##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934091.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 285321 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.649489522327485 31.0 28.0 31.0 25.0 33.0 2 29.012252866070146 31.0 28.0 33.0 16.0 34.0 3 29.18514935809141 31.0 28.0 33.0 16.0 34.0 4 33.58538628422023 35.0 32.0 37.0 28.0 37.0 5 34.321367862863234 35.0 35.0 37.0 32.0 37.0 6 33.31309297247662 35.0 33.0 37.0 28.0 37.0 7 34.295901808839865 35.0 35.0 36.0 32.0 37.0 8 33.624349416972464 35.0 35.0 37.0 28.0 37.0 9 35.635603408091235 37.0 34.0 39.0 31.0 39.0 10 35.14998895980317 37.0 34.0 39.0 30.0 39.0 11 35.300181199421004 37.0 34.0 39.0 30.0 39.0 12 35.303447695753206 37.0 34.0 39.0 30.0 39.0 13 35.16297433417099 37.0 34.0 39.0 29.0 39.0 14 35.96276825049681 38.0 34.0 40.0 28.0 41.0 15 36.16633896558613 38.0 34.0 40.0 30.0 41.0 16 36.488109883254296 38.0 35.0 40.0 31.0 41.0 17 35.99702440409223 38.0 34.0 40.0 30.0 41.0 18 36.237637608167645 38.0 35.0 40.0 30.0 41.0 19 36.0953136993071 38.0 34.0 40.0 30.0 41.0 20 35.74677293294219 38.0 34.0 40.0 27.0 41.0 21 35.783549055274584 38.0 34.0 40.0 29.0 41.0 22 35.99006382285216 38.0 34.0 40.0 30.0 41.0 23 35.683819277235116 38.0 34.0 40.0 27.0 41.0 24 35.74196781870244 38.0 34.0 40.0 28.0 41.0 25 35.559268332860185 38.0 34.0 40.0 28.0 41.0 26 35.6360730545596 38.0 34.0 40.0 29.0 41.0 27 35.26811205624542 38.0 34.0 40.0 27.0 41.0 28 35.15235822109133 38.0 33.0 40.0 27.0 41.0 29 35.33863613263657 38.0 34.0 40.0 27.0 41.0 30 34.96191657816985 37.0 33.0 40.0 25.0 41.0 31 35.17164176488937 37.0 34.0 40.0 27.0 41.0 32 34.84755766312329 38.0 33.0 40.0 25.0 41.0 33 34.71918646016241 38.0 33.0 40.0 24.0 41.0 34 34.626543437041086 38.0 33.0 40.0 24.0 41.0 35 34.72257913017268 38.0 33.0 40.0 24.0 41.0 36 34.25837214926346 37.0 33.0 40.0 23.0 41.0 37 34.17571787565584 37.0 33.0 40.0 23.0 41.0 38 34.13050564101486 37.0 33.0 40.0 22.0 41.0 39 34.185745178237845 37.0 33.0 40.0 23.0 41.0 40 34.31932104541902 37.0 33.0 40.0 23.0 41.0 41 34.40638088328584 37.0 33.0 40.0 24.0 41.0 42 34.026510491691816 37.0 33.0 40.0 22.0 41.0 43 33.89037259788098 37.0 33.0 40.0 21.0 41.0 44 34.08278745693447 37.0 33.0 40.0 22.0 41.0 45 34.006624118098564 37.0 33.0 40.0 22.0 41.0 46 34.05387966535937 37.0 33.0 40.0 22.0 41.0 47 33.76567795570603 37.0 33.0 40.0 21.0 41.0 48 33.80050189085276 37.0 33.0 40.0 22.0 41.0 49 33.8340675940432 37.0 33.0 40.0 22.0 41.0 50 33.58226348568805 36.0 33.0 40.0 20.0 41.0 51 32.67563200745827 36.0 31.0 39.0 17.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 2.0 11 9.0 12 6.0 13 6.0 14 13.0 15 21.0 16 38.0 17 66.0 18 190.0 19 549.0 20 1406.0 21 2621.0 22 3694.0 23 4283.0 24 4779.0 25 4426.0 26 4370.0 27 4448.0 28 5540.0 29 7026.0 30 9019.0 31 11668.0 32 14425.0 33 18533.0 34 24954.0 35 26156.0 36 30401.0 37 38086.0 38 45590.0 39 22994.