##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934116.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1007232 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.838509896429024 31.0 31.0 34.0 30.0 34.0 2 32.00712546861101 33.0 31.0 34.0 30.0 34.0 3 32.090464758863895 33.0 31.0 34.0 30.0 34.0 4 35.61020301181853 37.0 35.0 37.0 33.0 37.0 5 29.386911853475663 37.0 35.0 37.0 0.0 37.0 6 23.55617077296988 35.0 10.0 37.0 0.0 37.0 7 30.297912496822978 35.0 19.0 37.0 17.0 37.0 8 34.04604897382132 35.0 32.0 37.0 32.0 37.0 9 36.75046265408565 37.0 35.0 39.0 34.0 39.0 10 36.89251532913966 39.0 37.0 39.0 33.0 39.0 11 37.08125833968738 39.0 37.0 39.0 34.0 39.0 12 36.89933103793366 39.0 35.0 39.0 33.0 39.0 13 36.70060323738721 39.0 35.0 39.0 33.0 39.0 14 37.36640416507815 40.0 36.0 41.0 32.0 41.0 15 37.321882148303466 40.0 36.0 41.0 31.0 41.0 16 37.73531917174991 40.0 36.0 41.0 33.0 41.0 17 37.79447039013852 40.0 36.0 41.0 33.0 41.0 18 37.9102222725251 40.0 36.0 41.0 33.0 41.0 19 37.91939295018427 40.0 36.0 41.0 33.0 41.0 20 37.789955045113736 40.0 36.0 41.0 33.0 41.0 21 37.70534494535519 40.0 36.0 41.0 33.0 41.0 22 37.873686499237515 40.0 36.0 41.0 33.0 41.0 23 37.836441852522555 39.0 36.0 41.0 34.0 41.0 24 37.813591109098994 39.0 36.0 41.0 34.0 41.0 25 37.58590672258229 39.0 35.0 41.0 33.0 41.0 26 37.47627954632101 39.0 35.0 41.0 33.0 41.0 27 36.57686213305376 39.0 35.0 41.0 32.0 41.0 28 36.981858201486844 39.0 35.0 41.0 32.0 41.0 29 37.259948055661454 39.0 35.0 41.0 32.0 41.0 30 37.229769308361924 39.0 35.0 41.0 32.0 41.0 31 37.24310982971153 39.0 35.0 41.0 32.0 41.0 32 37.25626171527513 39.0 35.0 41.0 32.0 41.0 33 36.07737542095565 39.0 35.0 40.0 30.0 41.0 34 36.4820527941924 39.0 35.0 41.0 30.0 41.0 35 36.787094730906084 39.0 35.0 41.0 30.0 41.0 36 36.89578865643665 39.0 35.0 40.0 31.0 41.0 37 36.93659951232685 39.0 35.0 40.0 32.0 41.0 38 36.97471188365739 39.0 35.0 40.0 32.0 41.0 39 37.05220942146397 39.0 35.0 40.0 32.0 41.0 40 36.93527111926547 39.0 35.0 40.0 32.0 41.0 41 36.77173183536663 39.0 35.0 40.0 31.0 41.0 42 36.88462241072563 39.0 35.0 40.0 32.0 41.0 43 36.78175633816241 39.0 35.0 40.0 32.0 41.0 44 36.80813159232431 39.0 35.0 40.0 32.0 41.0 45 36.768899320116915 39.0 35.0 40.0 32.0 41.0 46 36.716083285677975 39.0 35.0 40.0 32.0 41.0 47 36.614497950819676 38.0 35.0 40.0 32.0 41.0 48 36.58867966863642 38.0 35.0 40.0 32.0 41.0 49 36.641683346041425 38.0 35.0 40.0 32.0 41.0 50 36.52780392203584 38.0 35.0 40.0 32.0 41.0 51 35.72828305693226 37.0 34.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 5.0 10 5.0 11 8.0 12 16.0 13 20.0 14 9.0 15 31.0 16 42.0 17 91.0 18 168.0 19 345.0 20 641.0 21 1138.0 22 1755.0 23 2506.0 24 3636.0 25 4903.0 26 6133.0 27 7920.0 28 10068.0 29 13617.0 30 18905.0 31 27127.0 32 39915.0 33 64427.0 34 83359.0 35 90446.0 36 117042.0 37 171997.0 38 189564.0 39 151319.0 40 70.