##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934089.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 763197 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.533353773665254 31.0 28.0 31.0 25.0 33.0 2 28.82869298490429 31.0 28.0 31.0 16.0 34.0 3 28.926798716451977 31.0 28.0 33.0 16.0 34.0 4 33.504454288997465 35.0 32.0 37.0 28.0 37.0 5 34.27249583004126 35.0 35.0 37.0 32.0 37.0 6 33.11748735909601 35.0 32.0 37.0 28.0 37.0 7 34.18600308963479 35.0 33.0 36.0 32.0 37.0 8 33.318516713247035 35.0 33.0 37.0 28.0 37.0 9 35.41723041364156 37.0 34.0 39.0 30.0 39.0 10 35.111528216174854 37.0 34.0 39.0 30.0 39.0 11 35.293263731382595 37.0 35.0 39.0 30.0 39.0 12 35.361052257805 37.0 35.0 39.0 30.0 39.0 13 35.206034614915936 37.0 34.0 39.0 29.0 39.0 14 36.005432411290926 38.0 34.0 40.0 29.0 41.0 15 36.130190501272935 38.0 34.0 40.0 30.0 41.0 16 36.49190969042069 38.0 35.0 40.0 31.0 41.0 17 35.92620122982664 38.0 34.0 40.0 29.0 41.0 18 36.20503225248527 38.0 35.0 40.0 30.0 41.0 19 36.07442770346319 38.0 34.0 40.0 30.0 41.0 20 35.66081758707123 38.0 34.0 40.0 27.0 41.0 21 35.777681253988156 38.0 34.0 40.0 29.0 41.0 22 36.00151468100635 38.0 34.0 40.0 30.0 41.0 23 35.60467218817684 38.0 34.0 40.0 27.0 41.0 24 35.65685268678991 38.0 34.0 40.0 27.0 41.0 25 35.55201867931871 38.0 34.0 40.0 28.0 41.0 26 35.556212878195275 38.0 34.0 40.0 27.0 41.0 27 35.198758642919195 38.0 33.0 40.0 27.0 41.0 28 35.07587818086287 38.0 33.0 40.0 26.0 41.0 29 35.265708591621824 38.0 33.0 40.0 27.0 41.0 30 34.97779210348049 37.0 33.0 40.0 25.0 41.0 31 35.1364038380654 38.0 33.0 40.0 26.0 41.0 32 34.653797119223476 37.0 33.0 40.0 24.0 41.0 33 34.515853704875674 37.0 33.0 40.0 24.0 41.0 34 34.52918971117549 38.0 33.0 40.0 24.0 41.0 35 34.240521123641734 37.0 33.0 40.0 23.0 41.0 36 34.14870341471468 37.0 33.0 40.0 23.0 41.0 37 34.06545099102853 37.0 33.0 40.0 22.0 41.0 38 34.11054550790949 37.0 33.0 40.0 22.0 41.0 39 33.82904282904676 37.0 33.0 40.0 21.0 41.0 40 34.06079688468377 37.0 32.0 40.0 23.0 41.0 41 33.85327641487061 37.0 31.0 40.0 22.0 41.0 42 33.50726745519178 37.0 32.0 40.0 19.0 41.0 43 33.47987741041959 37.0 32.0 40.0 18.0 41.0 44 33.8378898239904 37.0 33.0 40.0 21.0 41.0 45 33.69470529889399 37.0 33.0 40.0 20.0 41.0 46 33.62004174544711 37.0 33.0 40.0 20.0 41.0 47 33.44771664458849 36.0 32.0 40.0 20.0 41.0 48 33.429018981992854 36.0 32.0 40.0 20.0 41.0 49 33.383364976539475 36.0 32.0 40.0 20.0 41.0 50 33.13411085211289 36.0 32.0 40.0 18.0 41.0 51 32.32437103395323 35.0 31.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 3.0 11 11.0 12 21.0 13 19.0 14 41.0 15 54.0 16 100.0 17 218.0 18 571.0 19 1370.0 20 3442.0 21 6342.0 22 9757.0 23 12908.0 24 14912.0 25 14213.0 26 13349.0 27 13628.0 28 15852.0 29 19923.0 30 25287.0 31 31641.0 32 39572.0 33 49035.0 34 62944.0 35 68916.0 36 82918.0 37 101039.0 38 117199.0 39 57909.