##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934120.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 389009 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.96194432519556 33.0 31.0 34.0 30.0 34.0 2 32.1915688325977 33.0 31.0 34.0 30.0 34.0 3 32.25997341963811 34.0 31.0 34.0 30.0 34.0 4 35.690122850628136 37.0 35.0 37.0 33.0 37.0 5 29.45955234968857 37.0 35.0 37.0 0.0 37.0 6 23.678539571063908 35.0 10.0 37.0 0.0 37.0 7 30.40744558609184 35.0 19.0 37.0 17.0 37.0 8 34.290887871488835 35.0 32.0 37.0 32.0 37.0 9 36.91687595916804 38.0 37.0 39.0 34.0 39.0 10 36.984766419285926 39.0 37.0 39.0 34.0 39.0 11 37.177427771593976 39.0 37.0 39.0 34.0 39.0 12 37.166903593490126 39.0 37.0 39.0 34.0 39.0 13 37.07070016374942 39.0 37.0 39.0 33.0 39.0 14 38.19973316812722 40.0 37.0 41.0 33.0 41.0 15 38.076748866992794 40.0 37.0 41.0 33.0 41.0 16 38.272862581585514 40.0 37.0 41.0 34.0 41.0 17 38.27226362372079 40.0 37.0 41.0 34.0 41.0 18 38.36337976756322 40.0 37.0 41.0 34.0 41.0 19 38.383047692983965 40.0 37.0 41.0 34.0 41.0 20 38.34304604777782 40.0 37.0 41.0 34.0 41.0 21 38.229264618556385 40.0 37.0 41.0 34.0 41.0 22 38.29305234583261 40.0 37.0 41.0 34.0 41.0 23 38.24621795382626 40.0 37.0 41.0 34.0 41.0 24 38.213681431535 40.0 37.0 41.0 34.0 41.0 25 37.98143487682804 40.0 37.0 41.0 34.0 41.0 26 37.90141359197345 40.0 37.0 41.0 34.0 41.0 27 37.05254377148086 40.0 36.0 41.0 33.0 41.0 28 37.41634512312054 40.0 36.0 41.0 33.0 41.0 29 37.72038693192189 40.0 36.0 41.0 33.0 41.0 30 37.712986074872305 40.0 36.0 41.0 33.0 41.0 31 37.771282926616095 40.0 36.0 41.0 33.0 41.0 32 37.754483829422966 40.0 36.0 41.0 33.0 41.0 33 36.50490348552347 40.0 35.0 41.0 31.0 41.0 34 37.01460120459938 40.0 35.0 41.0 31.0 41.0 35 37.354798989226474 40.0 35.0 41.0 32.0 41.0 36 37.4649995244326 40.0 35.0 41.0 33.0 41.0 37 37.60359271893452 40.0 36.0 41.0 33.0 41.0 38 37.537136672930444 40.0 36.0 41.0 33.0 41.0 39 37.54395656655758 40.0 36.0 41.0 33.0 41.0 40 37.5003894511438 40.0 36.0 41.0 33.0 41.0 41 37.42767648049274 40.0 35.0 41.0 33.0 41.0 42 37.468945448562884 40.0 35.0 41.0 33.0 41.0 43 37.34006154099262 39.0 35.0 41.0 33.0 41.0 44 37.37265461724536 39.0 35.0 41.0 33.0 41.0 45 37.30948641291076 39.0 35.0 41.0 33.0 41.0 46 37.24886570747721 39.0 35.0 41.0 33.0 41.0 47 37.206722723638784 39.0 35.0 41.0 33.0 41.0 48 37.16374942482051 39.0 35.0 41.0 33.0 41.0 49 37.194003223575805 39.0 35.0 41.0 33.0 41.0 50 37.109807228110405 39.0 35.0 41.0 33.0 41.0 51 36.35075281034629 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 4.0 11 4.0 12 4.0 13 5.0 14 8.0 15 13.0 16 12.0 17 30.0 18 49.0 19 71.0 20 162.0 21 237.0 22 403.0 23 668.0 24 959.0 25 1454.0 26 1972.0 27 2451.0 28 3114.0 29 4112.0 30 5725.0 31 8111.0 32 11834.0 33 19512.0 34 26938.0 35 35128.0 36 44324.0 37 67348.0 38 81122.0 39 73186.0 40 47.