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.32796416317194 4.35748665650019 51.730385849536155 16.584163330791714 2 20.034411138645318 7.935907516838226 49.62084207014868 22.40883927436777 3 21.35208174482145 8.188480906087177 48.997748284407166 21.461689064684204 4 20.326399478968103 4.76613133816241 50.71284470707841 24.19462447579108 5 17.381199167619773 22.428199262930487 39.12355842546702 21.067043143982715 6 16.75810538187826 31.555788537298255 37.25894332189605 14.427162758927437 7 79.61353491549117 2.2855707523192272 13.039597629940273 5.061296702249333 8 79.6051952281103 4.965191733384166 8.80919192400559 6.620421114499936 9 73.94681662218834 5.284681185665269 11.363519030372347 9.40498316177405 10 40.7449326470962 25.819374285169655 18.493653895031134 14.942039172703012 11 34.129872760198246 21.215767568941416 25.16451026178676 19.489849409073578 12 29.95764630194434 18.78008244376668 30.152338289490405 21.109932964798578 13 28.411329266742914 20.345759467530815 32.9554660693862 18.28744519634007 14 21.413338734273733 23.095473535392046 34.662520650654464 20.828667079679754 15 17.69046257466006 20.903128574151737 39.52416126572626 21.88224758546194 16 23.81913997966705 22.684446085906725 29.277465370440968 24.21894856398526 17 24.63881211081459 22.553790983606557 28.661619170161394 24.14577773541746 18 25.669160630321514 20.686793112212477 30.200887183886138 23.44315907357987 19 25.070887342737326 23.861731954505018 28.11497251874444 22.95240818401322 20 24.000031770237644 28.269753145253528 29.184636707332572 18.545578377176263 21 22.898795907993392 26.195255909264205 31.678798926165967 19.22714925657644 22 20.551273192273477 21.552829933917906 33.61410280848901 24.28179406531961 23 20.485151385182363 24.69689207650273 31.314930423179565 23.50302611513534 24 22.854119011310203 25.214349822086668 27.70890916889058 24.222621997712544 25 23.566963718388614 26.144224965052736 24.919482303977635 25.369329012581016 26 21.682889344262296 23.441173433727283 27.253204822722072 27.622732399288346 27 21.390206029991106 26.050899891981196 29.31161837590545 23.247275702122252 28 19.29734162536536 24.13604810013979 29.033231668572878 27.53337860592197 29 22.996985798703776 24.329647985766933 26.930637628669462 25.74272858685983 30 24.96574771254289 24.717741294954887 29.317178167492692 20.99933282500953 31 25.747791968483924 24.825263692972424 26.79809616850934 22.628848170034313 32 26.691765154403356 24.533871044605412 25.94576026178676 22.828603539204472 33 26.14521778497903 25.006056201550386 25.268954918032787 23.579771095437792 34 23.077304930740883 23.567559410344387 29.695343277417713 23.659792381497013 35 21.71922655356462 25.663600838734276 28.05828250095311 24.558890106748 36 28.709473090608718 25.520833333333332 25.18436666031262 20.58532691574533 37 22.374289140932774 28.197575136612024 27.177452662345914 22.25068306010929 38 24.526524177150847 24.279411297496505 26.758184807472357 24.43587971788029 39 22.5962836764519 22.25634213368916 28.141679374761726 27.005694815097215 40 23.520896873808617 21.845215402211206 31.47844786504003 23.155439858940145 41 22.25346295590291 24.48581856017283 26.76940367263947 26.491314811284788 42 22.99102887914602 21.26739420510865 31.537222804676578 24.204354111068753 43 25.10881306392172 20.430645571228872 29.108288855000637 25.35225250984877 44 23.657906023637057 20.997545749142205 28.456800419367134 26.8877478078536 45 22.70013264074215 20.06677706824247 26.53797734782056 30.695112943194815 46 23.73792730969628 21.472610083873427 29.429565383149065 25.35989722328123 47 18.638903450247806 23.595457650273225 34.556288918541114 23.20934998093786 48 21.155006989452282 25.334977443131272 29.08604968865167 24.423965878764772 49 