SRR2934119.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934119.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	411230
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTGC	2789	0.6782092746151789	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGC	1953	0.4749167132748098	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCG	1736	0.42214818957760863	No Hit
GCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTGC	1485	0.36111178659144516	No Hit
TCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTGC	1459	0.3547892906645916	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTC	1306	0.31758383386426087	No Hit
CTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTGCT	1278	0.3107749920968801	No Hit
CCTGTATCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTGC	970	0.23587773265569145	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCGAATCAT	692	0.1682756608224108	No Hit
CGCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTG	578	0.14055394791236048	No Hit
TCCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTG	574	0.1395812562313061	No Hit
TCTGTATCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTGC	538	0.1308270311018165	No Hit
GCTGTATCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTGC	531	0.1291248206599713	No Hit
CCTGACTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTGC	501	0.12182963305206332	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCT	495	0.12037059553048172	No Hit
GAATCAGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTC	441	0.10723925783624735	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTC	430	0.10456435571334775	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCGATA	35	1.2093915E-7	45.000004	14
TACGGGT	35	1.2093915E-7	45.000004	4
TACGGCA	35	1.2093915E-7	45.000004	13
CGTTATT	35	1.2093915E-7	45.000004	1
CGGGCTT	35	1.2093915E-7	45.000004	6
TCATCGA	35	1.2093915E-7	45.000004	16
ACGAACG	35	1.2093915E-7	45.000004	21
CAGCGTT	25	3.8864207E-5	45.0	15
ACACGTG	25	3.8864207E-5	45.0	42
GATAACG	40	6.7975634E-9	45.0	17
TACCACG	20	7.027997E-4	45.0	21
CATTGTG	20	7.027997E-4	45.0	11
TTTCGAG	110	0.0	45.0	1
CGCATGG	25	3.8864207E-5	45.0	2
CCAGCGT	25	3.8864207E-5	45.0	14
ATTAACG	20	7.027997E-4	45.0	24
ACGGGTA	20	7.027997E-4	45.0	5
CGTTATG	20	7.027997E-4	45.0	1
ATACTAC	40	6.7975634E-9	45.0	3
GCCGAAT	20	7.027997E-4	45.0	30