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.34186586163206 4.0461374979199345 44.08114811772059 14.530848522727421 2 17.812570017963907 19.133591982148776 44.71899129582532 18.33484670406199 3 18.913989441782398 19.401412741402286 43.364688278386836 18.31990953842848 4 16.799856393565488 4.422056166363338 54.89434575869664 23.883741681374534 5 29.633764283664636 5.520724007038812 42.569873833361505 22.275637875935047 6 18.942291439824842 19.6858740272826 45.26852175781613 16.10331277507642 7 72.33820363549647 2.277131592498398 21.838791295039158 3.5458734769659737 8 73.26679743237985 15.741807161191671 6.66564465007069 4.325750756357795 9 69.21083285180629 4.310944618492997 7.460459095096024 19.017763434604696 10 44.543021002441044 24.52813624791502 15.789894352310085 15.138948397333845 11 35.80111032931209 22.408369005643365 23.415841519293185 18.37467914575136 12 22.73580739966221 20.02641519817295 27.429091047265647 29.808686354899194 13 28.500374084279684 21.551447398247113 32.35180431788909 17.596374199584115 14 19.994051339300338 32.379058093781815 27.393844577481307 20.23304598943654 15 16.798677143647055 21.921469817098338 33.695101002755514 27.584752036499093 16 19.297376693042555 23.12024287307209 26.21249821474665 31.369882219138702 17 19.77471085447139 30.428709756458687 29.135596707010116 20.66098268205981 18 19.969156063244483 21.76973966092634 28.608865076775718 29.652239199053454 19 20.268161431452167 25.60164675699721 25.791637021633996 28.338554789916625 20 29.229150533872645 23.60373533963053 30.209893382704596 16.95722074379223 21 22.726897511389588 33.802412745333115 25.53338128949668 17.93730845378061 22 21.54332367658678 20.688891596796108 35.160908651370484 22.606876075246625 23 26.400654090621423 27.09392201489262 26.655110017466 19.850313877019957 24 20.60306840828777 29.42700246463233 26.690225459481624 23.279703667598277 25 19.56742492436422 35.756691915717695 23.619720727413764 21.056162432504323 26 19.553929064186573 24.20213915935204 32.55253885956051 23.691392916900877 27 27.046620990386494 26.15772860742377 25.18157173049684 21.61407867169289 28 17.352924605311603 31.773447746780974 29.074537766788914 21.799089881118505 29 20.068606139699185 22.79870072864542 31.85599524107144 25.27669789058395 30 18.810477504497527 33.78498605209402 27.45293810117178 19.95159834223667 31 22.67579668159073 24.701485985924997 23.00284199230343 29.619875340180847 32 27.464337517049987 27.375369662092485 23.249960364099962 21.910332456757562 33 26.091559584222683 22.965630105988364 23.661911668939997 27.280898640848957 34 22.06127644631727 24.418990116575408 24.761889787302625 28.757843649804705 35 24.838672059769625 26.9568669688167 24.806308200897014 23.398152770516656 36 19.240641669188953 32.34525292945334 23.788615521287426 24.625489880070283 37 18.972951937704156 28.180666328615022 25.569413925893315 27.276967807787507 38 19.023266600890725 28.848514865755497 22.985808382370475 29.1424101509833 39 21.638842919980032 28.140047720313365 24.46393264124466 25.757176718461945 40 19.48972545751621 25.33762580303644 25.270539585454344 29.902109153993006 41 21.157184842183604 24.53154296990161 25.9294782343222 