##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934106.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1366920 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.025482837327715 33.0 31.0 34.0 30.0 34.0 2 32.23942293623621 34.0 31.0 34.0 30.0 34.0 3 32.31835732888538 34.0 31.0 34.0 30.0 34.0 4 35.72105170748837 37.0 35.0 37.0 35.0 37.0 5 29.581219822667016 37.0 35.0 37.0 0.0 37.0 6 23.681570977087173 35.0 10.0 37.0 0.0 37.0 7 30.391515231322973 35.0 19.0 37.0 17.0 37.0 8 34.30329353583238 35.0 32.0 37.0 32.0 37.0 9 36.961708805197084 38.0 37.0 39.0 34.0 39.0 10 37.05618178093817 39.0 37.0 39.0 34.0 39.0 11 37.21012275773271 39.0 37.0 39.0 34.0 39.0 12 37.16074020425482 39.0 37.0 39.0 34.0 39.0 13 37.10501711877798 39.0 37.0 39.0 33.0 39.0 14 38.1437143358792 40.0 38.0 41.0 33.0 41.0 15 38.044286424955374 40.0 37.0 41.0 33.0 41.0 16 38.29210341497674 40.0 37.0 41.0 33.0 41.0 17 38.28620109443128 40.0 37.0 41.0 34.0 41.0 18 38.35088154390893 40.0 37.0 41.0 34.0 41.0 19 38.35313697948673 40.0 37.0 41.0 34.0 41.0 20 38.28879012670822 40.0 37.0 41.0 34.0 41.0 21 38.16741799081146 40.0 37.0 41.0 34.0 41.0 22 38.26800324817839 40.0 37.0 41.0 34.0 41.0 23 38.2165766833465 40.0 37.0 41.0 34.0 41.0 24 38.20320062622538 40.0 37.0 41.0 34.0 41.0 25 37.969006964562666 40.0 36.0 41.0 34.0 41.0 26 37.85374711029175 40.0 36.0 41.0 33.0 41.0 27 37.01512963450678 40.0 36.0 41.0 33.0 41.0 28 37.384473853627135 40.0 36.0 41.0 33.0 41.0 29 37.655935972844055 40.0 36.0 41.0 33.0 41.0 30 37.647235390512975 40.0 36.0 41.0 33.0 41.0 31 37.678419366166274 40.0 36.0 41.0 33.0 41.0 32 37.67549307933164 40.0 36.0 41.0 33.0 41.0 33 36.47675942995932 40.0 35.0 41.0 31.0 41.0 34 36.917544552717054 40.0 35.0 41.0 31.0 41.0 35 37.176230503613965 40.0 35.0 41.0 31.0 41.0 36 37.267467737687646 39.0 35.0 41.0 32.0 41.0 37 37.37990079887631 39.0 35.0 41.0 33.0 41.0 38 37.32250387733006 39.0 35.0 41.0 33.0 41.0 39 37.33629254089486 39.0 35.0 41.0 33.0 41.0 40 37.27365829748632 39.0 35.0 41.0 33.0 41.0 41 37.14830641149445 39.0 35.0 41.0 33.0 41.0 42 37.16235844087437 39.0 35.0 41.0 33.0 41.0 43 37.071597459983025 39.0 35.0 41.0 33.0 41.0 44 37.118554853246714 39.0 35.0 41.0 33.0 41.0 45 37.03262736663448 39.0 35.0 41.0 33.0 41.0 46 36.95314136891698 39.0 35.0 40.0 32.0 41.0 47 36.86829660843356 39.0 35.0 40.0 32.0 41.0 48 36.78964460246393 39.0 35.0 40.0 32.0 41.0 49 36.79756313463846 39.0 35.0 40.0 32.0 41.0 50 36.70538729406256 38.0 35.0 40.0 32.0 41.0 51 35.89293594358119 37.0 34.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 5.0 10 18.0 11 23.0 12 13.0 13 27.0 14 22.0 15 28.0 16 65.0 17 109.0 18 213.0 19 360.0 20 634.0 21 1183.0 22 1898.0 23 2702.0 24 4043.0 25 5632.0 26 7480.0 27 9441.0 28 11725.0 29 15551.0 30 21150.0 31 30025.0 32 43192.0 33 71297.0 34 97697.0 35 119991.0 36 159055.0 37 240137.0 38 279861.0 39 243202.0 40 140.