##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934096.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 546747 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.019336182914582 31.0 30.0 31.0 26.0 34.0 2 30.022953943963113 31.0 30.0 33.0 25.0 34.0 3 30.109156520291837 31.0 30.0 34.0 25.0 34.0 4 33.9841133101782 35.0 33.0 37.0 28.0 37.0 5 34.48155728335043 35.0 35.0 37.0 32.0 37.0 6 33.81121798564967 35.0 35.0 37.0 29.0 37.0 7 34.45935871618866 35.0 35.0 37.0 32.0 37.0 8 34.39376164844069 35.0 35.0 37.0 31.0 37.0 9 35.96237930889424 37.0 35.0 39.0 31.0 39.0 10 35.33995431159202 37.0 34.0 39.0 30.0 39.0 11 35.46702222417316 37.0 35.0 39.0 30.0 39.0 12 35.618900515229164 37.0 35.0 39.0 30.0 39.0 13 35.64245254203498 37.0 35.0 39.0 30.0 39.0 14 36.421070440258475 38.0 35.0 40.0 30.0 41.0 15 36.622796284204576 38.0 35.0 40.0 31.0 41.0 16 36.841850069593434 38.0 35.0 40.0 31.0 41.0 17 36.465758385505545 38.0 35.0 40.0 30.0 41.0 18 36.62875150663835 38.0 35.0 40.0 31.0 41.0 19 36.620822793723605 38.0 35.0 40.0 30.0 41.0 20 36.532959485831654 38.0 35.0 40.0 30.0 41.0 21 36.37050043255839 38.0 35.0 40.0 30.0 41.0 22 36.54358231503785 38.0 35.0 40.0 30.0 41.0 23 36.47373282340827 38.0 35.0 40.0 30.0 41.0 24 36.42834437134543 38.0 35.0 40.0 30.0 41.0 25 36.0625536125484 38.0 34.0 40.0 30.0 41.0 26 36.157304932628804 38.0 34.0 40.0 30.0 41.0 27 36.111557996660245 38.0 34.0 40.0 30.0 41.0 28 35.999454958143346 38.0 34.0 40.0 29.0 41.0 29 36.16336440803516 38.0 35.0 40.0 30.0 41.0 30 35.739696788459746 38.0 34.0 40.0 29.0 41.0 31 35.97135238053433 38.0 34.0 40.0 30.0 41.0 32 35.87849407495606 38.0 34.0 40.0 29.0 41.0 33 35.86849676358535 38.0 34.0 40.0 29.0 41.0 34 35.806118734990775 38.0 34.0 40.0 29.0 41.0 35 35.87633036852511 38.0 35.0 40.0 29.0 41.0 36 35.58287836970299 38.0 34.0 40.0 27.0 41.0 37 35.67191955328516 38.0 34.0 40.0 28.0 41.0 38 35.683252034304715 38.0 34.0 40.0 28.0 41.0 39 35.5461703493572 38.0 34.0 40.0 28.0 41.0 40 35.48956281424498 38.0 34.0 40.0 27.0 41.0 41 35.29833542753778 38.0 34.0 40.0 27.0 41.0 42 35.46199613349501 38.0 34.0 40.0 28.0 41.0 43 35.4309634986566 38.0 34.0 40.0 28.0 41.0 44 35.50489714621205 38.0 34.0 40.0 28.0 41.0 45 35.5208752860098 38.0 34.0 40.0 28.0 41.0 46 35.4351958035435 38.0 34.0 40.0 28.0 41.0 47 35.323625003886626 38.0 34.0 40.0 27.0 41.0 48 35.31074153127498 38.0 34.0 40.0 27.0 41.0 49 35.35623972330895 38.0 34.0 40.0 28.0 41.0 50 35.15647090884815 38.0 34.0 40.0 27.0 41.0 51 34.15354999661635 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 6.0 12 9.0 13 13.0 14 17.0 15 24.0 16 47.0 17 92.0 18 235.0 19 531.0 20 1231.0 21 1959.0 22 3013.0 23 3970.0 24 4832.0 25 5227.0 26 5942.0 27 7275.0 28 9061.0 29 11584.0 30 15272.0 31 19837.0 32 25159.0 33 33327.0 34 44673.0 35 49462.0 36 61476.0 37 80369.0 38 104020.0 39 58078.