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.303316889840595 5.0096527329701885 53.02910729571809 18.65792308147112 2 19.059456207954057 4.328434560639985 54.6128752805205 21.999233950885454 3 20.616232529324513 4.46827708356362 53.006742774588766 21.9087476125231 4 19.44119544792023 4.641794919911878 51.42117534555756 24.495834286610336 5 15.107619618055109 22.55166332912606 41.313954175867394 21.026762876951434 6 16.2885691590683 29.235313321799755 40.12066558871389 14.355451930418061 7 82.68523350359503 2.1793840245341367 9.802600968100995 5.332781503769836 8 83.18367955497173 2.476035258824346 8.09929847381423 6.240986712389688 9 77.52082856694832 5.127130734764491 10.926225357253944 6.425815341033241 10 37.485765110832915 29.38183949471606 17.863082859265468 15.269312535185561 11 27.664141446598922 25.433087666352193 25.913025148518415 20.98974573853047 12 25.906598561987 21.039616050014267 30.41317810127786 22.640607286720872 13 22.405908346593524 24.900966301550863 31.60723787881514 21.08588747304047 14 19.53322416705012 26.380880648005572 30.68129529136858 23.40459989357573 15 18.350475181808132 24.453418815502985 34.417712700734434 22.778393301954452 16 20.08076933952685 24.708168705608355 32.388967864496706 22.82209409036809 17 19.412404340259478 24.219234002298148 29.050741756617455 27.31761990082492 18 20.933191777054002 22.798958378854987 32.09077424943896 24.17707559465205 19 22.353210337035904 24.405090884786727 30.089278140094443 23.152420638082923 20 24.075278463994408 25.03772406293942 30.285160497572033 20.60183697549414 21 23.82181389119532 26.20607749435103 28.814500435722568 21.15760817873108 22 22.036251089306415 24.948265978422093 28.023259101974507 24.992223830296986 23 21.2198175363552 25.593495266176365 27.407592112264755 25.779095085203686 24 22.55166332912606 23.202805076489234 29.49391916382397 24.751612430560733 25 20.103647987578693 25.233863483878267 27.61555645242141 27.04693207612163 26 18.964856854211597 25.867524915875983 28.45975285918835 26.707865370724072 27 19.560215830482072 26.819687976370727 29.44173528118887 24.178360911958336 28 17.816554372778008 24.014097360215317 33.01620270996301 25.153145557043665 29 20.574074121678418 22.07686711618497 31.72908595945081 25.619972802685798 30 20.86918297520109 23.508453531923426 32.1154523417196 23.506911151155883 31 22.59973419638106 25.33643180491968 27.865165073301647 24.198668925397612 32 23.76860175471519 24.781431792066506 27.305023791223338 24.144942661994968 33 21.820317781850807 27.729178502296865 27.463889010279967 22.986614705572364 34 20.20544511823634 23.802277068139812 29.423740838900898 26.56853697472295 35 20.746306640720395 22.70127426357745 28.40114239002183 28.151276705680335 36 21.152723972967205 24.5464757884779 30.590037762622458 23.710762475932434 37 20.728569261893686 24.89274027079065 32.19180018971283 22.186890277602835 38 21.772246914595804 25.52717289317214 29.170019202640557 23.5305609895915 39 22.08869203540278 23.256274276430624 30.737078062461283 23.917955625705318 