##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934104.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1446283 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.74180502709359 31.0 31.0 34.0 30.0 34.0 2 31.95997671271805 33.0 31.0 34.0 30.0 34.0 3 32.03947221947572 33.0 31.0 34.0 30.0 34.0 4 35.55932483476609 37.0 35.0 37.0 33.0 37.0 5 29.35908601566913 35.0 35.0 37.0 0.0 37.0 6 23.503505192275647 35.0 10.0 37.0 0.0 37.0 7 30.274333584782507 35.0 19.0 37.0 17.0 37.0 8 34.22300545605528 35.0 32.0 37.0 32.0 37.0 9 36.79699201331966 37.0 37.0 39.0 34.0 39.0 10 36.69893236662534 38.0 35.0 39.0 33.0 39.0 11 36.904539429696676 39.0 37.0 39.0 33.0 39.0 12 36.988096382243306 39.0 37.0 39.0 33.0 39.0 13 36.917894354009555 39.0 37.0 39.0 33.0 39.0 14 37.81946341068795 40.0 37.0 41.0 33.0 41.0 15 37.70544423186887 40.0 37.0 41.0 33.0 41.0 16 37.98065869542821 40.0 37.0 41.0 33.0 41.0 17 38.00576996341656 40.0 37.0 41.0 33.0 41.0 18 38.08788667224879 40.0 37.0 41.0 33.0 41.0 19 38.092216391950956 40.0 37.0 41.0 34.0 41.0 20 38.03330399375503 40.0 37.0 41.0 33.0 41.0 21 37.91858716447611 39.0 37.0 41.0 33.0 41.0 22 38.02528758202924 40.0 37.0 41.0 34.0 41.0 23 37.99966742331895 39.0 37.0 41.0 34.0 41.0 24 37.96824549552197 40.0 37.0 41.0 34.0 41.0 25 37.743488653327184 39.0 36.0 41.0 33.0 41.0 26 37.63861844466125 39.0 36.0 41.0 33.0 41.0 27 36.82474384335569 39.0 36.0 40.0 32.0 41.0 28 37.19729402890029 39.0 36.0 40.0 32.0 41.0 29 37.519641729868916 39.0 36.0 41.0 32.0 41.0 30 37.501529092162464 39.0 36.0 40.0 33.0 41.0 31 37.44896676514901 39.0 36.0 40.0 33.0 41.0 32 37.52095336804761 39.0 36.0 40.0 33.0 41.0 33 36.38748640480459 39.0 36.0 40.0 31.0 41.0 34 36.85099112690946 39.0 36.0 40.0 31.0 41.0 35 37.212911995785056 39.0 36.0 40.0 31.0 41.0 36 37.33776031385282 39.0 36.0 40.0 32.0 41.0 37 37.372834362292856 39.0 36.0 40.0 32.0 41.0 38 37.33625369308773 39.0 36.0 40.0 33.0 41.0 39 37.39307106562132 39.0 36.0 40.0 33.0 41.0 40 37.30599682081584 39.0 36.0 40.0 32.0 41.0 41 37.21521030116512 39.0 36.0 40.0 32.0 41.0 42 37.305883426687586 39.0 36.0 40.0 33.0 41.0 43 37.20523714929927 39.0 35.0 40.0 32.0 41.0 44 37.23815740073001 39.0 35.0 40.0 32.0 41.0 45 37.17817052402607 39.0 35.0 40.0 32.0 41.0 46 37.08916443047453 39.0 35.0 40.0 32.0 41.0 47 37.01888980234159 39.0 35.0 40.0 32.0 41.0 48 37.01032163138196 39.0 35.0 40.0 32.0 41.0 49 37.087838272316 39.0 35.0 40.0 32.0 41.0 50 37.00484137613454 39.0 35.0 40.0 32.0 41.0 51 36.17311342247679 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 1.0 10 5.0 11 5.0 12 10.0 13 7.0 14 19.0 15 21.0 16 29.0 17 82.0 18 164.0 19 297.0 20 493.0 21 916.0 22 1473.0 23 2473.0 24 3928.0 25 5761.0 26 7589.0 27 9711.0 28 12780.0 29 17192.0 30 24209.0 31 34671.0 32 50746.0 33 76856.0 34 104216.0 35 129124.0 36 183274.0 37 274015.0 38 292388.0 39 213768.0 40 59.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.501209652606025 4.220474139570195 58.574497522269155 13.703818685554625 2 20.029551616108325 4.065801782915238 52.627874351008764 23.276772249967674 3 19.00188275738566 3.9457008068268795 53.687418022613834 23.36499841317363 4 18.785051058471957 4.034410969360768 51.71989161180765 25.460646360359622 5 14.311514413154272 21.8041697233529 43.31213185801119 20.57218400548164 6 14.872193063183348 29.125696699746868 41.342185450565346 14.659924786504439 7 78.25840447547264 