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.434626984693107 4.210905592531829 52.3443201334438 16.010147289331265 2 18.95666551439697 9.101833206217867 52.106915995881096 19.83458528350407 3 20.436509025198127 9.127987899339182 50.69328226766676 19.742220807795928 4 18.893565030992395 4.380819647844433 51.33654139848961 25.38907392267356 5 21.916901235854976 5.5500990403239525 48.64443700651307 23.888562717308005 6 21.141954139666062 10.974362913742555 51.283866212343185 16.5998167342482 7 83.4545045514653 1.7746782332596245 11.645971537109485 3.1248456781655864 8 85.39836524022995 6.565742473209729 4.6961391649154 3.339753121644929 9 80.58187790696611 4.851055424172424 5.795367875818249 8.771698793043218 10 39.11608111247067 36.21986037417672 12.635094476970151 12.028964036382458 11 27.64496192937501 24.83708186784747 29.741909877877703 17.776046324899816 12 24.57297433730775 22.666425238730163 30.648727839384577 22.11187258457751 13 25.0662555075748 23.014849647094543 33.345221830206654 18.573673015123997 14 20.229649179602266 28.55177989088189 30.135327674408824 21.083243255107025 15 17.43420631480374 26.19291921126225 34.390129255396005 21.982745218538007 16 20.428461427314645 25.518201288713062 30.783159304029102 23.270177979943192 17 20.90455000210335 26.64047539355497 30.957462958187243 21.49751164615444 18 20.451141021349912 24.37160149026881 31.065373929806654 24.111883558574622 19 21.834596257501186 25.998862362299196 29.713926185237415 22.452615194962203 20 26.839836341123043 25.72707303377979 30.06454539302456 17.368545232072606 21 24.99272972691208 28.255299068856342 28.24597117130958 18.50600003292199 22 22.44456759707872 23.716270962620737 31.70479216163966 22.134369278660877 23 22.631491347917777 27.240387235778158 29.25009190722583 20.87802950907824 24 21.18749622768849 27.181493451267226 30.0211981044249 21.609812216619385 25 20.20824988523028 30.05704649499677 28.517211799973296 21.21749181979965 26 19.883602470612548 27.90175346183884 30.725180019277655 21.489464048270957 27 22.741780018911857 27.81670498420659 28.756627837006874 20.684887159874677 28 18.40394185976329 29.208756518097033 31.624864882660535 20.76243673947914 29 19.994256941510425 25.17050848015627 32.73982298942656 22.095411588906753 30 21.775336673086453 28.278344462795406 29.71831578408295 20.22800308003519 31 21.71863768799829 26.571156311785888 27.314095916392773 24.396110083823046 32 22.93473946816352 27.967597444521875 28.225120576793287 20.87254251052132 33 23.609091590808912 26.376002063111457 27.40408269272625 22.61082365335338 34 20.74176904491474 26.91811752053509 29.03628186345787 23.303831571092296 35 22.986865954454256 24.794831978959188 29.796048263639307 22.42225380294725 36 20.819135724567303 27.98003464125089 29.110905043831973 22.08992459034983 37 20.761156439815856 26.94390641375261 28.735228542634893 23.559708603796636 38 20.550272795278254 26.36082136710398 27.736594805275566 25.3523110323422 39 20.339389150740654 27.899741562367968 28.3807684358579 23.380100851033475 40 22.052430100210884 24.818791872657737 30.07058109143717 23.058196935694205 41 18.987392706315717 26.94134581442605 30.148862270849225 23.922399208409008 42 