40 22.460919927302452 21.87095928371837 29.724762152032476 25.9433586369467 41 20.046836962640967 23.31205704752332 27.73920397728587 28.90190201254984 42 21.58304820711089 23.475806472343827 28.032513386579744 26.908631933965538 43 21.338580855455785 23.411797670490913 30.20572788804372 25.04389358600958 44 20.12781195293682 22.459634609996172 29.81550555385608 27.59704788321093 45 21.116220961468755 21.794097308802623 28.726841795434037 28.36283993429458 46 22.03830759699647 22.112341873838396 30.748902981679088 25.10044754748605 47 18.845579408188502 22.49510936764959 32.55477379700727 26.10453742715464 48 19.676151451508833 22.319020896688766 32.08306234560126 25.921765306201145 49 21.626491932063267 21.019050973113732 32.83008876401317 24.524368330809825 50 21.13087357876039 20.301586852746336 31.48693217894702 27.08060738954626 51 20.15120472791118 20.215470593225348 29.148939998817507 30.484384680045963 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 61.0 1 229.0 2 397.0 3 711.0 4 1025.0 5 759.0 6 493.0 7 531.0 8 569.0 9 566.0 10 563.0 11 602.0 12 641.0 13 656.0 14 671.0 15 697.0 16 723.0 17 665.0 18 607.0 19 666.5 20 726.0 21 960.0 22 1194.0 23 1341.0 24 1488.0 25 2018.0 26 2987.0 27 3426.0 28 3933.5 29 4441.0 30 5136.0 31 5831.0 32 6597.0 33 7363.0 34 8667.5 35 9972.0 36 10712.0 37 11452.0 38 12561.5 39 13671.0 40 15828.5 41 17986.0 42 20842.0 43 23698.0 44 26382.0 45 29066.0 46 34126.5 47 39187.0 48 43232.5 49 47278.0 50 45035.0 51 42792.0 52 35868.0 53 28944.0 54 25525.0 55 22106.0 56 19584.0 57 17062.0 58 15616.0 59 14170.0 60 13002.5 61 11835.0 62 10516.5 63 9198.0 64 7811.5 65 6425.0 66 5293.5 67 4162.0 68 3591.5 69 3021.0 70 2496.5 71 1972.0 72 1566.5 73 1161.0 74 882.0 75 445.0 76 287.0 77 204.5 78 122.0 79 89.5 80 57.0 81 35.5 82 14.0 83 7.5 84 1.0 85 0.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 389009.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.41987913789423 #Duplication Level Percentage of deduplicated Percentage of total 1 73.78669410480775 34.25169422329948 2 10.369179121902581 9.62672083195788 3 4.147777636169481 5.7761800968554375 4 2.4815786768095047 4.607783289946908 5 1.7979982171055509 4.173142996409449 6 1.3589641829165038 3.784977187422678 7 1.0604177740780172 3.445712543586346 8 0.8360791167892595 3.1048553240859817 9 0.6562671006810896 2.74174555462132 >10 3.439896560549532 23.7249504130974 >50 0.039874767944324346 1.2748312018572658 >100 0.02190304154688235 1.9039043491132113 >500 0.0016848493497601809 0.5339170350518768 >1k 0.0016848493497601809 1.0495849526947538 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTGC 1728 0.44420566105154385 No Hit CTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTGCT 1293 0.33238305540488783 Illumina Single End Adapter 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTGC 1005 0.25834877856296384 No Hit GCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTGC 927 