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.474153672530235 4.2622169416201405 47.781270919420585 13.482358466429039 2 17.89493237441338 17.796446809032634 46.99759218564354 17.31102863091045 3 18.224385867146125 17.25950771236607 46.29207103578075 18.22403538470705 4 16.40292863126093 4.183007910388651 56.09296196214088 23.321101496209533 5 27.615562822224792 5.2323523329863555 45.21188415854424 21.940200686244616 6 17.884417901241058 17.896684786608766 48.70829697078028 15.510600341369896 7 75.4644768523873 1.91223218760624 19.4230358087908 3.2002551512156483 8 76.86114937211072 13.39228447958615 5.8145036642939 3.932062484009239 9 73.18073327935903 3.7564707820314664 6.485677535127102 16.577118403482395 10 45.094472541453314 22.983937389817083 16.300587759050334 15.621002309679275 11 35.593594582943425 23.507558153798705 22.481345572180107 18.417501691077767 12 23.790747964573235 20.73068578898854 27.328868187059484 28.149698059378736 13 27.393707438288807 23.934095282155887 31.051692654939522 17.620504624615783 14 18.98388131262683 33.847491071459864 26.55885826840646 20.60976934750684 15 16.55328559762513 23.43851311330046 34.45698003301544 25.551221256058966 16 18.721720448196944 22.167313306766765 28.91480122388468 30.196165021151618 17 19.311231910725112 29.654319170337974 28.753579301909078 22.280869617027836 18 20.098064986453853 22.580882584878083 28.82753109655441 28.49352133211365 19 20.886299991938902 26.58163962694649 25.327963942366665 27.20409643874794 20 29.129646959039118 24.161207902678036 29.546020096663057 17.16312504161979 21 22.658689686353263 33.17491527087035 25.620266296557208 18.54612874621917 22 20.904174596331853 22.828323186866722 33.629841476792805 22.637660740008624 23 25.598536385334413 27.86055004713989 25.634986558998463 20.905927008527236 24 20.71105877240021 29.182569807339803 26.8574693065004 23.24890211375959 25 18.810042022844446 34.84496409307412 24.77700554813701 21.567988335944428 26 19.71989443468935 26.100777720532314 32.375464827334824 21.80386301744351 27 26.23816683665065 26.979437195299326 25.63638848875477 21.14600747929525 28 17.56057212753355 31.610011180389808 30.427132948503615 20.402283743573026 29 21.505251979349573 23.021789493237442 33.248166100637526 22.224792426775455 30 19.98275626399739 32.57559030004802 28.477048657477017 18.964604778477575 31 22.273159003368136 25.327963942366665 24.468581001748905 27.93029605251629 32 28.26325436963981 28.66105193799265 25.06194777110693 18.013745921260615 33 26.388523803014852 25.22947837698592 24.97467764377666 23.40732017622257 34 21.663670041812555 25.34864240627223 25.355652055053778 27.63203549686143 35 26.639469229394265 24.46963244906614 26.32438551666369 22.566512804875913 36 24.41075139930114 29.84638354695238 25.010777335001627 20.73208771874485 37 21.039110335376645 27.625376330518957 27.228630209483356 24.10688312462104 38 19.093932798497132 25.99493202393094 28.313373358427874 26.59776181914405 39 19.959624423018283 31.543069034526027 25.699124845349626 22.798181697106067 40 20.1268045464582 23.751844413835645 29.766473550842736 26.35487748886342 41 19.82714206104703 24.63365823055436 25.67564252193144 29.863557186467172 42 23.44482179720385 23.913416818250322 29.812737232800952 22.829024151744875 43 25.46990933019301 26.622996554757623 24.738452479838497 23.168641635210868 44 22.791873013202675 