##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934114.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1179359 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.967142320531746 33.0 31.0 34.0 30.0 34.0 2 32.17695799158695 33.0 31.0 34.0 30.0 34.0 3 32.249695809333716 34.0 31.0 34.0 30.0 34.0 4 35.700975699511346 37.0 35.0 37.0 35.0 37.0 5 29.215790102928793 37.0 35.0 37.0 0.0 37.0 6 23.400123287311157 35.0 10.0 37.0 0.0 37.0 7 30.31007352299003 35.0 19.0 37.0 17.0 37.0 8 34.34859529625839 35.0 32.0 37.0 32.0 37.0 9 36.97534084193193 38.0 37.0 39.0 34.0 39.0 10 36.84239489417556 39.0 37.0 39.0 33.0 39.0 11 37.05189768340259 39.0 37.0 39.0 34.0 39.0 12 37.198442543788616 39.0 37.0 39.0 34.0 39.0 13 37.225765860946495 39.0 37.0 39.0 34.0 39.0 14 38.39293548444537 40.0 38.0 41.0 34.0 41.0 15 38.23972598674364 40.0 38.0 41.0 34.0 41.0 16 38.4212864785023 40.0 38.0 41.0 34.0 41.0 17 38.42796807418267 40.0 38.0 41.0 34.0 41.0 18 38.485211034129556 40.0 38.0 41.0 34.0 41.0 19 38.499482345918416 40.0 38.0 41.0 34.0 41.0 20 38.46665773526127 40.0 38.0 41.0 34.0 41.0 21 38.357056672310975 40.0 38.0 41.0 34.0 41.0 22 38.4221861197481 40.0 38.0 41.0 34.0 41.0 23 38.365762248814825 40.0 38.0 41.0 34.0 41.0 24 38.35147652241599 40.0 38.0 41.0 34.0 41.0 25 38.13783334845454 40.0 37.0 41.0 34.0 41.0 26 38.03678184505312 40.0 37.0 41.0 34.0 41.0 27 37.166216563404355 40.0 37.0 41.0 33.0 41.0 28 37.55237124573603 40.0 37.0 41.0 33.0 41.0 29 37.86446196620368 40.0 37.0 41.0 33.0 41.0 30 37.90148462003512 40.0 37.0 41.0 33.0 41.0 31 37.95568016185063 40.0 37.0 41.0 34.0 41.0 32 37.972054310858695 40.0 37.0 41.0 34.0 41.0 33 36.7487881128647 40.0 37.0 41.0 32.0 41.0 34 37.29620582028034 40.0 37.0 41.0 32.0 41.0 35 37.6425761790939 40.0 37.0 41.0 32.0 41.0 36 37.800060880529166 40.0 37.0 41.0 33.0 41.0 37 37.874871858356954 40.0 37.0 41.0 34.0 41.0 38 37.80523233383558 40.0 37.0 41.0 33.0 41.0 39 37.855552889323775 40.0 37.0 41.0 33.0 41.0 40 37.87828048965582 40.0 37.0 41.0 33.0 41.0 41 37.83299402472021 40.0 37.0 41.0 33.0 41.0 42 37.886058443612164 40.0 37.0 41.0 33.0 41.0 43 37.77434352050563 40.0 37.0 41.0 33.0 41.0 44 37.7901012329579 40.0 37.0 41.0 33.0 41.0 45 37.741941173128794 40.0 37.0 41.0 33.0 41.0 46 37.708816399416975 40.0 37.0 41.0 33.0 41.0 47 37.68910230048696 40.0 37.0 41.0 33.0 41.0 48 37.641668906584 40.0 36.0 41.0 33.0 41.0 49 37.68326777512191 40.0 36.0 41.0 33.0 41.0 50 37.62298078871658 40.0 36.0 41.0 33.0 41.0 51 36.896095251742686 39.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 4.0 10 10.0 11 9.0 12 11.0 13 14.0 14 19.0 15 20.0 16 31.0 17 58.0 18 108.0 19 180.0 20 340.0 21 573.0 22 1040.0 23 1592.0 24 2587.0 25 3671.0 26 5004.0 27 6157.0 28 7840.0 29 10482.0 30 15063.0 31 21858.0 32 32351.0 33 51021.0 34 73390.0 35 99330.0 36 139880.0 37 219556.0 38 257255.0 39 229805.0 40 96.