SRR2934092.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934092.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	348608
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGC	2986	0.8565494767762071	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCG	2462	0.7062373783734166	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTC	1807	0.5183472553699284	No Hit
GCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTGC	1091	0.31295896823939784	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCTCCTATT	1050	0.3011979071048283	No Hit
CCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTGC	887	0.25444051771617404	No Hit
CTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTGCT	635	0.18215302001101524	No Hit
TCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTGC	628	0.1801450339636497	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCTCCTATTCGTA	598	0.17153937947494033	No Hit
AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC	490	0.14055902331558656	No Hit
GAACTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCT	458	0.1313796585276299	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	454	0.1302322379291353	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTC	450	0.12908481733064073	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCT	392	0.11244721865246925	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCGATCA	35	1.2086639E-7	45.000004	40
CTTCTCG	65	0.0	45.000004	1
ATAGTTG	35	1.2086639E-7	45.000004	17
CGGTAGT	35	1.2086639E-7	45.000004	12
CGGAAAC	40	6.7921064E-9	45.0	22
CTCACTA	20	7.0265174E-4	45.0	45
CGGCGAA	25	3.8851955E-5	45.0	31
CCGATCG	45	3.8380676E-10	45.0	40
GATCCGT	20	7.0265174E-4	45.0	27
TACGGGT	20	7.0265174E-4	45.0	4
TAACGAA	20	7.0265174E-4	45.0	19
ATCCGTC	20	7.0265174E-4	45.0	28
CGGGACC	90	0.0	45.0	6
TCATCGA	20	7.0265174E-4	45.0	16
TACTAAC	20	7.0265174E-4	45.0	13
CGATCGA	45	3.8380676E-10	45.0	41
TCGACAA	20	7.0265174E-4	45.0	19
CCGTTTG	20	7.0265174E-4	45.0	1
CGTGGCA	30	2.1611359E-6	44.999996	15
GGCACGT	30	2.1611359E-6	44.999996	11