##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934099.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 814713 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.790323709085285 31.0 31.0 34.0 30.0 34.0 2 32.00712029880461 33.0 31.0 34.0 30.0 34.0 3 32.09418408691159 33.0 31.0 34.0 30.0 34.0 4 35.56974419212655 37.0 35.0 37.0 33.0 37.0 5 29.398150023382467 35.0 35.0 37.0 0.0 37.0 6 23.53544499719533 35.0 10.0 37.0 0.0 37.0 7 30.27271812282362 35.0 19.0 37.0 17.0 37.0 8 34.135759463762085 35.0 32.0 37.0 32.0 37.0 9 36.70833532790075 37.0 35.0 39.0 33.0 39.0 10 36.821332174643096 38.0 37.0 39.0 33.0 39.0 11 37.05895695784896 39.0 37.0 39.0 34.0 39.0 12 37.10830685161523 39.0 37.0 39.0 34.0 39.0 13 37.053706028994256 39.0 37.0 39.0 33.0 39.0 14 38.15535532144448 40.0 37.0 41.0 33.0 41.0 15 38.00549273179635 40.0 37.0 41.0 33.0 41.0 16 38.2164443184287 40.0 37.0 41.0 34.0 41.0 17 38.21710467367036 40.0 37.0 41.0 34.0 41.0 18 38.30455019129436 40.0 37.0 41.0 34.0 41.0 19 38.30398066558408 40.0 37.0 41.0 34.0 41.0 20 38.27954138451209 40.0 37.0 41.0 34.0 41.0 21 38.1294934535229 40.0 37.0 41.0 34.0 41.0 22 38.1925365128579 40.0 37.0 41.0 34.0 41.0 23 38.148708809114375 40.0 37.0 41.0 34.0 41.0 24 38.13243436645788 40.0 37.0 41.0 34.0 41.0 25 37.88353690195198 40.0 37.0 41.0 33.0 41.0 26 37.78516851946637 40.0 37.0 41.0 33.0 41.0 27 36.96636607001484 40.0 36.0 41.0 32.0 41.0 28 37.358278313958415 40.0 36.0 41.0 32.0 41.0 29 37.68552115898482 40.0 36.0 41.0 33.0 41.0 30 37.69978753254213 40.0 36.0 41.0 33.0 41.0 31 37.728107934941505 40.0 36.0 41.0 33.0 41.0 32 37.73344723847539 40.0 36.0 41.0 33.0 41.0 33 36.56381204178649 40.0 36.0 41.0 31.0 41.0 34 37.02528743250691 39.0 36.0 41.0 31.0 41.0 35 37.340171324135 40.0 36.0 41.0 31.0 41.0 36 37.4424269650785 39.0 36.0 41.0 33.0 41.0 37 37.5179198073432 39.0 36.0 41.0 33.0 41.0 38 37.457887624230864 39.0 36.0 41.0 33.0 41.0 39 37.51901344399807 39.0 36.0 41.0 33.0 41.0 40 37.441256000579344 39.0 36.0 41.0 33.0 41.0 41 37.37072809688811 39.0 36.0 41.0 33.0 41.0 42 37.394345002473266 39.0 35.0 41.0 33.0 41.0 43 37.23541418880023 39.0 35.0 40.0 33.0 41.0 44 37.236183784964766 39.0 35.0 40.0 33.0 41.0 45 37.23857972071146 39.0 35.0 40.0 33.0 41.0 46 37.22839822121409 39.0 35.0 40.0 33.0 41.0 47 37.19179514749366 39.0 35.0 40.0 33.0 41.0 48 37.16249157678839 39.0 35.0 40.0 33.0 41.0 49 37.196357490306404 39.0 35.0 40.0 33.0 41.0 50 37.097542324720486 39.0 35.0 40.0 33.0 41.0 51 36.383149649017504 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 7.0 10 6.0 11 8.0 12 12.0 13 12.0 14 17.0 15 22.0 16 23.0 17 52.0 18 107.0 19 168.0 20 324.0 21 541.0 22 859.0 23 1366.0 24 1931.0 25 2825.0 26 3814.0 27 5007.0 28 6506.0 29 8933.0 30 12480.0 31 17771.0 32 25796.0 33 40587.0 34 56300.0 35 75139.0 36 100914.0 37 150590.0 38 166718.0 39 135820.0 40 56.