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.5489787248836 4.540602140654372 58.6854384457998 13.22498068866223 2 19.54120840219136 4.0949363171010695 53.84000970018459 22.52384558052298 3 20.222341119201193 4.00980532645276 53.11342856585654 22.65442498848951 4 18.937914579021317 4.560782594612836 51.76108377516939 24.740219051196455 5 13.833277229410212 23.048283007972977 43.39060455722134 19.727835205395472 6 15.034692574525653 29.892339821886292 42.04453436146245 13.028433242125596 7 83.63331267239238 1.8228546184834302 9.754620942393283 4.789211766730911 8 85.7950802088253 1.7344167467242797 7.130229217736075 5.340273826714342 9 80.38213978949582 4.3017435742636465 9.946928797762174 5.36918783847836 10 36.65906649289995 20.986739406745528 23.515061995541643 18.83913210481287 11 26.931663725803595 27.769491732373265 23.446634994094246 21.852209547728894 12 21.379071173408608 23.219647282973206 32.515290085546475 22.885991458071715 13 22.400558269364968 25.187580711216857 33.25654020531492 19.155320814103256 14 20.958758105038413 26.102738860686188 32.16153859850987 20.776964435765528 15 19.784900102513316 26.50838294361598 32.99487263844173 20.711844315428973 16 19.91522513500978 25.26533481323329 32.08285178643653 22.7365882653204 17 20.436610056819003 26.32955698816052 28.83278119724359 24.401051757776894 18 20.920432200882004 25.260756054772127 31.917422939071137 21.90138880527473 19 22.434898957823698 27.85809918777912 28.85016352103134 20.856838333365836 20 23.169280939900403 27.048422066563276 29.699947174694053 20.082349818842268 21 23.356501285868 27.215207583102348 28.994818371674786 20.43347275935487 22 21.337099220847936 25.96410422950094 28.065499987705184 24.63329656194594 23 20.42431524243254 26.557986160278592 27.899223222106244 25.11847537518262 24 21.287665587832034 25.6495265648543 29.077829566739222 23.98497828057445 25 20.07539688932717 26.820162478091913 27.62780459554724 25.47663603703368 26 19.723256446934307 26.994833634202987 30.55592063146167 22.72598928740104 27 20.71769495124046 27.973585651188486 29.40215829107167 21.906561106499378 28 18.46375870282077 25.80995269464175 32.23844478229275 23.487843820244724 29 19.621591050731794 24.931085445568314 31.20949600588116 24.23782749781873 30 21.222036716555348 25.220225563208487 30.226504397727915 23.331233322508243 31 19.178214606409075 27.369189534314824 29.85621850513711 23.596377354138987 32 18.147485201707028 27.796879491316894 29.20874814199917 24.84688716497691 33 19.80703076840894 27.991815893209786 27.19697734108105 25.004175997300226 34 18.14994416458432 24.90132351557075 30.61408782228312 26.33464449756181 35 17.961536733089755 24.57122894725016 30.027921947430762 27.439312372229317 36 20.92662200398691 24.88699369742377 29.164656393854628 25.021727904734693 37 18.640719238162426 26.667028445112983 31.45725771372415 23.234994603000445 38 17.762021572735698 28.350146138707554 28.623006226263588 25.26482606229316 39 