0.23829782858494275 No Hit CCTGTATCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTGC 600 0.15423807675400825 No Hit CTGTCACTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTGCT 521 0.1339300633147305 Illumina Single End Adapter 2 (95% over 21bp) TCTGTATCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTGC 403 0.10359657488644221 No Hit TCCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTG 393 0.10102594027387542 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3598888457593526 0.0 2 0.0 0.0 0.0 1.3842867388672242 0.0 3 0.0 0.0 0.0 1.912809215210959 0.0 4 0.0 0.0 0.0 2.4557272453850683 0.0 5 0.0 0.0 0.0 3.407633242418556 0.0 6 0.0 0.0 0.0 4.067258084003198 0.0 7 0.0 0.0 0.0 4.944615677272248 0.0 8 0.0 0.0 0.0 6.35923590456776 0.0 9 0.0 0.0 0.0 6.9450835327717355 0.0 10 0.0 0.0 0.0 8.120120614176022 0.0 11 0.0 0.0 0.0 10.303617654090266 0.0 12 0.0 0.0 0.0 12.307941461508603 0.0 13 0.0 0.0 0.0 12.964995668480677 0.0 14 0.0 0.0 0.0 13.186070245161423 0.0 15 0.0 0.0 0.0 13.528221712094064 0.0 16 0.0 0.0 0.0 14.319720109303384 0.0 17 0.0 0.0 0.0 15.41275394656679 0.0 18 0.0 0.0 0.0 16.648972131750167 0.0 19 0.0 0.0 0.0 17.421961959749 0.0 20 0.0 0.0 0.0 18.25613289152693 0.0 21 2.5706346125668045E-4 0.0 0.0 19.42320100563226 0.0 22 2.5706346125668045E-4 0.0 0.0 20.540141744792535 0.0 23 2.5706346125668045E-4 0.0 0.0 21.620579472454367 0.0 24 2.5706346125668045E-4 0.0 0.0 22.470945402291463 0.0 25 2.5706346125668045E-4 0.0 0.0 23.251390070666744 0.0 26 2.5706346125668045E-4 0.0 0.0 23.951373875668686 0.0 27 2.5706346125668045E-4 0.0 0.0 24.611769907637097 0.0 28 2.5706346125668045E-4 0.0 0.0 25.297101095347408 0.0 29 2.5706346125668045E-4 0.0 0.0 26.03024608685146 0.0 30 2.5706346125668045E-4 0.0 0.0 26.839738926348748 0.0 31 2.5706346125668045E-4 0.0 0.0 27.558488364022427 0.0 32 2.5706346125668045E-4 0.0 0.0 28.266441136323323 0.0 33 2.5706346125668045E-4 0.0 0.0 28.95897010094882 0.0 34 2.5706346125668045E-4 0.0 0.0 29.65381263672563 0.0 35 2.5706346125668045E-4 0.0 0.0 30.41497754550666 0.0 36 2.5706346125668045E-4 0.0 0.0 31.14735134662694 0.0 37 2.5706346125668045E-4 0.0 0.0 31.822399995886986 0.0 38 2.5706346125668045E-4 0.0 0.0 32.540121179715634 0.0 39 2.5706346125668045E-4 0.0 0.0 33.28174926544116 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGGTACG 30 2.1617852E-6 45.000004 7 TACGAAT 50 2.1827873E-11 45.000004 12 CGCAGTA 25 3.8860308E-5 45.000004 37 CCAACCG 25 3.8860308E-5 45.000004 32 CGTCATA 25 3.8860308E-5 45.000004 38 TCGTTAG 40 6.7957444E-9 45.0 1 CTGTACG 20 7.027526E-4 45.0 1 GTCTACG 20 7.027526E-4 45.0 1 ACGGGTA 35 1.209155E-7 45.0 5 CATTAGT 20 7.027526E-4 45.0 38 CGTTAGG 70 0.0 45.0 2 TGTAGCG 20 7.027526E-4 45.0 2 ATTGCGG 20 7.027526E-4 45.0 2 CGTTTGG 145 0.0 43.44828 2 CGTTATT 90 0.0 42.5 1 TTTCACG 85 0.0 42.35294 1 TAGGGAC 355 0.0 41.830986 5 TTATGGG 1160 0.0 41.31466 3 CGTGGGT 60 3.6379788E-12 41.250004 4 GGATGAC 115 0.0 41.086956 8 >>END_MODULE