##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934101.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1758582 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.86823759142309 33.0 31.0 34.0 30.0 34.0 2 32.049681504757814 33.0 31.0 34.0 30.0 34.0 3 32.128999387006125 34.0 31.0 34.0 30.0 34.0 4 35.62018660488962 37.0 35.0 37.0 33.0 37.0 5 29.424873562904658 37.0 35.0 37.0 0.0 37.0 6 23.647157198242674 35.0 10.0 37.0 0.0 37.0 7 30.343686561104345 35.0 19.0 37.0 17.0 37.0 8 34.115062021560554 35.0 32.0 37.0 32.0 37.0 9 36.789813611193566 37.0 37.0 39.0 34.0 39.0 10 36.89189073924332 39.0 37.0 39.0 33.0 39.0 11 37.068901535441626 39.0 37.0 39.0 34.0 39.0 12 37.064211393042804 39.0 37.0 39.0 34.0 39.0 13 36.98992711172979 39.0 37.0 39.0 33.0 39.0 14 37.92099941884996 40.0 37.0 41.0 33.0 41.0 15 37.816601102479154 40.0 37.0 41.0 33.0 41.0 16 38.111225976383245 40.0 37.0 41.0 33.0 41.0 17 38.108291794184176 40.0 37.0 41.0 33.0 41.0 18 38.199077438527176 40.0 37.0 41.0 34.0 41.0 19 38.214958415359646 40.0 37.0 41.0 34.0 41.0 20 38.115649995280286 40.0 37.0 41.0 33.0 41.0 21 38.034191183578585 40.0 37.0 41.0 33.0 41.0 22 38.15802333925856 40.0 37.0 41.0 34.0 41.0 23 38.08516008920824 40.0 37.0 41.0 34.0 41.0 24 38.057526461660586 40.0 37.0 41.0 34.0 41.0 25 37.8286784466121 40.0 36.0 41.0 33.0 41.0 26 37.7456848756555 40.0 36.0 41.0 33.0 41.0 27 36.90046014345649 40.0 36.0 41.0 32.0 41.0 28 37.264783217387645 40.0 36.0 41.0 32.0 41.0 29 37.535752100271694 40.0 36.0 41.0 32.0 41.0 30 37.56699659157207 40.0 36.0 41.0 33.0 41.0 31 37.59814555135899 40.0 36.0 41.0 33.0 41.0 32 37.58345928708471 40.0 36.0 41.0 33.0 41.0 33 36.42478087459101 39.0 35.0 41.0 31.0 41.0 34 36.85814878123397 40.0 35.0 41.0 31.0 41.0 35 37.14553828027354 40.0 35.0 41.0 31.0 41.0 36 37.30544722964297 39.0 35.0 41.0 32.0 41.0 37 37.38658760296648 39.0 36.0 41.0 33.0 41.0 38 37.307402782469055 39.0 35.0 41.0 33.0 41.0 39 37.321364599432954 39.0 35.0 41.0 33.0 41.0 40 37.26301304118887 39.0 35.0 41.0 33.0 41.0 41 37.181393873018145 39.0 35.0 41.0 32.0 41.0 42 37.21958145824306 39.0 35.0 41.0 33.0 41.0 43 37.0916238196456 39.0 35.0 41.0 32.0 41.0 44 37.107944923807935 39.0 35.0 41.0 32.0 41.0 45 37.06306672080119 39.0 35.0 41.0 32.0 41.0 46 37.014154585910696 39.0 35.0 41.0 32.0 41.0 47 36.936136045973406 39.0 35.0 40.0 32.0 41.0 48 36.88161996426666 39.0 35.0 40.0 32.0 41.0 49 36.91629164861235 39.0 35.0 40.0 32.0 41.0 50 36.8106878155241 39.0 35.0 40.0 32.0 41.0 51 36.04877736721973 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 6.0 10 16.0 11 19.0 12 20.0 13 22.0 14 36.0 15 50.0 16 89.0 17 128.0 18 268.0 19 517.0 20 985.0 21 1749.0 22 2972.0 23 4395.0 24 6020.0 25 7959.0 26 9985.0 27 12238.0 28 15417.0 29 20732.0 30 29131.0 31 40968.0 32 58997.0 33 92748.0 34 125825.0 35 151742.0 36 207117.0 37 308989.0 38 355576.0 39 303709.0 40 154.