##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934097.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 283256 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.080838534753013 31.0 30.0 31.0 26.0 34.0 2 30.303139209760783 31.0 30.0 33.0 26.0 34.0 3 30.444890840794194 31.0 30.0 34.0 26.0 34.0 4 34.03419168525998 35.0 33.0 37.0 30.0 37.0 5 34.443429265399494 35.0 35.0 37.0 32.0 37.0 6 33.96582949699212 35.0 35.0 37.0 30.0 37.0 7 34.14554325415878 35.0 35.0 37.0 31.0 37.0 8 34.30476318242155 35.0 35.0 37.0 31.0 37.0 9 35.69925085435084 37.0 35.0 39.0 30.0 39.0 10 35.34441635834722 37.0 34.0 39.0 30.0 39.0 11 35.52249908210241 37.0 35.0 39.0 30.0 39.0 12 35.52886081848222 37.0 35.0 39.0 30.0 39.0 13 35.4888899087751 37.0 35.0 39.0 30.0 39.0 14 36.30779930522213 38.0 35.0 40.0 30.0 41.0 15 36.654136187759484 38.0 35.0 40.0 31.0 41.0 16 36.78307608664953 38.0 35.0 40.0 31.0 41.0 17 36.54547829525235 38.0 35.0 40.0 31.0 41.0 18 36.6515413618776 38.0 35.0 40.0 31.0 41.0 19 36.62657454740588 38.0 35.0 40.0 31.0 41.0 20 36.59382678566385 38.0 35.0 40.0 31.0 41.0 21 36.330852656254415 38.0 35.0 40.0 30.0 41.0 22 36.48985017087017 38.0 35.0 40.0 30.0 41.0 23 36.50416231253707 38.0 35.0 40.0 30.0 41.0 24 36.44652893495636 38.0 35.0 40.0 30.0 41.0 25 35.99490213799531 38.0 34.0 40.0 29.0 41.0 26 36.08253311492078 38.0 34.0 40.0 30.0 41.0 27 36.05061146101053 38.0 34.0 40.0 30.0 41.0 28 35.93042336261191 38.0 34.0 40.0 29.0 41.0 29 36.052348405682494 38.0 34.0 40.0 30.0 41.0 30 35.66533453836812 38.0 34.0 40.0 29.0 41.0 31 35.81171802186008 38.0 34.0 40.0 29.0 41.0 32 35.79545711300025 38.0 34.0 40.0 29.0 41.0 33 35.835915214505604 38.0 34.0 40.0 29.0 41.0 34 35.77873019459429 38.0 34.0 40.0 29.0 41.0 35 35.78194989691304 38.0 34.0 40.0 29.0 41.0 36 35.59439517609512 38.0 34.0 40.0 28.0 41.0 37 35.61250953201344 38.0 34.0 40.0 29.0 41.0 38 35.563560877792526 38.0 34.0 40.0 28.0 41.0 39 35.4974899031265 38.0 34.0 40.0 28.0 41.0 40 35.34985666676081 38.0 34.0 40.0 27.0 41.0 41 35.20897350806338 37.0 34.0 40.0 27.0 41.0 42 35.355328748552544 38.0 34.0 40.0 28.0 41.0 43 35.34139082667269 38.0 34.0 40.0 28.0 41.0 44 35.32326941000367 37.0 34.0 40.0 28.0 41.0 45 35.38854605021606 38.0 34.0 40.0 28.0 41.0 46 35.30925381986613 37.0 34.0 40.0 28.0 41.0 47 35.235451323184684 37.0 34.0 40.0 28.0 41.0 48 35.1880383822408 37.0 34.0 40.0 28.0 41.0 49 35.16134168384783 37.0 34.0 40.0 28.0 41.0 50 34.995223402152114 37.0 34.0 40.0 27.0 41.0 51 33.89459358318977 36.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 9.0 11 7.0 12 18.0 13 16.0 14 13.0 15 28.0 16 34.0 17 75.0 18 176.0 19 274.0 20 496.0 21 832.0 22 1240.0 23 1676.0 24 2185.0 25 2693.0 26 3321.0 27 4077.0 28 4993.0 29 6380.0 30 8209.0 31 10263.0 32 13381.0 33 18101.0 34 25724.0 35 26534.0 36 31535.0 37 40487.0 38 51539.0 39 28938.