24.65854248372885 30.068589413327445 22.48099508974103 45 21.231174711991056 23.956876640695917 28.069437580830016 26.742511066483015 46 24.7973335296035 30.65424556902576 24.716372086176623 19.832048815194113 47 18.293430907644375 28.562566372611904 32.343570925378785 20.800431794364943 48 21.494387023738177 26.169121796152407 28.246080730125016 24.090410449984404 49 21.515766452521895 23.273435884495008 32.53914012638397 22.67165753659913 50 23.240490535221735 25.400864289694763 27.603295936857087 23.75534923822642 51 20.03708104205439 23.669481040652457 29.389704928834544 26.90373298845861 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 27.0 1 103.5 2 180.0 3 366.5 4 553.0 5 445.5 6 338.0 7 319.5 8 301.0 9 338.0 10 375.0 11 385.0 12 395.0 13 435.0 14 475.0 15 526.5 16 578.0 17 566.0 18 554.0 19 608.5 20 663.0 21 754.0 22 845.0 23 951.5 24 1058.0 25 1364.0 26 2184.5 27 2699.0 28 3241.5 29 3784.0 30 4372.0 31 4960.0 32 5817.0 33 6674.0 34 7480.5 35 8287.0 36 9223.5 37 10160.0 38 11187.5 39 12215.0 40 13883.5 41 15552.0 42 16226.5 43 16901.0 44 18020.5 45 19140.0 46 27800.0 47 36460.0 48 31686.5 49 26913.0 50 25677.0 51 24441.0 52 22109.5 53 19778.0 54 18728.0 55 17678.0 56 16372.0 57 15066.0 58 13043.5 59 11021.0 60 9652.5 61 8284.0 62 7213.5 63 6143.0 64 5304.5 65 4466.0 66 3531.0 67 2596.0 68 2084.0 69 1572.0 70 1306.5 71 1041.0 72 830.0 73 619.0 74 505.0 75 306.0 76 221.0 77 198.5 78 176.0 79 104.0 80 32.0 81 27.0 82 22.0 83 17.5 84 13.0 85 7.5 86 2.0 87 2.0 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 285321.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.23670254636298 #Duplication Level Percentage of deduplicated Percentage of total 1 75.95099998424318 26.762627945435963 2 8.091999998321231 5.702707938920299 3 3.0449999993682835 3.2188727769424696 4 1.7790000202241072 2.5074437817044233 5 1.2629999998894992 2.225197765608138 6 1.0699999997793475 2.262196303009999 7 0.8129999998313453 2.0053207414975183 8 0.7829999998375587 2.207227047046265 9 0.6869999998574748 2.178685317989632 >10 6.374999998677441 39.35375886371569 >50 0.0879999999817435 2.0831938541087993 >100 0.044999999990664286 3.2287390536534044 >500 0.004999999998962699 1.4260293517554652 >1k 0.003999999999170159 4.837999258611944 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTATCTGTCGTATGC 4769 1.671450751960073 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTATCTGTCGTATGCCG 4033 1.413495676799114 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTATCTGTCGTATGCCGTCTTC 2936 1.029016441131217 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGTATCTGT 1992 0.698161018642161 No Hit GCTGTCTCTTATACACATCTGACGCGGTATCTGTCGTATGCCGTCTTCTGC 933 0.3270001156592049 TruSeq Adapter, Index 13 (95% over 21bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGTATCTGTCGTA 892 0.3126303356570319 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGTATCTGTCGTATGCCGTC 838 0.29370428394685283 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGTATCTGTCGTATGCCGTCT 759 0.26601617125973903 No Hit GAACTGTCTCTTATACACATCTGACGCGGTATCTGTCGTATGCCGTCTTCT 625 0.21905152442336875 No Hit