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.979896409446052 4.228703947560939 54.190223275685476 17.601176367307524 2 19.319857782459838 5.192037573522957 53.731454657185495 21.756649986831707 3 21.48618792614052 5.287141895648611 51.49789307347906 21.728777104731805 4 18.689974541304537 4.687472566060926 51.948614403183804 24.673938489450737 5 15.523512714716297 22.260263951072485 41.2160184941328 21.000204840078425 6 16.4630702601469 29.989392210224448 39.36682468615574 14.180712843472918 7 84.31195680800631 1.9919234483364059 9.14706054487461 4.549059198782665 8 86.10496590875837 2.7931407836596143 6.5210107394726835 4.580882568109327 9 81.14469025253855 4.650893980627981 8.60116173587335 5.603254030960115 10 41.46680127586106 27.280016387206274 15.19591490357885 16.057267433353818 11 30.437553038948877 22.885830919146695 24.96349457173792 21.713121470166506 12 26.18675562578644 20.38875720598133 30.659219266672523 22.76526790155971 13 25.17235829456003 20.87042401896234 32.522605565797555 21.434612120680068 14 21.153395955871595 22.80587013139028 33.38629912504024 22.65443478769789 15 19.216340385684603 21.8765545898809 35.40221812542065 23.50488689901384 16 24.187004360167382 21.892210224446202 29.814546571854972 24.106238843531443 17 24.315395195037016 22.092148772422675 28.856041319170107 24.736414713370205 18 24.91601556784596 21.32546162174816 29.823983846896674 23.9345389635092 19 25.640564188101717 23.36698563193164 27.94230825505516 23.05014192491148 20 26.1310830187575 25.84123430778685 27.52355660901882 20.504126064436836 21 26.11806104234337 25.35569016474995 28.280440698797292 20.245808094109385 22 24.91747871126328 21.4978199163082 29.609706493430487 23.97499487899804 23 23.56882626635063 23.219500775466013 29.197026892576012 24.01464606560735 24 24.33097767243145 23.597430720159192 28.141661545664704 23.929930061744653 25 25.21032686623943 23.88193895765663 25.346838147075175 25.56089602902877 26 23.032437889561937 24.07763438972288 26.657522020308434 26.23240570040675 27 21.846413835484153 24.808474526673105 28.676733093377816 24.66837854446493 28 21.2657653703216 23.452579521844733 28.766131156175927 26.515523951657745 29 22.983495742252654 23.34072220759079 28.012831767769875 25.66295028238668 30 25.385830919146695 23.256591461095017 28.469625142656486 22.887952477101805 31 26.119670500102423 23.845214057881954 26.641939542913995 23.393175899101628 32 26.080458256518302 23.913542855470695 25.772978667368974 24.233020220642025 33 25.065402510754105 26.527814356363212 24.58205308284318 23.824730050039506 34 24.21502355660902 23.746232405700407 28.088549439616074 23.950194598074503 35 23.34855002487344 24.82171597459983 28.02826793082258 23.80146606970415 36 25.501199777602203 26.59921575512832 26.306952857519093 21.592631609750388 37 24.486802446375794 25.83538173411758 27.12901998653908 22.548795832967546 38 24.51730898662687 25.94102068884792 25.698504667427503 23.84316565709771 39 23.804392356538788 25.203011149152836 25.410192257045033 25.582404237263333 40 25.45891493284172 23.702264946010008 27.558964679717906 23.27985544143037 41 23.16404763994967 23.996356772890877 27.223904837152133 25.615690750007314 42 