SRR2934112.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934112.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1340230
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTCTGC	2572	0.19190735918461757	No Hit
CTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTCTGCT	2230	0.16638935108153077	No Hit
GCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTCTGC	1812	0.13520067451109138	No Hit
TCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTCTGC	1660	0.12385933757638615	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTCCTA	20	7.033706E-4	45.0	19
CGATACG	35	1.2121382E-7	45.0	10
TCGTTAG	200	0.0	43.875004	1
CAACCCG	95	0.0	42.63158	23
CGTTAGG	370	0.0	42.56757	2
ACGAACG	60	3.6379788E-12	41.249996	21
TTATGGG	3625	0.0	40.22069	3
TTAGGGA	2985	0.0	40.025127	4
CGACGGT	45	1.9286745E-8	40.0	28
CGGTCTA	45	1.9286745E-8	40.0	31
TACCGGT	45	1.9286745E-8	40.0	40
TAGGGCG	625	0.0	39.960003	5
TTACGGG	1250	0.0	39.780003	3
AACCCGC	85	0.0	39.705883	21
TATGGGA	2470	0.0	39.443317	4
TATCGGC	40	3.4587902E-7	39.375	40
TACGGGA	920	0.0	39.374996	4
ACGGGTA	120	0.0	39.374996	5
TCTACGG	355	0.0	39.295776	2
CTTATGG	1055	0.0	39.241707	2