter, Index 16 (95% over 22bp) CTGTCACTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTCTGCT 1466 0.1659223175703359 TruSeq Adapter, Index 16 (95% over 23bp) GAATAATACGGCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGC 1287 0.14566304414258002 No Hit TCTGTATCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTCTGC 1137 0.12868599937071754 TruSeq Adapter, Index 16 (95% over 22bp) GAATAATACCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCG 1090 0.12336652534220063 No Hit TCCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTCTG 1021 0.1155570847471439 TruSeq Adapter, Index 16 (95% over 21bp) GAACTATCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTCT 989 0.11193531519581323 No Hit GCTGACTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTCTGC 956 0.1082003653460035 TruSeq Adapter, Index 19 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTCTG 891 0.10084364594486307 TruSeq Adapter, Index 16 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.263605969581663E-4 0.0 0.0 0.5087454416634788 0.0 2 2.263605969581663E-4 0.0 0.0 1.9711480783117121 0.0 3 2.263605969581663E-4 0.0 0.0 2.6260092853116874 0.0 4 2.263605969581663E-4 0.0 0.0 3.5504659632888385 0.0 5 2.263605969581663E-4 0.0 0.0 5.728620807518793 0.0 6 2.263605969581663E-4 0.0 0.0 6.561288263429408 0.0 7 2.263605969581663E-4 0.0 0.0 7.950576427260154 0.0 8 2.263605969581663E-4 0.0 0.0 9.938927910940686 0.0 9 2.263605969581663E-4 0.0 0.0 10.597863608685909 0.0 10 2.263605969581663E-4 0.0 0.0 13.447403983493786 0.0 11 2.263605969581663E-4 0.0 0.0 16.157845771470868 0.0 12 2.263605969581663E-4 0.0 0.0 20.479748649193137 0.0 13 2.263605969581663E-4 0.0 0.0 21.42016374925584 0.0 14 2.263605969581663E-4 0.0 0.0 21.79150830856571 0.0 15 2.263605969581663E-4 0.0 0.0 22.55581486419496 0.0 16 2.263605969581663E-4 0.0 0.0 23.642458909892635 0.0 17 2.263605969581663E-4 0.0 0.0 24.96191482956179 0.0 18 3.3954089543724946E-4 0.0 0.0 26.38877885248759 0.0 19 3.3954089543724946E-4 0.0 0.0 27.97273712970236 0.0 20 3.3954089543724946E-4 0.0 0.0 29.06277658435441 0.0 21 3.3954089543724946E-4 0.0 0.0 30.401359974466526 0.0 22 3.3954089543724946E-4 0.0 0.0 31.768917520989287 0.0 23 3.3954089543724946E-4 0.0 0.0 32.965120095614715 0.0 24 3.3954089543724946E-4 0.0 0.0 33.91357099686943 0.0 25 4.527211939163326E-4 0.0 0.0 34.759820088597536 0.0 26 4.527211939163326E-4 0.0 0.0 35.48417399886367 0.0 27 4.527211939163326E-4 0.0 0.0 36.22618403569254 0.0 28 4.527211939163326E-4 0.0 0.0 36.99139603370962 0.0 29 4.527211939163326E-4 0.0 0.0 37.81229273857841 0.0 30 4.527211939163326E-4 0.0 0.0 38.658994551500435 0.0 31 4.527211939163326E-4 0.0 0.0 39.4648382766715 0.0 32 4.527211939163326E-4 0.0 0.0 40.254836760055504 0.0 33 4.527211939163326E-4 0.0 0.0 40.968099001070684 0.0 34 4.527211939163326E-4 0.0 0.0 41.700035991334914 0.0 35 4.527211939163326E-4 0.0 0.0 42.42880393324173 0.0 36 4.527211939163326E-4 0.0 0.0 43.16979534738429 0.0 37 4.527211939163326E-4 0.0 0.0 43.92765062600023 0.0 38 4.527211939163326E-4 0.0 0.0 44.66230394342796 0.0 39 4.527211939163326E-4 0.0 0.0 45.42932682622071 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGCGACA 30 2.1649303E-6 45.000004 30 CATACGC 30 2.1649303E-6 45.000004 32 CGTCAGG 30 2.1649303E-6 45.000004 2 AACGTAC 20 7.0324005E-4 45.0 37 AAGTACG 20 7.0324005E-4 45.0 10 CGCGCAT 25 3.8900707E-5 45.0 36 CGCGAAC 20 7.0324005E-4 45.0 11 CCCGTAA 20 7.0324005E-4 45.0 36 GGACGAT 20 7.0324005E-4 45.0 8 CGATCGA 25 3.8900707E-5 45.0 41 GGTTACG 20 7.0324005E-4 45.0 1 TCGAATA 20 7.0324005E-4 45.0 44 CCGTTAG 25 3.8900707E-5 45.0 1 CGAAGTT 20 7.0324005E-4 45.0 23 CGTTCGG 65 0.0 44.999996 2 AATACGG 345 0.0 44.347824 5 TCGTTTG 200 0.0 42.75 1 AGGGATT 550 0.0 42.545452 6 TAATACG 360 0.0 42.500004 4 TCGTTAG 165 0.0 42.272728 1 >>END_MODULE