22.600810581453192 23.97155649196734 28.85238346062681 24.575249465952652 43 23.109838176338044 23.402540016972466 28.179849588856698 25.30777221783279 44 23.519225704503555 22.308035583647907 27.73929710590232 26.433441605946218 45 23.958315044040617 21.35538290463231 26.64845053112106 28.037851520206008 46 24.25328475697188 22.423184970590817 28.384762824452054 24.938767447985253 47 21.53922687501829 24.256576829660844 30.399511310098614 23.804684985222252 48 21.86053316946127 24.651259766482312 29.016474994878998 24.47173206917742 49 24.24150645246247 22.682307669797794 29.26959880607497 23.806587071664765 50 23.242911070143098 22.543162730810874 27.899511310098617 26.31441488894741 51 21.878602990665144 22.380388025634275 27.17810844819009 28.562900535510487 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 263.0 1 740.0 2 1217.0 3 2677.0 4 4137.0 5 2958.0 6 1779.0 7 1753.0 8 1727.0 9 1753.0 10 1779.0 11 1868.0 12 1957.0 13 1899.0 14 1841.0 15 1803.0 16 1765.0 17 1865.0 18 1965.0 19 2146.5 20 2328.0 21 2632.5 22 2937.0 23 3587.5 24 4238.0 25 5100.5 26 7746.5 27 9530.0 28 11486.5 29 13443.0 30 15956.0 31 18469.0 32 21185.5 33 23902.0 34 26401.0 35 28900.0 36 32026.5 37 35153.0 38 38840.0 39 42527.0 40 46833.5 41 51140.0 42 57467.5 43 63795.0 44 73762.5 45 83730.0 46 100857.0 47 117984.0 48 129394.5 49 140805.0 50 138316.0 51 135827.0 52 123547.0 53 111267.0 54 102373.0 55 93479.0 56 88313.0 57 83147.0 58 77934.0 59 72721.0 60 66302.0 61 59883.0 62 52877.5 63 45872.0 64 39960.0 65 34048.0 66 28712.5 67 23377.0 68 19160.5 69 14944.0 70 13149.5 71 11355.0 72 9730.5 73 8106.0 74 6577.0 75 3819.5 76 2591.0 77 1854.0 78 1117.0 79 812.0 80 507.0 81 374.0 82 241.0 83 170.0 84 99.0 85 56.0 86 13.0 87 8.0 88 3.0 89 2.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1366920.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.28438050798746 #Duplication Level Percentage of deduplicated Percentage of total 1 71.1315821819093 25.809653940235776 2 10.339381750950627 7.503161233376683 3 3.9677498867717667 4.319020399564528 4 2.3545488293043904 3.417333825884677 5 1.665773073684752 3.0220772022768685 6 1.3299728790558236 2.895434520537905 7 1.1549214926044473 2.933392762615881 8 0.9617600681208636 2.7917494615268277 9 0.8234126684839339 2.688931672053155 >10 6.157787854731018 38.64044036204319 >50 0.07616112635712664 1.8865966399492298 >100 0.032469620630851855 2.0616636954331624 >500 0.0022392836975686325 0.5307316740573702 >1k 0.0022392836975686325 1.4998126104447331 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTGC 3404 0.24902700962748367 TruSeq Adapter, Index 15 (95% over 23bp) CTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTGCT 2840 0.2077663652591227 TruSeq Adapter, Index 14 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTGC 1948 0.14251016884675036 TruSeq Adapter, Index 15 (95% over 23bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGC 1908 0.13958388201211483 No Hit TCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTGC 1716 0.12553770520586427 TruSeq