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.097787876823485 3.916109683824809 53.01703304139358 16.96906939795813 2 19.80561611571141 7.1155055607301785 51.49205439382412 21.586823929734297 3 20.845146828524346 7.393627365684398 49.83560618725769 21.925619618533567 4 18.770691386583056 4.792554455805871 51.57826021192074 24.858493945690334 5 16.572670481103525 22.439215231362542 39.707104928857454 21.281009358676478 6 16.262420518349444 31.094597806641943 38.844762427910666 13.798219247097945 7 80.27518762275515 2.1625946359055193 12.151551647861742 5.4106660934775865 8 81.02857870716294 4.2665056278296944 8.631556560911006 6.073359104096369 9 75.55524848997658 5.119920481387846 10.898951541639798 8.425879486995774 10 38.8946890164917 28.088994428465664 17.355858299470825 15.660458255571818 11 29.67402145592301 22.922274878282618 27.08335465733187 20.3203490084625 12 25.486784238665017 20.13485865316488 31.77662457593675 22.601732532233356 13 25.755239164281225 20.51510819512539 34.04862554035012 19.681027100243263 14 20.859021643574195 23.897833595476357 33.46082241260288 21.782322348346568 15 18.581846055515182 22.717962540273927 36.44720576009534 22.252985644115544 16 22.242863852808682 23.001998200823163 30.533975669033346 24.221162277334805 17 22.234846029357744 23.374400511321053 30.418086844969412 23.97266661435179 18 22.814176421685197 21.565499931194566 31.577145677597063 24.04317796952317 19 23.465951545051638 23.721668935540112 29.383560163813797 23.428819355594452 20 24.03254440225136 26.78100879003652 29.558928727804563 19.627518079907563 21 23.973747030277803 25.937260815816384 30.331084930927304 19.757907222978513 22 21.554127131973374 22.204878703409907 31.48053374821305 24.76046041640367 23 21.20327627599964 24.51219220940508 29.98796757842398 24.2965639361713 24 22.325202919170103 24.798104381825812 28.169627574943906 24.70706512406018 25 22.335267846480857 26.305000278633585 26.026821609683253 25.332910265202308 26 21.33366541907059 24.093843790053576 28.083592348835595 26.488898442040238 27 20.811369614837407 25.321025690016164 29.29712688973275 24.570477805413677 28 18.951007118235033 24.058360656483462 30.98831899791992 26.00231322736159 29 22.162060114342125 23.778191747669432 29.104755990906312 24.954992147082137 30 22.94894409245631 22.984711546006952 30.25949315982991 23.80685120170683 31 22.547939191917123 23.636259213388968 28.893108197399954 24.92269339729396 32 23.945030712244296 25.467393615992883 27.552141441229356 23.035434230533465 33 23.293426180866174 24.384589402143316 26.943696682895652 25.378287734094858 34 21.699300914031873 22.419654016702093 30.68517703467908 25.195868034586955 35 21.675929811632326 23.691985929572805 28.469243970426174 26.1628402883687 36 24.533004431979858 23.292459492932373 28.291942030567807 23.88259404451996 37 20.352022254293516 24.80009462168952 30.01639957647696 24.831483547540007 38 21.19457608459543 24.698421796652077 30.44703061898734 23.65997149976515 39 22.197315791927817 23.13386580779287 29.419782529333293 25.249035870946024 40 22.400547714010493 20.96660832420666 32.10643575335128 24.526408208431565 41 21.573347162657186 21.669788500052885 28.52605110253602 28.23081323475391 42 22.562382646928036 21.205152787871135 31.194052935831255 25.038411629369573 43 23.968856726612692 21.093016987550197 29.87077088244961 25.067355403387502 44 21.718350352727366 21.62810719090722 30.022938936029142 26.630603520336273 45 21.56146258747104 20.07361612935877 28.68566833960543 29.67925294356476 46 22.787336615523188 21.450634659060537 30.289119301801108 25.472909423615164 