SRR2934089.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934089.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	763197
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGC	15538	2.0359094702940395	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGCCG	12628	1.6546186633333202	No Hit
GAATCTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGCCGTCTTC	8316	1.0896269246341377	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCAACCGATT	5978	0.7832840013784123	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCAACCGATTCGTA	3122	0.40906869392830425	No Hit
GCTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGCCGTCTTCTGC	2551	0.3342518379920256	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGCCGTC	2194	0.2874749245607622	No Hit
GAACTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGCCGTCTTCT	2170	0.28433025811160156	No Hit
GAATGACTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGCCGTCT	1977	0.259041898749602	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1747	0.22890551194514655	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCAACCGATTCGT	1011	0.13246907417088905	No Hit
GAATGATCCGGCTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGC	925	0.12120068606139699	No Hit
CTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGCCGTCTTCTGCT	851	0.11150463117648524	No Hit
CCTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGCCGTCTTCTGC	822	0.10770482588374955	No Hit
GAATGATACGGCCTGTCTCTTATACACATCTGACGCCAACCGATTCGTATG	778	0.10193960406028849	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CAATCGA	55	1.8189894E-12	45.000004	41
ACGCGAT	20	7.0317957E-4	45.0	41
CCTCGTA	105	0.0	45.0	40
CCGTCGA	20	7.0317957E-4	45.0	14
CGATCGA	625	0.0	44.999996	41
ATCGAAT	620	0.0	44.274193	43
CGATCAA	200	0.0	43.875	41
TCGAATG	510	0.0	43.67647	44
TCGAATA	165	0.0	43.636364	44
TACGGCT	1880	0.0	43.085106	7
CGTTTGG	410	0.0	42.80488	2
GATGAAT	5225	0.0	42.717705	20
CCGATCG	660	0.0	42.613636	40
CGGCGAA	560	0.0	42.589283	31
CCGATGA	4740	0.0	42.246838	18
ACACGAC	80	0.0	42.1875	26
TCGTAAG	80	0.0	42.1875	42
TGAATGA	5220	0.0	42.068966	22
CGATGAA	4790	0.0	42.04071	19
CCGCGTA	75	0.0	42.0	40