28.38179395359258 42 22.68785123631251 25.893052514619423 27.117900096567464 24.301196152500598 43 19.8812364304367 26.744864039035793 26.59509929939452 26.778800231132983 44 22.009651505443546 24.772372008799827 29.83541601971706 23.382560466039568 45 21.436536045084033 24.64173732339095 25.92266479034902 27.999061841175998 46 24.18798816033082 27.840256185493388 24.43943044849495 23.53232520568084 47 16.682979623871688 29.646998088304855 30.697840793399344 22.972181494424113 48 21.194527756267387 28.57807355112769 26.27984648786617 23.947552204738752 49 22.381508313056784 24.022500088443742 30.326770152398396 23.26922144610107 50 21.87429982036093 25.781678911211653 27.37628685647349 24.967734411953927 51 20.130844329838823 23.02446157414141 28.187479772588205 28.657214323431564 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 119.0 1 346.0 2 573.0 3 1797.0 4 3021.0 5 2207.5 6 1394.0 7 1347.0 8 1300.0 9 1335.5 10 1371.0 11 1400.0 12 1429.0 13 1467.5 14 1506.0 15 1449.5 16 1393.0 17 1470.0 18 1547.0 19 1619.0 20 1691.0 21 1869.5 22 2048.0 23 2316.0 24 2584.0 25 3564.5 26 5622.0 27 6699.0 28 7834.0 29 8969.0 30 10423.5 31 11878.0 32 14068.0 33 16258.0 34 18569.0 35 20880.0 36 22960.0 37 25040.0 38 26714.0 39 28388.0 40 30480.0 41 32572.0 42 34634.5 43 36697.0 44 39437.0 45 42177.0 46 70620.0 47 99063.0 48 86500.5 49 73938.0 50 69626.5 51 65315.0 52 60645.0 53 55975.0 54 52900.5 55 49826.0 56 46706.0 57 43586.0 58 39166.5 59 34747.0 60 30053.0 61 25359.0 62 22330.0 63 19301.0 64 17214.5 65 15128.0 66 12651.0 67 10174.0 68 8083.5 69 5993.0 70 5000.5 71 4008.0 72 3473.0 73 2938.0 74 2507.5 75 1547.5 76 1018.0 77 730.5 78 443.0 79 298.0 80 153.0 81 107.0 82 61.0 83 37.0 84 13.0 85 7.0 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 763197.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.917479868959642 #Duplication Level Percentage of deduplicated Percentage of total 1 74.82112042167131 23.132804844100278 2 8.34308865236611 5.158945509089497 3 3.008869783705807 2.790800128981358 4 1.677105550428248 2.0740750837394337 5 1.1617737276507447 1.7959557918464053 6 0.93787173461352 1.7397978284747861 7 0.8252999180058814 1.7861335520560617 8 0.7294719771592333 1.8042748135032625 9 0.6658305585117 1.8527222600031277 >10 7.6396901416474705 42.995929678530054 >50 0.11495986769994362 2.415971357541348 >100 0.06372307268921024 3.4701383720972654 >500 0.006458419529311849 1.363801120996489 >1k 0.0030139291136788626 1.966429493348964 >5k 8.611226039082465E-4 1.90279875290618 >10k+ 8.611226039082465E-4 3.7494214127854675 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGC 15538 2.0359094702940395 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGCCG 12628 1.6546186633333202 No Hit GAATCTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGCCGTCTTC 8316 1.0896269246341377 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCAACCGATT 5978 0.7832840013784123 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCAACCGATTCGTA 3122 0.40906869392830425 No Hit GCTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGCCGTCTTCTGC 2551 0.3342518379920256 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGCCGTC 2194 0.2874749245607622 No Hit GAACTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGCCGTCTTCT 2170 0.28433025811160156 No Hit GAATGACTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGCCGTCT 1977 0.259041898749602 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1747 0.22890551194514655 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCAACCGATTCGT 1011 0.13246907417088905 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGC 925 0.12120068606139699 No Hit CTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGCCGTCTTCTGCT 851 0.11150463117648524 No Hit CCTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGCCGTCTTCTGC 822 0.10770482588374955 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCAACCGATTCGTATG 778 0.10193960406028849 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12342815812955239 0.0 2 0.0 0.0 0.0 0.7083361176734185 0.0 3 0.0 0.0 0.0 0.886926966431996 0.0 4 0.0 0.0 0.0 1.4483809553758729 0.0 5 0.0 0.0 0.0 3.1293362002209126 0.0 6 0.0 0.0 0.0 3.4840283701324823 0.0 7 0.0 0.0 0.0 4.0533440251992605 0.0 8 0.0 0.0 0.0 4.754735671130783 0.0 9 0.0 0.0 0.0 4.935422964188801 0.0 10 0.0 0.0 0.0 7.21674744528608 0.0 11 0.0 0.0 0.0 7.865727983731592 0.0 12 0.0 0.0 0.0 10.93518449364974 0.0 13 0.0 0.0 0.0 11.285683774962427 0.0 14 0.0 0.0 0.0 11.476722261748932 0.0 15 0.0 0.0 0.0 12.106310690424621 0.0 16 0.0 0.0 0.0 12.531233744367444 0.0 17 0.0 0.0 0.0 12.969128547413053 0.0 18 0.0 0.0 0.0 13.394837767968166 0.0 19 0.0 0.0 0.0 14.719528509677057 0.0 20 0.0 0.0 0.0 15.15493378511708 0.0 21 0.0 0.0 0.0 15.634102335307922 0.0 22 0.0 0.0 0.0 16.169874881583652 0.0 23 0.0 0.0 0.0 16.694641095287324 0.0 24 0.0 0.0 0.0 17.104233900290488 0.0 25 0.0 0.0 0.0 17.48749012378193 0.0 26 0.0 0.0 0.0 17.830389794509152 0.0 27 0.0 0.0 0.0 18.192812602774907 0.0 28 0.0 0.0 0.0 18.564145299313285 0.0 29 0.0 0.0 0.0 18.96626952149969 0.0 30 0.0 0.0 0.0 19.4320732392816 0.0 31 0.0 0.0 0.0 19.82921840625684 0.0 32 0.0 0.0 0.0 20.21719162942202 0.0 33 0.0 0.0 0.0 20.616040157390557 0.0 34 0.0 0.0 0.0 21.012792241059646 0.0 35 0.0 0.0 0.0 21.459727960146594 0.0 36 0.0 0.0 0.0 21.863948626632443 0.0 37 0.0 0.0 0.0 22.281010014452363 0.0 38 0.0 0.0 0.0 22.71772556757954 0.0 39 0.0 0.0 0.0 23.213272588859756 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAATCGA 55 1.8189894E-12 45.000004 41 ACGCGAT 20 7.0317957E-4 45.0 41 CCTCGTA 105 0.0 45.0 40 CCGTCGA 20 7.0317957E-4 45.0 14 CGATCGA 625 0.0 44.999996 41 ATCGAAT 620 0.0 44.274193 43 CGATCAA 200 0.0 43.875 41 TCGAATG 510 0.0 43.67647 44 TCGAATA 165 0.0 43.636364 44 TACGGCT 1880 0.0 43.085106 7 CGTTTGG 410 0.0 42.80488 2 GATGAAT 5225 0.0 42.717705 20 CCGATCG 660 0.0 42.613636 40 CGGCGAA 560 0.0 42.589283 31 CCGATGA 4740 0.0 42.246838 18 ACACGAC 80 0.0 42.1875 26 TCGTAAG 80 0.0 42.1875 42 TGAATGA 5220 0.0 42.068966 22 CGATGAA 4790 0.0 42.04071 19 CCGCGTA 75 0.0 42.0 40 >>END_MODULE