47 18.452082416401396 22.788075847472566 34.2145546809873 24.545287055138743 48 19.7988493001748 23.574504913617904 30.802316866657343 25.824328919549956 49 22.343911173888962 20.450681287537346 33.19242435098278 24.012983187590912 50 21.59324956129427 20.593466781759396 30.228672873940482 27.584610783005854 51 20.13400569322329 20.36584020534726 28.543167165363915 30.956986936065533 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 265.0 1 933.5 2 1602.0 3 3721.5 4 5841.0 5 4085.0 6 2329.0 7 2312.0 8 2295.0 9 2416.5 10 2538.0 11 2594.5 12 2651.0 13 2742.5 14 2834.0 15 2759.0 16 2684.0 17 2768.5 18 2853.0 19 3010.5 20 3168.0 21 4012.0 22 4856.0 23 5195.0 24 5534.0 25 7226.5 26 10672.5 27 12426.0 28 14999.5 29 17573.0 30 21068.0 31 24563.0 32 28193.0 33 31823.0 34 36128.0 35 40433.0 36 43881.5 37 47330.0 38 53011.5 39 58693.0 40 66097.5 41 73502.0 42 83591.0 43 93680.0 44 109572.0 45 125464.0 46 163025.0 47 200586.0 48 206276.5 49 211967.0 50 201143.5 51 190320.0 52 163489.0 53 136658.0 54 121320.5 55 105983.0 56 95501.5 57 85020.0 58 77435.5 59 69851.0 60 60620.5 61 51390.0 62 46737.0 63 42084.0 64 36338.5 65 30593.0 66 25714.5 67 20836.0 68 17335.0 69 13834.0 70 11820.5 71 9807.0 72 8404.5 73 7002.0 74 5855.0 75 3387.0 76 2066.0 77 1548.5 78 1031.0 79 810.5 80 590.0 81 414.5 82 239.0 83 151.5 84 64.0 85 47.5 86 31.0 87 30.0 88 29.0 89 32.0 90 35.0 91 18.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1758582.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.53843285589393 #Duplication Level Percentage of deduplicated Percentage of total 1 71.46735001110791 26.827723197806442 2 11.775307022479362 8.840531440417555 3 4.465257750484629 5.028563347524817 4 2.2928977070470093 3.442871464856692 5 1.409192824807466 2.6449445117521284 6 1.0648780561573181 2.3984312046465806 7 0.8709447881486162 2.288573171577531 8 0.7584081675852521 2.277556326100843 9 0.6396195937309179 2.1609285455323994 >10 5.105495889522173 32.881967381613606 >50 0.0940622954576358 2.431695087694669 >100 0.04862853394825921 3.179112565639756 >500 0.004067094867470809 0.9972824568865143 >1k 0.003006113597695815 2.3808923830940825 >5k 8.84151058145828E-4 2.21892691485639 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGC 8777 0.4990952938219543 No Hit GAATCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTC 6987 0.39730874079229744 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCG 6885 0.3915086131894902 No Hit CCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGC 5443 0.30951073080470515 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGCT 5336 0.30342628322136816 TruSeq Adapter, Index 19 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGC 4714 0.268056877643465 TruSeq Adapter, Index 13 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGC 3781 0.21500276927661038 TruSeq Adapter, Index 13 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCTATCTGT 2689 0.1529072855289091 No Hit GAATCAGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTC 2645 0.15040526970024712 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTC 2230 0.1268067113162764 No Hit GAACTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCT 1967 0.11185148034041062 No Hit CTGTCACTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGCT 1918 0.1090651445312189 TruSeq Adapter, Index 19 (95% over 22bp) GAATGACTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCT 1916 0.10895141653900699 No Hit CCTGTATCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGC 1907 0.1084396405740534 TruSeq Adapter, Index 19 (95% over 21bp) GCTGTATCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGC 1856 0.10553957677264979 TruSeq Adapter, Index 19 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1835 0.10434543285442477 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3215658979791673 0.0 2 0.0 0.0 0.0 1.1807808791401253 0.0 3 0.0 0.0 0.0 1.6117531056271472 0.0 4 0.0 0.0 0.0 2.2142840083658313 0.0 5 0.0 0.0 0.0 3.398362999280102 0.0 6 0.0 0.0 0.0 4.200657120339001 0.0 7 5.686399610595355E-5 0.0 0.0 5.242576120988387 0.0 8 1.137279922119071E-4 0.0 0.0 6.807188973843699 0.0 9 1.137279922119071E-4 0.0 0.0 7.517704605187588 0.0 10 1.137279922119071E-4 0.0 0.0 9.204347593686277 0.0 11 1.137279922119071E-4 0.0 0.0 11.371320757291954 0.0 12 1.137279922119071E-4 0.0 0.0 13.97074461128341 0.0 13 1.137279922119071E-4 0.0 0.0 14.685923090307988 0.0 14 1.137279922119071E-4 0.0 0.0 14.966831231071398 0.0 15 1.137279922119071E-4 0.0 0.0 15.400987841340353 0.0 16 1.137279922119071E-4 0.0 0.0 16.203054506414826 0.0 17 1.137279922119071E-4 0.0 0.0 17.249863810729327 0.0 18 1.137279922119071E-4 0.0 0.0 18.36587659830477 0.0 19 1.7059198831786065E-4 0.0 0.0 19.340582355556922 0.0 20 1.7059198831786065E-4 0.0 0.0 20.228968566720233 0.0 21 1.7059198831786065E-4 0.0 0.0 21.37938407193978 0.0 22 1.7059198831786065E-4 0.0 0.0 22.56949064644128 0.0 23 1.7059198831786065E-4 0.0 0.0 23.656957707971536 0.0 24 1.7059198831786065E-4 0.0 0.0 24.508894097630932 0.0 25 1.7059198831786065E-4 0.0 0.0 25.241416095467827 0.0 26 1.7059198831786065E-4 0.0 0.0 25.90183454624237 0.0 27 1.7059198831786065E-4 0.0 0.0 26.606208866006817 0.0 28 1.7059198831786065E-4 0.0 0.0 27.309616497837464 0.0 29 1.7059198831786065E-4 0.0 0.0 28.077280445267835 0.0 30 1.7059198831786065E-4 0.0 0.0 28.91784403570604 0.0 31 1.7059198831786065E-4 0.0 0.0 29.645248273893397 0.0 32 2.274559844238142E-4 0.0 0.0 30.348485313735726 0.0 33 2.274559844238142E-4 0.0 0.0 31.03619848264113 0.0 34 2.274559844238142E-4 0.0 0.0 31.80306633412602 0.0 35 2.274559844238142E-4 0.0 0.0 32.60405258327448 0.0 36 2.274559844238142E-4 0.0 0.0 33.33066072551635 0.0 37 2.274559844238142E-4 0.0 0.0 34.05647277181274 0.0 38 2.8431998052976773E-4 0.0 0.0 34.899197194102975 0.0 39 2.8431998052976773E-4 0.0 0.0 36.21099272027122 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGATAAG 25 3.8916514E-5 45.000004 42 TCGTTAG 200 0.0 43.875004 1 CCTACGG 120 0.0 41.250004 2 TAGGGCG 820 0.0 41.158535 5 TTAGGGA 3970 0.0 41.03275 4 TCGACGT 55 6.184564E-11 40.909092 26 CCGATGA 775 0.0 40.64516 18 TTACGGG 1525 0.0 40.573772 3 ACGCTAA 50 1.0822987E-9 40.500004 27 AATACGG 250 0.0 40.499996 5 TTTACGG 980 0.0 40.408165 2 TAGGGAT 2350 0.0 40.404255 5 TATGGGA 3175 0.0 40.03937 4 CTACGGG 710 0.0 39.929577 3 TTCCGAA 175 0.0 39.857143 16 AGGGCGA 1160 0.0 39.762928 6 CGTTAGG 505 0.0 39.653465 2 TTCGTAG 365 0.0 39.452053 1 TACGGGT 240 0.0 39.375004 4 TAGGGAG 2050 0.0 39.292686 5 >>END_MODULE