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.01324147276403 4.489556445030336 52.27546387500874 19.22173820719689 2 19.991948084785687 4.609353232365263 52.21237417348195 23.1863245093671 3 21.559493956767597 4.571180280663252 50.9632226317734 22.906103130795753 4 20.249953050951685 4.651208462366502 49.25525921398087 25.84357927270094 5 14.62956894022803 22.635701161022347 40.43350234990727 22.301227548842352 6 15.997289843171766 29.60600849624346 39.477214675597416 14.919486984987351 7 79.47399881921609 2.261900816606584 11.756900896389281 6.507199467788043 8 78.10934648152171 2.875613866478134 10.144063001326847 8.870976650673304 9 71.34230090841805 5.875565996860244 14.59360535550556 8.188527739216141 10 34.77322689094196 26.56530581934988 20.86747112173244 17.793996167975717 11 26.485523122866578 24.14592623414626 27.568726655889865 21.799823987097298 12 22.703086853898245 19.770274931172082 34.58088922111222 22.945748993817457 13 22.296931557493252 23.157848223853062 34.51252158735653 20.032698631297155 14 18.830312023988817 25.694937972022046 32.38625135477156 23.088498649217577 15 15.7826130183267 23.925357764022422 37.373283598027776 22.918745619623106 16 17.890840087245447 23.171227168340263 32.55821375134557 26.379718993068725 17 17.583492591869778 23.654587566419096 30.21824863479532 28.54367120691581 18 19.03516944003594 21.514692904126974 33.55746133914642 25.89267631669066 19 20.868084834782312 23.725410052374272 31.063945217518317 24.342559895325103 20 23.062231730683074 24.10014324062584 31.32784182896308 21.509783199728002 21 22.65546272122821 26.167006049983243 30.072921384585737 21.104609844202805 22 20.852496523315573 23.714731445306505 28.742882462904113 26.689889568473806 23 19.57744629090244 24.74945164738994 27.46316801131196 28.209934050395663 24 21.38446299494423 22.962810216603884 29.08337046297285 26.56935632547903 25 19.28482790872369 24.515504232778905 26.83202551082406 29.36764234767335 26 17.99001611610469 24.91527691346523 28.780809929386177 28.3138970410439 27 19.060208932470697 25.279945207698905 30.9063437063113 24.75350215351909 28 16.56804297955231 21.797737362727734 34.63698259387048 26.99723706384948 29 17.769693131200803 20.538152699171363 33.40047354098928 28.29168062863855 30 19.7319792368601 21.336102406614355 32.3917747722204 26.54014358430515 31 20.51237675107676 23.533563352984423 30.714865234751375 25.239194661187437 32 21.630561927942722 23.482625169845086 28.743987146393884 26.142825755818304 33 22.181921731947323 23.257024252712306 28.4390945032177 26.12195951212267 34 20.186986092034864 19.742903329147808 32.97296103044876 27.097149548368566 35 20.646902651608602 18.595259925888012 31.065172643618062 29.692664778885323 36 22.982203548979825 20.006554455372626 30.989317710653935 26.021924284993613 37 20.017601290270314 21.791477489619044 36.04643598420548 22.144485235905158 38 20.56871560905497 22.714379174015882 32.37176772679459 24.345137490134565 39 22.22623181414805 19.890194461116984 32.3569158709877 25.52665785374727 40 22.91567705437375 18.714197514953117 31.89969964883339 26.47042578183974 41 21.87396052352178 19.742903329147808 29.34738981702759 29.03574633030282 42 25.615400760758693 18.86467995478162 29.22489269227323 26.29502659218645 43 24.888028054050938 18.36057605561713 31.560070847034478 25.191325043297457 44 20.155195756051516 18.574884652632274 32.579816450701045 28.690103140615165 45 20.399453549900397 17.784054016567797 30.976552479216608 30.8399399543152 46 22.206715739162135 18.04463657754326 