CCTGTCTCTTATACACATCTGACGCGGTATCTGTCGTATGCCGTCTTCTGC 487 0.17068494783068894 TruSeq Adapter, Index 13 (95% over 21bp) GAATGATACGGCGACCACCGATGAATGATACGGCGACCACCCGGGAACTGT 446 0.15631516782851596 No Hit GAATGCTGTCTCTTATACACATCTGACGCGGTATCTGTCGTATGCCGTCTT 385 0.13493573904479517 No Hit CTGTCTCTTATACACATCTGACGCGGTATCTGTCGTATGCCGTCTTCTGCT 384 0.13458525660571777 TruSeq Adapter, Index 16 (95% over 22bp) GAATGATCCGGCTGTCTCTTATACACATCTGACGCGGTATCTGTCGTATGC 357 0.12512223075062823 No Hit TCTGTCTCTTATACACATCTGACGCGGTATCTGTCGTATGCCGTCTTCTGC 325 0.11390679270015175 TruSeq Adapter, Index 13 (95% over 21bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 324 0.11355631026107438 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGACCACCTGTCGAATGC 317 0.11110293318753264 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGACCACCGGTCGAATGC 287 0.10058846001521093 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.14509972977803948 0.0 2 0.0 0.0 0.0 0.8344986874432656 0.0 3 0.0 0.0 0.0 1.0160485908853536 0.0 4 0.0 0.0 0.0 1.5154860665706344 0.0 5 0.0 0.0 0.0 3.087750288271806 0.0 6 0.0 0.0 0.0 3.4708275941833935 0.0 7 0.0 0.0 0.0 4.004261866459181 0.0 8 0.0 0.0 0.0 4.663519334363752 0.0 9 0.0 0.0 0.0 4.826844150973815 0.0 10 0.0 0.0 0.0 6.784989538099193 0.0 11 0.0 0.0 0.0 7.531166650894957 0.0 12 0.0 0.0 0.0 10.197637047395741 0.0 13 0.0 0.0 0.0 10.508164488418307 0.0 14 0.0 0.0 0.0 10.679900883566228 0.0 15 0.0 0.0 0.0 11.171978228030884 0.0 16 0.0 0.0 0.0 11.613586101268396 0.0 17 0.0 0.0 0.0 12.14351554915341 0.0 18 0.0 0.0 0.0 12.690969118992292 0.0 19 0.0 0.0 0.0 13.948500110401968 0.0 20 0.0 0.0 0.0 14.424104780229987 0.0 21 0.0 0.0 0.0 15.021677338856936 0.0 22 0.0 0.0 0.0 15.690047350177519 0.0 23 0.0 0.0 0.0 16.36122122101072 0.0 24 0.0 0.0 0.0 16.892202116212967 0.0 25 0.0 0.0 0.0 17.382877530921313 0.0 26 0.0 0.0 0.0 17.80065259830156 0.0 27 0.0 0.0 0.0 18.25242446227232 0.0 28 0.0 0.0 0.0 18.710505010146466 0.0 29 0.0 0.0 0.0 19.165080733629843 0.0 30 0.0 0.0 0.0 19.685897638098844 0.0 31 0.0 0.0 0.0 20.18743800841859 0.0 32 0.0 0.0 0.0 20.67320666897985 0.0 33 0.0 0.0 0.0 21.163882083688197 0.0 34 0.0 0.0 0.0 21.635981929125442 0.0 35 0.0 0.0 0.0 22.155046421399057 0.0 36 0.0 0.0 0.0 22.627847231714455 0.0 37 0.0 0.0 0.0 23.148313653744378 0.0 38 0.0 0.0 0.0 23.676490689434004 0.0 39 0.0 0.0 0.0 24.162259349995267 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATGT 20 7.024362E-4 45.000004 45 CCGATCG 40 6.7848305E-9 45.000004 40 GCGCGAT 20 7.024362E-4 45.000004 42 CGCGCGA 20 7.024362E-4 45.000004 41 CGCGATA 20 7.024362E-4 45.000004 43 AGGCGAC 40 6.7848305E-9 45.000004 31 TACGAAT 40 6.7848305E-9 45.000004 12 CGAATAC 20 7.024362E-4 45.000004 45 GCGATAG 20 7.024362E-4 45.000004 9 TACTCCC 20 7.024362E-4 45.000004 25 GAACCGA 20 7.024362E-4 45.000004 9 AACTAGC 20 7.024362E-4 45.000004 44 GACGAGG 20 7.024362E-4 45.000004 44 ACGAGGA 20 7.024362E-4 45.000004 45 CGATCGA 40 6.7848305E-9 45.000004 41 ACAGTTC 25 3.8834107E-5 45.0 29 GGTCGAA 105 0.0 45.0 42 TACGGAG 55 1.8189894E-12 45.0 29 GTGGCGT 50 2.1827873E-11 45.0 34 CGTTCAG 50 2.1827873E-11 45.0 38 >>END_MODULE