20.534543399415085 25.508690491214402 30.990019149624963 22.96674695974555 43 21.118542945823204 26.43105494863255 29.71758418427536 22.732817921268886 44 21.635052409981217 25.841202603763712 29.78617166623685 22.737573320018218 45 21.030750968912496 24.856469262748586 28.805462124163462 25.30731764417546 46 22.355861120408527 26.630964596056312 28.40948372830578 22.603690555229385 47 19.498598071868706 27.434626984693107 31.061167230913018 22.005607712525173 48 20.161061697640772 26.87477023193543 30.054302995718313 22.909865074705486 49 20.218675182488425 24.446590470546706 31.240957883628077 24.09377646333679 50 20.126310706780284 25.51710388900168 30.137156673927795 24.219428730290243 51 19.964992949206856 24.725512897190107 29.787269065948234 25.522225087654803 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 45.0 1 258.0 2 471.0 3 733.0 4 995.0 5 805.0 6 615.0 7 632.0 8 649.0 9 670.0 10 691.0 11 716.0 12 741.0 13 775.5 14 810.0 15 845.0 16 880.0 17 1032.5 18 1185.0 19 1508.0 20 1831.0 21 2170.0 22 2509.0 23 2623.5 24 2738.0 25 4074.0 26 6622.0 27 7834.0 28 9529.5 29 11225.0 30 12507.5 31 13790.0 32 15245.5 33 16701.0 34 19060.0 35 21419.0 36 22842.0 37 24265.0 38 25398.0 39 26531.0 40 28991.0 41 31451.0 42 32965.5 43 34480.0 44 36007.0 45 37534.0 46 46259.5 47 54985.0 48 51124.5 49 47264.0 50 45220.0 51 43176.0 52 39251.5 53 35327.0 54 31846.0 55 28365.0 56 26111.0 57 23857.0 58 22129.0 59 20401.0 60 19086.5 61 17772.0 62 14510.0 63 11248.0 64 9463.5 65 7679.0 66 6006.5 67 4334.0 68 3609.0 69 2884.0 70 2312.5 71 1741.0 72 1579.5 73 1418.0 74 1086.5 75 577.5 76 400.0 77 285.0 78 170.0 79 129.0 80 88.0 81 69.5 82 51.0 83 36.5 84 22.0 85 16.0 86 10.0 87 5.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 546747.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.546500544261413 #Duplication Level Percentage of deduplicated Percentage of total 1 74.10487517668426 21.895397347403254 2 8.71835291571835 5.151936383386706 3 2.9138823478181175 2.5828507912716514 4 1.5281573012855378 1.8060680213660074 5 1.008169401596135 1.4893938886483953 6 0.7977064117237612 1.4141659756894158 7 0.6725817448310631 1.3910705822797906 8 0.6027987226543124 1.424847422958858 9 0.5574111322286351 1.4822593489593665 >10 8.9259553475061 53.570008927054324 >50 0.11989267198955951 2.3500451910469553 >100 0.0426843020695814 2.0447674399252374 >500 0.004393972271868673 0.9073017973799783 >1k 0.003138551622763338 2.4898868826300506 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCCGATTTCGTATGC 4222 0.772203596910454 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGCCGATTTCGTATGCCG 3821 0.6988607161996316 No Hit GAATCTGTCTCTTATACACATCTGACGCTGCCGATTTCGTATGCCGTCTTC 2476 0.4528602808977461 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGCCGATTT 1850 0.3383649110100284 No Hit GCTGTCTCTTATACACATCTGACGCTGCCGATTTCGTATGCCGTCTTCTGC 1056 0.19314234920356216 Illumina Paired End PCR Primer 2 (95% over 24bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGCCGATTTCGTA 838 0.153270159689948 