1.4995682034567233 13.564012022543306 6.678015298527329 8 79.11833299568617 1.7049222040223109 10.694864006560264 8.481880793731241 9 74.02347949882561 4.12360513122259 14.265050477672766 7.587864892279035 10 35.79935600432281 21.222264245655932 24.85910433850083 18.119275411520427 11 25.91698858383871 25.43119154411688 26.321197165423367 22.330622706621043 12 21.979861479392344 21.413789693994882 34.30511179347334 22.301237033139433 13 22.744165560958677 24.413548385758528 35.37675544827672 17.465530605006073 14 19.588766513884213 26.200266476201406 33.83798329925747 20.372983710656907 15 17.02868664016655 26.81052048596298 35.5189821079277 20.641810765942765 16 18.99068163008208 25.183038174409848 31.47039687253463 24.355883322973444 17 19.23565443277699 26.819439902149167 28.157144901793078 25.78776076328077 18 20.440121331717236 24.101852818570084 33.02334328758618 22.434682562126497 19 20.604335389408572 27.808319671876113 29.440918547753103 22.146426390962212 20 20.23352276145125 28.755298928356343 30.816513780498006 20.194664529694396 21 20.297963814827387 28.318800677322486 31.621058949043864 19.762176558806264 22 18.167260487746866 25.707970016933064 30.39066351467866 25.73410598064141 23 17.995993868419944 26.50442548242633 28.777217183635567 26.72236346551816 24 20.53858062357091 25.898734894899544 28.576080891499107 24.98660359003044 25 18.779727065864705 26.51631803734124 25.83007613309428 28.87387876369977 26 16.79733496141488 26.34242399309126 28.109367253850042 28.750873791643823 27 17.691558291150486 27.12754004575868 28.336017224844657 26.84488443824618 28 14.966503789369023 26.07802207451792 29.64703311869116 29.3084410174219 29 15.94840014022152 23.804124089130553 31.313166233717745 28.934309536930186 30 19.128828866826204 25.110023418653192 30.19713292626685 25.564014788253754 31 17.396456986634014 30.758295575623855 27.247917592891568 24.597329844850556 32 18.74978825029403 27.880504714499168 26.858782133233948 26.51092490197285 33 18.293376884053814 27.319618636186693 26.72858631402015 27.658418165739345 34 16.032546880520616 26.85228271368743 29.08365790097789 28.031512504814067 35 16.56466957020168 23.98721412061125 27.387585970380623 32.060530338806444 36 18.740177406496517 25.641523823484064 26.316080601099507 29.302218168919914 37 15.953101847978576 29.60471774887764 29.09174760403047 25.350432799113314 38 17.735118230664398 28.182589437890094 30.154126128842 23.928166202603503 39 17.69708971204114 23.373779543837546 33.46281467734876 25.46631606677255 40 20.95143205029721 24.46291631720763 30.544160444394354 24.041491188100807 41 19.54237172116384 24.708303976469338 25.048278932961253 30.701045369405573 42 20.234075903540315 22.75847811251325 25.904266315790203 31.103179668156233 43 19.404362769941983 22.07451791938369 29.168496068888317 29.352623241786013 44 17.62794695090795 22.26673479533397 29.419138577996147 30.686179675761938 45 18.97035365830892 20.44406246910183 28.890403883610606 31.695179988978644 46 19.89257980630347 21.63967909461703 30.778623547397014 27.689117551682486 47 15.524900728280702 24.578661299344596 32.37063562248882 27.52580234988588 48 16.057092560722904 23.303945355093024 31.343796476899747 29.29516560728433 49 19.58807508627288 20.17544284209937 33.41890902402918 26.817573047598568 50 19.04931469152303 19.637304732199716 30.870721705226433 30.442658871050828 51 