24.078464544414793 20.327392298894395 32.32383403227856 23.27030912441225 50 22.54197642648367 21.28655562968611 28.71999698182742 27.451470962002794 51 20.39827964163172 21.741664283898842 26.720060522302706 31.13999555216673 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 179.0 1 554.5 2 930.0 3 1766.0 4 2602.0 5 1873.0 6 1144.0 7 1229.0 8 1314.0 9 1343.5 10 1373.0 11 1408.5 12 1444.0 13 1401.5 14 1359.0 15 1320.0 16 1281.0 17 1348.0 18 1415.0 19 1522.0 20 1629.0 21 1873.5 22 2118.0 23 2605.0 24 3092.0 25 3763.5 26 5305.0 27 6175.0 28 7376.5 29 8578.0 30 9593.0 31 10608.0 32 12577.0 33 14546.0 34 17410.5 35 20275.0 36 21445.5 37 22616.0 38 25845.0 39 29074.0 40 33362.0 41 37650.0 42 43353.0 43 49056.0 44 58894.0 45 68732.0 46 92978.0 47 117224.0 48 121922.0 49 126620.0 50 121001.5 51 115383.0 52 100169.0 53 84955.0 54 76664.5 55 68374.0 56 61964.0 57 55554.0 58 49829.0 59 44104.0 60 37487.0 61 30870.0 62 26510.0 63 22150.0 64 19682.5 65 17215.0 66 14373.5 67 11532.0 68 9851.5 69 8171.0 70 6696.5 71 5222.0 72 4447.0 73 3672.0 74 3003.5 75 1794.0 76 1253.0 77 884.0 78 515.0 79 432.5 80 350.0 81 215.5 82 81.0 83 44.5 84 8.0 85 9.0 86 10.0 87 8.5 88 7.0 89 4.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1007232.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.46801562222426 #Duplication Level Percentage of deduplicated Percentage of total 1 71.54535980746736 27.5220801877131 2 11.5784300711526 8.907984577158587 3 4.628777345918855 5.341796377638127 4 2.4820357400151445 3.8191595848728612 5 1.6220368292219316 3.1198269043166182 6 1.216415330059779 2.8075850351911598 7 0.9273310010594421 2.497080840500923 8 0.7720053688954314 2.3758011672888366 9 0.6757268411637637 2.3394483614019514 >10 4.393184775432809 29.48727298026413 >50 0.09596325548325262 2.524536003996832 >100 0.05396155817715001 3.6973675715625447 >500 0.004253127734521747 1.0942400122672133 >1k 0.003987307251114138 3.227706381386281 >5k 5.316409668152184E-4 1.2381140144408391 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGC 6740 0.6691606303215148 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCG 5368 0.5329457364341085 No Hit GAATCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTC 4366 0.4334651798195451 RNA PCR Primer, Index 38 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTGC 4086 0.4056662218833397 RNA PCR Primer, Index 38 (96% over 25bp) CTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTGCT 3393 0.3368638009912314 RNA PCR Primer, Index 38 (96% over 26bp) GCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTGC 3177 0.3154188905833016 RNA PCR Primer, Index 27 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTGC 2640 0.2621044605413648 RNA PCR Primer, Index 27 (95% over 23bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGAGCTATGT 2094 0.2078964925657644 No Hit GAATCAGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTC 1625 0.16133323802262042 RNA PCR Primer, Index 38 (95% over 22bp) GAATGATCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTC 1503 0.1492208349218452 No Hit GAATGACTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCT 1474 0.14634165713559538 No Hit CCTGTATCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTGC 1357 0.1347256639979667 RNA PCR Primer, Index 38 (96% over 