33.9254436838494 25.823203999445205 47 18.732363421229316 19.52393051295364 35.843174222088024 25.90053184372902 48 19.723141768941947 18.776428018210094 34.29698556424164 27.203444648606318 49 22.50019331961071 16.291135651450265 36.16500534544066 25.04366568349836 50 22.36640387473871 16.244370717050053 32.88139504340792 28.50783036480331 51 20.472117175005184 16.47696796295137 29.51112845873332 33.539786403310124 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 195.0 1 514.0 2 833.0 3 1460.0 4 2087.0 5 1483.5 6 880.0 7 974.0 8 1068.0 9 1133.0 10 1198.0 11 1307.0 12 1416.0 13 1427.5 14 1439.0 15 1454.5 16 1470.0 17 1454.0 18 1438.0 19 1537.0 20 1636.0 21 1848.5 22 2061.0 23 2296.5 24 2532.0 25 2768.0 26 3767.0 27 4530.0 28 5603.5 29 6677.0 30 7559.5 31 8442.0 32 9880.5 33 11319.0 34 13127.5 35 14936.0 36 16306.5 37 17677.0 38 20689.5 39 23702.0 40 28213.5 41 32725.0 42 39070.0 43 45415.0 44 55565.0 45 65715.0 46 80396.0 47 95077.0 48 109033.0 49 122989.0 50 112610.5 51 102232.0 52 83439.5 53 64647.0 54 53835.5 55 43024.0 56 37996.0 57 32968.0 58 29676.0 59 26384.0 60 23681.5 61 20979.0 62 18903.0 63 16827.0 64 14559.5 65 12292.0 66 10345.5 67 8399.0 68 6877.5 69 5356.0 70 4780.5 71 4205.0 72 3567.5 73 2930.0 74 2352.5 75 1400.5 76 1026.0 77 793.5 78 561.0 79 496.0 80 431.0 81 281.5 82 132.0 83 89.0 84 46.0 85 32.0 86 18.0 87 15.5 88 13.0 89 8.5 90 4.0 91 3.0 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 814713.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.45139565862019 #Duplication Level Percentage of deduplicated Percentage of total 1 70.83376530527332 28.653246663534542 2 12.457678219670191 10.078609413033082 3 4.9941824825100944 6.060649547740975 4 2.5770582198590275 4.169824067472678 5 1.7063723548019476 3.451257163251251 6 1.2478556215605323 3.028650088354711 7 0.896545492141275 2.5386561499991354 8 0.7012894011777306 2.269450803058977 9 0.5767058375353438 2.0995700411500318 >10 3.843290715119658 26.121304588882715 >50 0.10464111570602098 2.9591433892704537 >100 0.05359662852812329 3.9798067747972405 >500 0.0038283306091430277 1.1196473159991212 >1k 0.002552220406095352 2.080045578523955 >5k 6.38055101523838E-4 1.3901384149311358 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTGC 5725 0.7027014421029246 No Hit CTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTGCT 5047 0.6194819525403424 Illumina Single End Adapter 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTGC 3706 0.4548841125647928 No Hit GCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTGC 3165 0.38848036056869106 No Hit CCTGTATCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTGC 2017 0.2475718443181832 No Hit CTGTCACTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTGCT 1808 0.22191863883355245 Illumina Single End Adapter 2 (95% over 21bp) TCTGTATCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTGC 1649 0.20240256384763716 No Hit GCTGTATCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTGC 1395 0.1712259409141624 No Hit TCCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTG 1349 0.16557978085534414 No Hit CGCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTG 1029 0.12630214566356496 No Hit CCTGACTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTGC 919 0.11280045856639086 No Hit CTGTATCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTGCT 843 0.10347202020834331 Illumina Single End Adapter 2 (95% over 21bp) GCCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTG 843 0.10347202020834331 No Hit TCTGACTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTGC 835 0.10249007932854884 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6534816555032263 0.0 2 0.0 0.0 0.0 2.3247450329134307 0.0 3 0.0 0.0 0.0 3.159394780738739 0.0 4 0.0 0.0 0.0 4.054556635281381 0.0 5 1.2274260997430998E-4 0.0 0.0 5.4393387610115465 0.0 6 1.2274260997430998E-4 0.0 0.0 6.542058369020747 0.0 7 1.2274260997430998E-4 0.0 0.0 7.85528155313589 0.0 8 1.2274260997430998E-4 0.0 0.0 10.127124521150392 0.0 9 1.2274260997430998E-4 0.0 0.0 11.178046747750434 0.0 10 1.2274260997430998E-4 0.0 0.0 13.04042036889064 0.0 11 1.2274260997430998E-4 0.0 0.0 16.256890463267432 0.0 12 1.2274260997430998E-4 0.0 0.0 19.405238409108485 0.0 13 1.2274260997430998E-4 0.0 0.0 20.397735153360752 0.0 14 1.2274260997430998E-4 0.0 0.0 20.759825852784967 0.0 15 1.2274260997430998E-4 0.0 0.0 21.252514689221847 0.0 16 1.2274260997430998E-4 0.0 0.0 22.440785896383144 0.0 17 1.2274260997430998E-4 0.0 0.0 24.104930202414838 0.0 18 1.2274260997430998E-4 0.0 0.0 26.050155085287702 0.0 19 1.2274260997430998E-4 0.0 0.0 27.229220596700923 0.0 20 1.2274260997430998E-4 0.0 0.0 28.503166145624288 0.0 21 1.2274260997430998E-4 0.0 0.0 30.04162201904229 0.0 22 1.2274260997430998E-4 0.0 0.0 31.47218713829287 0.0 23 1.2274260997430998E-4 0.0 0.0 32.8499729352545 0.0 24 1.2274260997430998E-4 0.0 0.0 33.929985160418454 0.0 25 1.2274260997430998E-4 0.0 0.0 34.82551524279102 0.0 26 1.2274260997430998E-4 0.0 0.0 35.64887267049869 0.0 27 1.2274260997430998E-4 0.0 0.0 36.41441832890846 0.0 28 1.2274260997430998E-4 0.0 0.0 37.26441090298056 0.0 29 1.2274260997430998E-4 0.0 0.0 38.12090883538129 0.0 30 1.2274260997430998E-4 0.0 0.0 39.047983768517255 0.0 31 1.2274260997430998E-4 0.0 0.0 39.89539874777989 0.0 32 1.2274260997430998E-4 0.0 0.0 40.70549997361034 0.0 33 1.2274260997430998E-4 0.0 0.0 41.454475379673575 0.0 34 1.2274260997430998E-4 0.0 0.0 42.2876522161792 0.0 35 1.2274260997430998E-4 0.0 0.0 43.08376078447257 0.0 36 1.2274260997430998E-4 0.0 0.0 43.86845429003833 0.0 37 1.2274260997430998E-4 0.0 0.0 44.663703660061884 0.0 38 1.2274260997430998E-4 0.0 0.0 45.404946281696745 0.0 39 1.2274260997430998E-4 0.0 0.0 46.17847020975485 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGATAC 35 1.2113378E-7 45.000004 9 TCGCCGT 20 7.032077E-4 45.0 25 AACCGGT 20 7.032077E-4 45.0 28 GACACGC 20 7.032077E-4 45.0 10 ATTCGGA 20 7.032077E-4 45.0 12 ATTCGAA 40 6.8102963E-9 45.0 42 CGATTCG 55 1.8189894E-12 45.0 10 CGTTCAT 95 0.0 45.0 17 AATATCG 20 7.032077E-4 45.0 14 TATTGCG 25 3.8898015E-5 45.0 1 GTTACGT 20 7.032077E-4 45.0 45 ATATCGT 20 7.032077E-4 45.0 15 CCGTAGA 50 2.1827873E-11 45.0 41 TGATTCG 25 3.8898015E-5 45.0 15 ACCGTTA 25 3.8898015E-5 45.0 34 GCGTCGA 25 3.8898015E-5 45.0 32 GGTAGTC 20 7.032077E-4 45.0 8 CGGACTA 20 7.032077E-4 45.0 34 CGCGCAT 60 0.0 44.999996 36 GTCCCTA 30 2.164721E-6 44.999996 24 >>END_MODULE