Adapter, Index 15 (95% over 23bp) GAATCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTC 1563 0.11434465806338337 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCG 1522 0.11134521405788195 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.315717086588827E-5 0.0 0.0 0.2233488426535569 0.0 2 7.315717086588827E-5 0.0 0.0 0.787098001346092 0.0 3 7.315717086588827E-5 0.0 0.0 1.0739472683112399 0.0 4 7.315717086588827E-5 0.0 0.0 1.4368068358060457 0.0 5 7.315717086588827E-5 0.0 0.0 2.0950019020864423 0.0 6 7.315717086588827E-5 0.0 0.0 2.6248792906680714 0.0 7 7.315717086588827E-5 0.0 0.0 3.296242647704328 0.0 8 7.315717086588827E-5 0.0 0.0 4.354095338425072 0.0 9 7.315717086588827E-5 0.0 0.0 4.827714862610833 0.0 10 7.315717086588827E-5 0.0 0.0 5.783440142802798 0.0 11 7.315717086588827E-5 0.0 0.0 7.418649225997132 0.0 12 7.315717086588827E-5 0.0 0.0 9.132209639188833 0.0 13 7.315717086588827E-5 0.0 0.0 9.632458373569778 0.0 14 1.4631434173177654E-4 0.0 0.0 9.81425394317151 0.0 15 1.4631434173177654E-4 0.0 0.0 10.087349662013871 0.0 16 1.4631434173177654E-4 0.0 0.0 10.649855148801686 0.0 17 1.4631434173177654E-4 0.0 0.0 11.423126444854125 0.0 18 1.4631434173177654E-4 0.0 0.0 12.303353524712492 0.0 19 1.4631434173177654E-4 0.0 0.0 12.976911596874725 0.0 20 1.4631434173177654E-4 0.0 0.0 13.6716120914172 0.0 21 1.4631434173177654E-4 0.0 0.0 14.612998566119451 0.0 22 1.4631434173177654E-4 0.0 0.0 15.589573640008194 0.0 23 1.4631434173177654E-4 0.0 0.0 16.492625757176718 0.0 24 1.4631434173177654E-4 0.0 0.0 17.187838351915254 0.0 25 1.4631434173177654E-4 0.0 0.0 17.792628683463555 0.0 26 1.4631434173177654E-4 0.0 0.0 18.33801539226875 0.0 27 1.4631434173177654E-4 0.0 0.0 18.896936177684136 0.0 28 1.4631434173177654E-4 0.0 0.0 19.472390483715213 0.0 29 1.4631434173177654E-4 0.0 0.0 20.109369970444504 0.0 30 1.4631434173177654E-4 0.0 0.0 20.84086852193252 0.0 31 1.4631434173177654E-4 0.0 0.0 21.455827700231175 0.0 32 1.4631434173177654E-4 0.0 0.0 22.019576858923713 0.0 33 2.1947151259766484E-4 0.0 0.0 22.616466216018495 0.0 34 2.1947151259766484E-4 0.0 0.0 23.2641266496942 0.0 35 2.1947151259766484E-4 0.0 0.0 23.988748427120825 0.0 36 2.1947151259766484E-4 0.0 0.0 24.61731483920054 0.0 37 2.1947151259766484E-4 0.0 0.0 25.24763702338103 0.0 38 2.1947151259766484E-4 0.0 0.0 25.97057618587774 0.0 39 2.926286834635531E-4 0.0 0.0 27.07817575278729 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGATCGA 25 3.8911945E-5 45.0 41 TATCGCG 25 3.8911945E-5 45.0 32 CGATAAT 20 7.033756E-4 45.0 10 TACGTCA 20 7.033756E-4 45.0 38 TAATACG 105 0.0 42.85714 4 CCGTTAG 75 0.0 42.000004 1 CGATAAC 70 0.0 41.785717 16 CGTTAGG 420 0.0 41.249996 2 TAGGGCG 665 0.0 40.93985 5 TCGTTAG 165 0.0 40.909092 1 GGCGATA 55 6.184564E-11 40.909092 8 TTACGGG 1375 0.0 40.581818 3 TTAGGGA 2870 0.0 40.452965 4 TTATGGG 3890 0.0 40.43059 3 CGTATGG 245 0.0 40.408165 2 TACCGAT 45 1.9286745E-8 40.000004 29 TATGGGA 2325 0.0 39.870968 4 TAGGGAT 1575 0.0 39.857143 5 CTATGGG 1860 0.0 39.67742 3 TAGGGCA 675 0.0 39.666668 5 >>END_MODULE