17.73560222999233 19.762660558134197 27.507272089902184 34.99446512197129 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 154.0 1 491.5 2 829.0 3 2371.0 4 3913.0 5 2814.0 6 1715.0 7 1764.0 8 1813.0 9 2031.0 10 2249.0 11 2370.0 12 2491.0 13 2521.5 14 2552.0 15 2648.5 16 2745.0 17 2930.5 18 3116.0 19 3292.5 20 3469.0 21 3673.0 22 3877.0 23 4542.0 24 5207.0 25 6337.0 26 7868.5 27 8270.0 28 10188.5 29 12107.0 30 14337.0 31 16567.0 32 19630.0 33 22693.0 34 27407.5 35 32122.0 36 35788.0 37 39454.0 38 44611.5 39 49769.0 40 58310.5 41 66852.0 42 80134.5 43 93417.0 44 113103.5 45 132790.0 46 164320.5 47 195851.0 48 218826.5 49 241802.0 50 217431.0 51 193060.0 52 151687.5 53 110315.0 54 88055.0 55 65795.0 56 53566.5 57 41338.0 58 34401.5 59 27465.0 60 22525.0 61 17585.0 62 14908.0 63 12231.0 64 10697.0 65 9163.0 66 7521.5 67 5880.0 68 4753.5 69 3627.0 70 3068.5 71 2510.0 72 2125.0 73 1740.0 74 1466.0 75 902.5 76 613.0 77 461.0 78 309.0 79 194.0 80 79.0 81 63.5 82 48.0 83 40.0 84 32.0 85 19.5 86 7.0 87 4.0 88 1.0 89 1.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1446283.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.505554940808274 #Duplication Level Percentage of deduplicated Percentage of total 1 72.38635356589724 32.21594835591813 2 13.150459249686211 11.7053697326754 3 5.06015053385537 6.756144227797814 4 2.5431042926307663 4.527290712635358 5 1.5507663329601509 3.450885811595689 6 1.037661090226713 2.7709009596614385 7 0.7426794236358699 2.3137351924423823 8 0.5702595473348425 2.0303774091545033 9 0.45713326033844587 1.8310472489937164 >10 2.3142083347154196 17.03881780759113 >50 0.11401166580417192 3.505609811099871 >100 0.06452934495803711 5.473759791684421 >500 0.00527811954234639 1.632897297019234 >1k 0.002724190731533621 2.416724372074548 >5k 6.810476828834053E-4 2.330491269656436 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGC 8811 0.6092168683445771 Illumina PCR Primer Index 10 (95% over 23bp) CTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGCT 8330 0.5759592002395105 Illumina PCR Primer Index 10 (95% over 24bp) TCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGC 7739 0.5350958284097925 Illumina PCR Primer Index 10 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGC 5875 0.4062137216575179 Illumina PCR Primer Index 10 (95% over 23bp) TCTGTATCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGC 3280 0.2267882565168781 Illumina PCR Primer Index 10 (95% over 23bp) CTGTCACTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGCT 3088 0.21351284637930473 Illumina PCR Primer Index 10 (95% over 24bp) CCTGTATCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGC 2984 0.20632199922145253 Illumina PCR Primer Index 10 (95% over 23bp) TCCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTG 2914 0.20148200594212887 Illumina PCR Primer Index 10 (95% over 22bp) GCTGTATCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGC 2511 0.17361747320545148 Illumina PCR Primer Index 10 (95% over 23bp) CGCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTG 2384 0.16483634254153579 Illumina PCR Primer Index 10 (95% over 22bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCC 2129 0.14720493845257118 No Hit TTCCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCT 1983 0.1371100953271248 Illumina PCR Primer Index 10 (95% over 21bp) GCCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTG 1584 0.10952213363498015 Illumina PCR Primer Index 10 (95% over 22bp) CGTTCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTC 1546 0.10689470871191875 No Hit TGCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTG 1544 0.10675642318965237 Illumina PCR Primer Index 10 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6191042831866239 0.0 2 0.0 0.0 0.0 2.324026487208935 0.0 3 0.0 0.0 0.0 3.267272034587975 0.0 4 0.0 0.0 0.0 4.28768090339166 0.0 5 0.0 0.0 0.0 5.926433485009504 0.0 6 0.0 6.914276113319454E-5 0.0 7.333834387875679 0.0 7 0.0 6.914276113319454E-5 0.0 8.907454488506053 0.0 8 0.0 6.914276113319454E-5 0.0 11.438148688742107 0.0 9 0.0 6.914276113319454E-5 0.0 12.44901585650941 0.0 10 0.0 6.914276113319454E-5 0.0 14.508571282383876 0.0 11 0.0 6.914276113319454E-5 0.0 18.46823892695966 0.0 12 0.0 6.914276113319454E-5 0.0 21.524694682852527 0.0 13 0.0 6.914276113319454E-5 0.0 22.64121198963135 0.0 14 0.0 6.914276113319454E-5 0.0 23.001238346851895 0.0 15 0.0 6.914276113319454E-5 0.0 23.520638768484453 0.0 16 0.0 6.914276113319454E-5 0.0 24.881437450346855 0.0 17 0.0 6.914276113319454E-5 0.0 26.854771853088227 0.0 18 0.0 6.914276113319454E-5 0.0 29.032768828783855 0.0 19 0.0 6.914276113319454E-5 0.0 30.425788037334325 0.0 20 6.914276113319454E-5 6.914276113319454E-5 0.0 31.781539297634005 0.0 21 6.914276113319454E-5 6.914276113319454E-5 0.0 33.80230563451275 0.0 22 6.914276113319454E-5 6.914276113319454E-5 0.0 35.801845143723604 0.0 23 6.914276113319454E-5 6.914276113319454E-5 0.0 37.87232512585711 0.0 24 6.914276113319454E-5 6.914276113319454E-5 0.0 39.303511138553105 0.0 25 6.914276113319454E-5 6.914276113319454E-5 0.0 40.599384767711435 0.0 26 1.3828552226638908E-4 6.914276113319454E-5 0.0 41.71811464284652 0.0 27 1.3828552226638908E-4 6.914276113319454E-5 0.0 42.89492443733349 0.0 28 1.3828552226638908E-4 6.914276113319454E-5 0.0 44.066133668168675 0.0 29 1.3828552226638908E-4 6.914276113319454E-5 0.0 45.30295937931926 0.0 30 1.3828552226638908E-4 6.914276113319454E-5 0.0 46.561150203660006 0.0 31 1.3828552226638908E-4 6.914276113319454E-5 0.0 47.73816742643037 0.0 32 1.3828552226638908E-4 6.914276113319454E-5 0.0 48.800061951913975 0.0 33 1.3828552226638908E-4 6.914276113319454E-5 0.0 49.84646849890374 0.0 34 1.3828552226638908E-4 6.914276113319454E-5 0.0 50.86563279800703 0.0 35 1.3828552226638908E-4 6.914276113319454E-5 0.0 51.913698771263995 0.0 36 1.3828552226638908E-4 6.914276113319454E-5 0.0 52.93217164275595 0.0 37 1.3828552226638908E-4 6.914276113319454E-5 0.0 53.94939994454751 0.0 38 1.3828552226638908E-4 6.914276113319454E-5 0.0 55.00175276899473 0.0 39 1.3828552226638908E-4 6.914276113319454E-5 0.0 56.386543988970345 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAA 20 7.033891E-4 45.000004 35 TCGTTAG 160 0.0 45.000004 1 CAACGAA 30 2.1658925E-6 45.000004 18 ACGCAAT 20 7.033891E-4 45.000004 26 GACCGAC 20 7.033891E-4 45.000004 9 TCGATCC 20 7.033891E-4 45.000004 17 TCGTCAG 20 7.033891E-4 45.000004 1 TCCGTGA 20 7.033891E-4 45.000004 17 ACCAACG 20 7.033891E-4 45.000004 21 ATCATCG 20 7.033891E-4 45.000004 24 CCAACGA 25 3.891308E-5 45.0 22 CGTTATT 410 0.0 43.902443 1 TGACGTA 130 0.0 43.26923 12 CGTTTAT 505 0.0 43.21782 1 AAGCTCG 100 0.0 42.75 33 CGTAATA 85 0.0 42.35294 16 TAGGGCG 610 0.0 42.049183 5 CGTAGAT 140 0.0 41.785713 15 TTCGTAG 255 0.0 41.47059 1 TAGGGTG 810 0.0 41.38889 5 >>END_MODULE