25bp) CTGTCACTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTGCT 1263 0.12539315669081205 RNA PCR Primer, Index 38 (96% over 26bp) GCTGTATCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTGC 1260 0.12509531071292415 RNA PCR Primer, Index 27 (95% over 23bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGAGCTATGTCGTA 1138 0.11298290761214895 No Hit GAACTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCT 1102 0.10940875587749396 RNA PCR Primer, Index 27 (95% over 21bp) TCTGTATCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTGC 1087 0.1079195259880544 RNA PCR Primer, Index 27 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3575144554581268 0.0 2 0.0 0.0 0.0 1.4271786440462575 0.0 3 0.0 0.0 0.0 1.935998856271445 0.0 4 0.0 0.0 0.0 2.5853030880670986 0.0 5 0.0 0.0 0.0 3.905356462066336 0.0 6 0.0 0.0 0.0 4.5976497966704795 0.0 7 9.928199262930487E-5 0.0 0.0 5.683397668064557 0.0 8 9.928199262930487E-5 0.0 0.0 7.253840227474901 0.0 9 9.928199262930487E-5 0.0 0.0 7.879515345024781 0.0 10 9.928199262930487E-5 0.0 0.0 9.705609035455586 0.0 11 9.928199262930487E-5 0.0 0.0 12.051046829330284 0.0 12 9.928199262930487E-5 0.0 0.0 14.948293938238658 0.0 13 9.928199262930487E-5 0.0 0.0 15.685661297496505 0.0 14 9.928199262930487E-5 0.0 0.0 15.981918763502351 0.0 15 9.928199262930487E-5 0.0 0.0 16.508709016393443 0.0 16 9.928199262930487E-5 0.0 0.0 17.400261310204602 0.0 17 9.928199262930487E-5 0.0 0.0 18.545578377176263 0.0 18 9.928199262930487E-5 0.0 0.0 19.71363102046003 0.0 19 9.928199262930487E-5 0.0 0.0 20.781607415173465 0.0 20 9.928199262930487E-5 0.0 0.0 21.738586542127337 0.0 21 9.928199262930487E-5 0.0 0.0 23.050995202694118 0.0 22 1.9856398525860974E-4 0.0 0.0 24.38276385182361 0.0 23 1.9856398525860974E-4 0.0 0.0 25.515074977760833 0.0 24 1.9856398525860974E-4 0.0 0.0 26.398585430169017 0.0 25 1.9856398525860974E-4 0.0 0.0 27.173183536662854 0.0 26 1.9856398525860974E-4 0.0 0.0 27.87044097089846 0.0 27 1.9856398525860974E-4 0.0 0.0 28.707983860719278 0.0 28 1.9856398525860974E-4 0.0 0.0 29.486652528910916 0.0 29 1.9856398525860974E-4 0.0 0.0 30.387934457999744 0.0 30 1.9856398525860974E-4 0.0 0.0 31.396043811157707 0.0 31 1.9856398525860974E-4 0.0 0.0 32.15843023255814 0.0 32 1.9856398525860974E-4 0.0 0.0 32.8717713495997 0.0 33 1.9856398525860974E-4 0.0 0.0 33.602685379336634 0.0 34 2.978459778879146E-4 0.0 0.0 34.448965084508835 0.0 35 2.978459778879146E-4 0.0 0.0 35.384499301054774 0.0 36 2.978459778879146E-4 0.0 0.0 36.1346740373618 0.0 37 2.978459778879146E-4 0.0 0.0 36.926646492565766 0.0 38 2.978459778879146E-4 0.0 0.0 37.90844611767696 0.0 39 2.978459778879146E-4 0.0 0.0 39.761743074088194 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGACGTT 30 2.1652322E-6 45.000004 27 CGACGTT 25 3.8904614E-5 45.0 27 ACGTTTC 20 7.032871E-4 45.0 17 CGACGGT 20 7.032871E-4 45.0 28 CGACATA 20 7.032871E-4 45.0 14 CACGACG 20 7.032871E-4 45.0 26 TGACCGA 20 7.032871E-4 45.0 11 ACTACGC 20 7.032871E-4 45.0 22 TATTACG 20 7.032871E-4 45.0 1 AATTCGC 25 3.8904614E-5 45.0 13 CGGTCTA 20 7.032871E-4 45.0 31 CGATAGG 20 7.032871E-4 45.0 2 CGATACC 35 1.2117198E-7 45.0 16 TCGGTCG 20 7.032871E-4 45.0 43 GTACGTC 20 7.032871E-4 45.0 22 TACGTCG 20 7.032871E-4 45.0 23 TCGTTAG 150 0.0 43.5 1 CTTTACG 105 0.0 42.857143 1 TACTACG 100 0.0 42.75 4 TACGGGA 535 0.0 42.476635 4 >>END_MODULE