No Hit CCTGTCTCTTATACACATCTGACGCTGCCGATTTCGTATGCCGTCTTCTGC 772 0.14119876286472535 Illumina Paired End PCR Primer 2 (95% over 24bp) GAATGATCTGTCTCTTATACACATCTGACGCTGCCGATTTCGTATGCCGTC 749 0.13699206397108718 No Hit GAACTGTCTCTTATACACATCTGACGCTGCCGATTTCGTATGCCGTCTTCT 690 0.12620096680914572 Illumina Paired End PCR Primer 2 (95% over 22bp) CTGTCTCTTATACACATCTGACGCTGCCGATTTCGTATGCCGTCTTCTGCT 663 0.12126266810791829 TruSeq Adapter, Index 1 (95% over 24bp) GAATGACTGTCTCTTATACACATCTGACGCTGCCGATTTCGTATGCCGTCT 656 0.1199823684446371 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1331511649812436 0.0 2 0.0 0.0 0.0 0.6205795367875818 0.0 3 0.0 0.0 0.0 0.7895790923406987 0.0 4 0.0 0.0 0.0 1.1795217897857693 0.0 5 0.0 0.0 0.0 2.099142747925457 0.0 6 0.0 0.0 0.0 2.348801182265289 0.0 7 0.0 0.0 0.0 2.707467987935919 0.0 8 0.0 0.0 0.0 3.2259893515648006 0.0 9 0.0 0.0 0.0 3.3863926093787438 0.0 10 0.0 0.0 0.0 4.535553007149559 0.0 11 0.0 0.0 0.0 5.270262113921064 0.0 12 0.0 0.0 0.0 6.909594382776677 0.0 13 0.0 0.0 0.0 7.173701913316397 0.0 14 0.0 0.0 0.0 7.285453783925655 0.0 15 0.0 0.0 0.0 7.58522680508535 0.0 16 0.0 0.0 0.0 7.928347114844708 0.0 17 0.0 0.0 0.0 8.40187509030685 0.0 18 0.0 0.0 0.0 8.879975564566427 0.0 19 0.0 0.0 0.0 9.679979954165272 0.0 20 0.0 0.0 0.0 10.087663946944382 0.0 21 0.0 0.0 0.0 10.592284914229067 0.0 22 1.8289995189731264E-4 0.0 0.0 11.191282256692766 0.0 23 1.8289995189731264E-4 0.0 0.0 11.77765950247555 0.0 24 1.8289995189731264E-4 0.0 0.0 12.234909382218833 0.0 25 1.8289995189731264E-4 0.0 0.0 12.644422374516916 0.0 26 1.8289995189731264E-4 0.0 0.0 13.0061984793698 0.0 27 1.8289995189731264E-4 0.0 0.0 13.375290582298577 0.0 28 1.8289995189731264E-4 0.0 0.0 13.769074178733492 0.0 29 1.8289995189731264E-4 0.0 0.0 14.207119563527554 0.0 30 1.8289995189731264E-4 0.0 0.0 14.685037137835232 0.0 31 1.8289995189731264E-4 0.0 0.0 15.160028312912553 0.0 32 1.8289995189731264E-4 0.0 0.0 15.600451397081283 0.0 33 1.8289995189731264E-4 0.0 0.0 16.05477487759421 0.0 34 1.8289995189731264E-4 0.0 0.0 16.490991262869297 0.0 35 1.8289995189731264E-4 0.0 0.0 16.9807973340503 0.0 36 1.8289995189731264E-4 0.0 0.0 17.47224950479838 0.0 37 1.8289995189731264E-4 0.0 0.0 17.937912782328937 0.0 38 3.657999037946253E-4 0.0 0.0 18.422963454760612 0.0 39 3.657999037946253E-4 0.0 0.0 18.927950221949093 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGATCG 100 0.0 45.000004 40 TGTTCCG 35 1.2103737E-7 45.000004 1 CGATCGA 100 0.0 45.000004 41 CGACGGT 20 7.030038E-4 45.0 28 CGTTGAT 20 7.030038E-4 45.0 25 CACGCTA 20 7.030038E-4 45.0 14 CGGTCTA 20 7.030038E-4 45.0 31 ACCCGTT 20 7.030038E-4 45.0 10 TCGCGGA 20 7.030038E-4 45.0 3 ACGACGG 20 7.030038E-4 45.0 27 TGCGACC 30 2.163406E-6 44.999996 32 TTTCGCG 155 0.0 42.096775 1 CGATGAA 1145 0.0 41.65939 19 TCGGCGT 65 0.0 41.53846 4 ACCCCCG 170 0.0 41.02941 36 GGCCGAT 160 0.0 40.78125 8 CCGATCA 50 1.0786607E-9 40.500004 40 CCGATGA 1170 0.0 40.384617 18 ACGGGAT 45 1.9250365E-8 40.0 5 GTGCTCG 45 1.9250365E-8 40.0 1 >>END_MODULE