18.588657058622523 25.030122295246827 29.700710301104245 26.68051034502641 40 19.482023709489646 23.132142121270963 30.969111186670045 26.416722982569347 41 18.044887095447613 23.45112896073206 29.634148719770653 28.869835224049673 42 19.797025333253064 23.266452369465107 29.122684441293956 27.81383785598787 43 20.29509250363969 23.69600774658098 29.94753929889033 26.061360450888998 44 18.990061550384574 24.441667041163885 29.336444627971638 27.231826780479906 45 20.203432542593053 23.392113851677053 28.983117100051807 27.421336505678084 46 20.713200984602654 23.030052765951673 30.5348074674463 25.721938781999377 47 18.06812005504685 23.551946438701023 32.67342683610334 25.706506670148784 48 17.977986346820604 23.274168425390403 31.676529368919898 27.0713158588691 49 19.587928696859905 21.74588060124186 32.21648370004384 26.449707001854396 50 19.169057089486746 21.207198147468244 30.770359152726183 28.853385610318828 51 18.137903725667925 20.89482507022883 28.83863183305507 32.12863937104817 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 109.0 1 342.0 2 575.0 3 1629.0 4 2683.0 5 1985.5 6 1288.0 7 1276.5 8 1265.0 9 1386.0 10 1507.0 11 1552.0 12 1597.0 13 1637.0 14 1677.0 15 1709.5 16 1742.0 17 1750.0 18 1758.0 19 2140.5 20 2523.0 21 2723.0 22 2923.0 23 3407.5 24 3892.0 25 4856.0 26 7189.0 27 8558.0 28 10516.0 29 12474.0 30 14938.0 31 17402.0 32 20863.0 33 24324.0 34 28300.0 35 32276.0 36 35885.5 37 39495.0 38 45807.5 39 52120.0 40 59603.0 41 67086.0 42 75808.5 43 84531.0 44 94545.5 45 104560.0 46 122306.5 47 140053.0 48 151223.5 49 162394.0 50 147461.5 51 132529.0 52 110503.0 53 88477.0 54 72789.0 55 57101.0 56 48225.5 57 39350.0 58 33945.0 59 28540.0 60 24739.5 61 20939.0 62 17677.5 63 14416.0 64 11975.0 65 9534.0 66 7420.5 67 5307.0 68 4263.0 69 3219.0 70 2747.5 71 2276.0 72 1824.0 73 1372.0 74 1069.0 75 560.5 76 355.0 77 294.0 78 233.0 79 181.0 80 129.0 81 132.0 82 135.0 83 89.5 84 44.0 85 24.5 86 5.0 87 2.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1179359.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.792045415747914 #Duplication Level Percentage of deduplicated Percentage of total 1 73.75957830159521 33.77601959433062 2 11.475858543332977 10.51006071202005 3 4.505965667299688 6.190121534363645 4 2.3448909627305152 4.295094138413305 5 1.500747720137374 3.436115387905539 6 1.087518001552284 2.987980423051537 7 0.8418789757679193 2.6985952205049535 8 0.674457369131448 2.47078259826025 9 0.537760493098097 2.216263763046875 >10 3.1495242844248303 23.580758479703068 >50 0.08075588104408114 2.51632456443781 >100 0.03707702379231863 2.926479290441902 >500 0.002192726851323021 0.6977543792268266 >1k 0.0017940492419915629 1.6976499142936319 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTTCTGC 3700 0.31372974641309387 TruSeq Adapter, Index 23 (95% over 22bp) CTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTTCTGCT 3316 0.28116968624481603 