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.805631654757534 5.272615584488943 50.79045104075466 18.13130171999887 2 19.93567656113198 6.1093145423221396 53.437526477815126 20.517482418730758 3 22.289377806648403 5.360168893156721 50.011297201118424 22.339156099076455 4 19.83153048832152 5.459019402942921 48.16526393086113 26.54418617787443 5 19.618648854746237 6.017524783234954 48.08441833535741 26.279408026661393 6 22.217005111983507 8.214477363233259 51.831911768859264 17.73660575592397 7 85.03473889343915 2.94856949190838 8.246250741378823 3.7704408732736465 8 86.26931115316181 4.931581325726551 4.901573135255741 3.897534385855904 9 80.77710622193351 6.249470443697573 6.838690089530319 6.134733244838591 10 42.1618606490242 30.47843646736521 13.959104131951309 13.400598751659276 11 34.10589713898381 26.3309515067642 21.689920072302087 17.8732312819499 12 31.644519445307424 21.67721072104386 26.851681870816506 19.82658796283221 13 27.064563504391785 24.11634705001836 27.308865478577683 21.510223967012173 14 19.74750755500325 28.76267404750473 27.424661790041515 24.065156607450504 15 18.67250826107832 25.810221142711892 34.37738300336092 21.139887592848872 16 21.449854548535598 22.85141356228994 33.4799615895162 22.21877029965826 17 20.923475583924084 23.83109272177818 28.914127149998585 26.33130454429915 18 21.99706272770921 24.464795097014715 28.529669274437257 25.008472900838818 19 25.687011043014092 27.01196091168413 25.570155618945407 21.73087242635637 20 30.904552772050724 23.592792385686444 26.232454034512948 19.27020080774988 21 27.596238032027564 25.96096817013585 25.031773378145566 21.41102041969102 22 24.923037817380745 24.44679018273223 26.265286525263363 24.364885474623662 23 25.428234529895217 26.812494704436972 26.227158471488686 21.532112294179118 24 24.233202474087044 24.54846499279803 28.235589007823314 22.98274352529161 25 24.154475103793036 26.841090744767982 25.600869884486116 23.403564266952863 26 22.869065439037477 28.5271980116926 25.923546191431075 22.680190357838846 27 23.82650323382382 28.705128929307765 26.419916965571776 21.048450871296637 28 22.375518965176376 29.088174654729293 27.655548337899283 20.880758042195048 29 23.265173553252183 26.780721326291413 27.417954076877454 22.536151043578954 30 24.055271556471883 27.111517496540234 25.34491767164685 23.488293275341036 31 23.198096421611545 28.32420142909594 24.449967520546785 24.02773462874573 32 25.325853644759512 28.913421074928685 23.937003982263395 21.823721298048408 33 25.34068122122744 28.692772615584488 24.165066229841557 21.801479933346513 34 23.523950066371057 28.30478436467365 25.33926907108764 22.831996497867653 35 24.23214336148219 26.3330697319739 24.99541051204564 24.439376394498264 36 23.140904340949533 29.125243595899114 24.09692998559607 23.636922077555287 37 24.00019770101957 29.277755810997824 25.3689242240235 21.353122263959104 38 23.326602084333604 27.398537012455165 24.379360013556642 