TruSeq Adapter, Index 20 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTTCTGC 2993 0.2537819273011865 TruSeq Adapter, Index 23 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTTCTGC 2545 0.21579519043819564 TruSeq Adapter, Index 23 (95% over 22bp) CTGTCACTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTTCTGCT 1267 0.10743124019064593 TruSeq Adapter, Index 20 (95% over 23bp) TCTGTATCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTTCTGC 1253 0.10624415466367748 TruSeq Adapter, Index 20 (95% over 22bp) TCCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTTCTG 1225 0.10386998360974053 TruSeq Adapter, Index 20 (95% over 21bp) CCTGTATCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTTCTGC 1222 0.10361560813967588 TruSeq Adapter, Index 20 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2971105490355354 0.0 2 0.0 0.0 0.0 1.1481660800485687 0.0 3 0.0 0.0 0.0 1.643180744794418 0.0 4 0.0 0.0 0.0 2.1498966811632423 0.0 5 0.0 0.0 0.0 3.032918729581069 0.0 6 0.0 0.0 0.0 3.8268245716529066 0.0 7 0.0 0.0 0.0 4.722734977220677 0.0 8 0.0 0.0 0.0 6.253227388776446 0.0 9 0.0 0.0 0.0 6.890013982171671 0.0 10 0.0 0.0 0.0 8.198775775654402 0.0 11 0.0 0.0 0.0 10.736425465019558 0.0 12 0.0 0.0 0.0 12.721826008874313 0.0 13 0.0 0.0 0.0 13.426530852776805 0.0 14 0.0 0.0 0.0 13.65012689096365 0.0 15 0.0 0.0 0.0 13.98234125486811 0.0 16 0.0 0.0 0.0 14.910302969664029 0.0 17 0.0 0.0 0.0 16.292070523055322 0.0 18 0.0 0.0 0.0 17.815016462332505 0.0 19 0.0 0.0 0.0 18.804367457237365 0.0 20 0.0 0.0 0.0 19.80770910299578 0.0 21 0.0 0.0 0.0 21.37432283130073 0.0 22 0.0 0.0 0.0 22.97968642287887 0.0 23 0.0 0.0 0.0 24.663228075590215 0.0 24 0.0 0.0 0.0 25.88363678913715 0.0 25 0.0 0.0 0.0 26.961340863977806 0.0 26 0.0 0.0 0.0 27.907871988088445 0.0 27 0.0 0.0 0.0 28.8000515534286 0.0 28 0.0 0.0 0.0 29.787028377279523 0.0 29 0.0 0.0 0.0 30.782993134406063 0.0 30 0.0 0.0 0.0 31.82364318244063 0.0 31 0.0 0.0 0.0 32.8625973940081 0.0 32 0.0 0.0 0.0 33.87365509569181 0.0 33 0.0 0.0 0.0 34.86097108683615 0.0 34 0.0 0.0 0.0 35.77468777530845 0.0 35 0.0 0.0 0.0 36.735294342096005 0.0 36 0.0 0.0 0.0 37.71328323267131 0.0 37 0.0 0.0 0.0 38.67304188122531 0.0 38 0.0 0.0 0.0 39.65094597997726 0.0 39 0.0 0.0 0.0 40.591372092806346 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAACGC 20 7.033362E-4 45.0 11 CCTTACG 25 3.8908678E-5 45.0 1 ACACCGT 20 7.033362E-4 45.0 25 TTATCCG 25 3.8908678E-5 45.0 1 GTCGTAG 50 2.1827873E-11 45.0 1 CGCAAGA 20 7.033362E-4 45.0 35 TCGCGCG 40 6.8157533E-9 45.0 1 AACGGGT 30 2.1655505E-6 44.999996 4 TCGTGCG 65 0.0 44.999996 1 TTCGCAG 65 0.0 44.999996 1 CGTTAGG 300 0.0 42.75 2 TAGGGCG 700 0.0 42.75 5 GCGCTAG 100 0.0 42.75 1 TTCGTAG 175 0.0 42.42857 1 CGTTGTC 65 0.0 41.53846 28 TATGGGT 1245 0.0 41.385544 4 CGCGAGG 60 3.6379788E-12 41.249996 2 TCGTTAG 170 0.0 41.02941 1 CTTACGG 265 0.0 40.75472 2 AGGGCGA 945 0.0 40.714283 6 >>END_MODULE