24.89550088965459 39 23.305419832236563 27.579998305419835 25.402815827378767 23.71176603496484 40 24.928333380405004 25.306789617872173 27.80558929025334 21.959287711469482 41 19.33904312706527 27.593060694213005 28.02906204987714 25.038834128844577 42 23.12184031406219 27.659431750783742 25.50590278758438 23.71282514756969 43 23.163145705651424 27.718035981585565 25.420467704126303 23.69835060863671 44 23.066060383539977 27.390417149151297 26.68257689157511 22.860945575733613 45 22.911076905696614 27.141172649476093 24.243087525065665 25.704662919761628 46 21.941282797186997 29.66256672409411 25.052602592707657 23.34354788601124 47 21.990708052080095 28.967788855311095 26.70234699353235 22.339156099076455 48 22.5100262659926 26.088061682718106 27.267560086988446 24.134351964300844 49 21.013853192871466 26.649744400824694 27.542576326715057 24.793826079588783 50 20.19233484904115 27.85607365775129 26.758126924054565 25.19346456915299 51 20.239994916259498 27.81759256644166 25.96802892083486 25.974383596463973 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 33.0 1 177.0 2 321.0 3 425.5 4 530.0 5 428.5 6 327.0 7 346.5 8 366.0 9 367.0 10 368.0 11 385.0 12 402.0 13 434.0 14 466.0 15 465.5 16 465.0 17 466.5 18 468.0 19 498.5 20 529.0 21 642.0 22 755.0 23 917.5 24 1080.0 25 1394.0 26 2446.5 27 3185.0 28 3488.0 29 3791.0 30 4423.5 31 5056.0 32 5814.0 33 6572.0 34 7073.0 35 7574.0 36 8896.0 37 10218.0 38 10478.0 39 10738.0 40 13100.0 41 15462.0 42 16020.0 43 16578.0 44 17949.5 45 19321.0 46 20090.5 47 20860.0 48 20789.0 49 20718.0 50 20592.0 51 20466.0 52 19285.0 53 18104.0 54 16933.5 55 15763.0 56 15910.5 57 16058.0 58 16094.0 59 16130.0 60 15720.5 61 15311.0 62 13610.5 63 11910.0 64 9835.5 65 7761.0 66 6411.0 67 5061.0 68 4228.5 69 3396.0 70 2776.5 71 2157.0 72 1809.5 73 1462.0 74 1130.5 75 666.0 76 533.0 77 409.5 78 286.0 79 191.0 80 96.0 81 68.5 82 41.0 83 28.5 84 16.0 85 15.0 86 14.0 87 7.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 283256.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.838068743468806 #Duplication Level Percentage of deduplicated Percentage of total 1 75.6648447110446 21.063631485299517 2 7.455645314699503 4.151015335950518 3 2.343601384855364 1.9572400937667693 4 1.29100985377855 1.4375688423193154 5 0.8649005110775747 1.2038579941819414 6 0.7203276983754581 1.20315191911204 7 0.618873092970464 1.2059762193916457 8 0.6239458232407138 1.389555737566018 9 0.5377094086464688 1.347191233371932 >10 9.612823862123191 58.29108650831757 >50 0.21685921905317487 3.922953088372356 >100 0.0481909375673722 2.6234219222187702 >500 0.0012681825675624264 0.2033496201316124 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 576 0.2033496201316124 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCAGAACTCGTATGC 470 0.1659276414268365 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCAGAACTCGTATGCCG 469 0.16557460389188577 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 408 0.1440393142598921 No Hit CCTGTCTCTTATACACATCTGACGCAGCAGAACTCGTATGCCGTCTTCTGC 375 0.1323890756065185 Illumina PCR Primer Index 9 (95% over 24bp) CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 352 0.12426921230265203 No Hit GGTTCTGGAGGAGCTACTCTAGTATTAATAAATATTAGCCCACCAACAGCT 328 0.11579631146383484 No Hit GCTGTCTCTTATACACATCTGACGCAGCAGAACTCGTATGCCGTCTTCTGC 322 0.11367808625413053 Illumina PCR Primer Index 9 (95% over 24bp) GAATCTGTCTCTTATACACATCTGACGCAGCAGAACTCGTATGCCGTCTTC 288 0.1016748100658062 Illumina PCR Primer Index 9 (95% over 21bp) CTGTCTCTTATACACATCTGACGCAGCAGAACTCGTATGCCGTCTTCTGCT 284 0.10026265992600332 Illumina PCR Primer Index 9 (96% over 25bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12356313723275059 0.0 2 0.0 0.0 0.0 0.5352049029852854 0.0 3 0.0 0.0 0.0 0.6866580054791426 0.0 4 0.0 0.0 0.0 0.9111898777077979 0.0 5 0.0 0.0 0.0 1.3627248849097635 0.0 6 0.0 0.0 0.0 1.5787838562996017 0.0 7 0.0 0.0 0.0 1.7906063772700314 0.0 8 0.0 0.0 0.0 2.1041037083062673 0.0 9 0.0 0.0 0.0 2.2191939447002005 0.0 10 0.0 0.0 0.0 2.6530770751546306 0.0 11 0.0 0.0 0.0 3.137091535572062 0.0 12 0.0 0.0 0.0 3.8053915892337673 0.0 13 0.0 0.0 0.0 4.000621346061513 0.0 14 0.0 0.0 0.0 4.095941480498206 0.0 15 0.0 0.0 0.0 4.237862569548394 0.0 16 0.0 0.0 0.0 4.487813144293502 0.0 17 0.0 0.0 0.0 4.82743525291609 0.0 18 0.0 0.0 0.0 5.186474425960968 0.0 19 0.0 0.0 0.0 5.4978535317874995 0.0 20 0.0 0.0 0.0 5.743214618578247 0.0 21 0.0 0.0 0.0 6.093074815714407 0.0 22 0.0 0.0 0.0 6.456350439178694 0.0 23 0.0 0.0 0.0 6.81962606264298 0.0 24 0.0 0.0 0.0 7.097113565114243 0.0 25 0.0 0.0 0.0 7.369305504561245 0.0 26 0.0 0.0 0.0 7.6224334171209085 0.0 27 0.0 0.0 0.0 7.8575564153980855 0.0 28 0.0 0.0 0.0 8.104682689863587 0.0 29 0.0 0.0 0.0 8.393467393453271 0.0 30 0.0 0.0 0.0 8.702728274070099 0.0 31 0.0 0.0 0.0 8.991866015194736 0.0 32 0.0 0.0 0.0 9.311718021860084 0.0 33 0.0 0.0 0.0 9.586381224051742 0.0 34 0.0 0.0 0.0 9.88152060327054 0.0 35 0.0 0.0 0.0 10.19219363402717 0.0 36 0.0 0.0 0.0 10.512045640692518 0.0 37 0.0 0.0 0.0 10.865436213178185 0.0 38 0.0 0.0 0.0 11.183169994633829 0.0 39 0.0 0.0 0.0 11.487488349761346 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCATAAG 20 7.024278E-4 45.0 30 CGGGTTC 20 7.024278E-4 45.0 6 CGGGTAC 40 6.7830115E-9 45.0 6 GGTACCT 40 6.7830115E-9 45.0 8 CCCTCGT 20 7.024278E-4 45.0 14 CGCGGAA 25 3.883339E-5 45.0 41 GCGCGAC 20 7.024278E-4 45.0 9 GGCGTGA 20 7.024278E-4 45.0 16 TCGGGTT 20 7.024278E-4 45.0 5 CGCGACC 20 7.024278E-4 45.0 10 TCGATCA 20 7.024278E-4 45.0 17 ACGGGTA 20 7.024278E-4 45.0 5 AGACGAG 20 7.024278E-4 45.0 24 TATCTCG 20 7.024278E-4 45.0 1 AGCATAA 20 7.024278E-4 45.0 29 GCTAGTC 25 3.883339E-5 45.0 27 CTCGATC 20 7.024278E-4 45.0 16 GCGTGAT 20 7.024278E-4 45.0 17 GGCGCAT 20 7.024278E-4 45.0 18 GCTACGA 70 0.0 45.0 10 >>END_MODULE