##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934087.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 452452 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.736409608091023 31.0 28.0 31.0 25.0 33.0 2 29.458939290797698 31.0 30.0 33.0 25.0 34.0 3 29.555190384836404 31.0 30.0 33.0 25.0 34.0 4 33.76455181986155 35.0 33.0 37.0 28.0 37.0 5 34.3748265009327 35.0 35.0 37.0 32.0 37.0 6 33.46648705277024 35.0 33.0 37.0 28.0 37.0 7 34.43790280515944 35.0 35.0 37.0 32.0 37.0 8 34.050803179121765 35.0 35.0 37.0 29.0 37.0 9 35.82792428810128 37.0 35.0 39.0 31.0 39.0 10 35.06096779326868 37.0 34.0 39.0 30.0 39.0 11 35.270050745714464 37.0 34.0 39.0 30.0 39.0 12 35.39888430153917 37.0 35.0 39.0 30.0 39.0 13 35.35613059506865 37.0 34.0 39.0 30.0 39.0 14 36.09314137190243 38.0 34.0 40.0 30.0 41.0 15 36.213841468266246 38.0 34.0 40.0 30.0 41.0 16 36.53338254665688 38.0 35.0 40.0 31.0 41.0 17 36.14035743018044 38.0 34.0 40.0 30.0 41.0 18 36.333482888792624 38.0 35.0 40.0 30.0 41.0 19 36.320920230212266 38.0 35.0 40.0 30.0 41.0 20 36.140196087098744 38.0 34.0 40.0 29.0 41.0 21 36.04993015833724 38.0 34.0 40.0 30.0 41.0 22 36.314188024365016 38.0 35.0 40.0 30.0 41.0 23 36.19415761229921 38.0 34.0 40.0 30.0 41.0 24 36.07079646017699 38.0 34.0 40.0 30.0 41.0 25 35.75070946752363 38.0 34.0 40.0 29.0 41.0 26 35.87783234464651 38.0 34.0 40.0 29.0 41.0 27 35.74779645133628 38.0 34.0 40.0 29.0 41.0 28 35.68682202752999 38.0 34.0 40.0 29.0 41.0 29 35.745418298515645 38.0 34.0 40.0 29.0 41.0 30 35.34445421834803 38.0 34.0 40.0 27.0 41.0 31 35.59486973203787 38.0 34.0 40.0 29.0 41.0 32 35.43419854481802 38.0 34.0 40.0 27.0 41.0 33 35.46903317921017 38.0 34.0 40.0 27.0 41.0 34 35.48259925914793 38.0 34.0 40.0 27.0 41.0 35 35.41992962789423 38.0 34.0 40.0 27.0 41.0 36 35.29792110544323 38.0 34.0 40.0 27.0 41.0 37 35.122245011625544 38.0 34.0 40.0 27.0 41.0 38 35.12950324012271 38.0 34.0 40.0 27.0 41.0 39 34.99691016947654 38.0 33.0 40.0 26.0 41.0 40 35.02466559988684 38.0 33.0 40.0 26.0 41.0 41 35.142649386012216 38.0 33.0 40.0 26.0 41.0 42 35.253905386648746 38.0 34.0 40.0 27.0 41.0 43 35.25093932616056 38.0 34.0 40.0 27.0 41.0 44 35.27447331429632 38.0 34.0 40.0 27.0 41.0 45 35.35428730561474 38.0 34.0 40.0 27.0 41.0 46 35.17434998629689 38.0 34.0 40.0 27.0 41.0 47 34.99122337839152 37.0 33.0 40.0 26.0 41.0 48 35.00275388328485 37.0 33.0 40.0 26.0 41.0 49 35.10276228196582 37.0 34.0 40.0 27.0 41.0 50 34.886575813566964 37.0 33.0 40.0 26.0 41.0 51 33.85432929901956 36.0 32.0 40.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 5.0 13 4.0 14 4.0 15 8.0 16 22.0 17 63.0 18 166.0 19 397.0 20 956.0 21 1691.0 22 2459.0 23 3023.0 24 3641.0 25 4417.0 26 5119.0 27 6362.0 28 8546.0 29 11455.0 30 15254.0 31 19444.0 32 24410.0 33 30614.0 34 39547.0 35 44343.0 36 54494.0 37 67108.0 38 75828.0 39 33068.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.190269907084065 4.179669887634489 52.905943613908214 11.724116591373228 2 18.41874939220072 13.370700096363814 49.268430684359885 18.94211982707558 3 18.817465720120587 13.093322606596944 49.33340995287898 18.75580172040349 4 17.552580163199632 3.878643480413392 54.64999602167744 23.91878033470954 5 24.536083385640907 4.895104895104895 48.709697382263755 21.859114336990444 6 18.445271542616677 13.9384951331854 51.97965751063096 15.636575813566964 7 77.76626028838419 1.5639228028608558 16.866319521186778 3.803497387568184 8 79.42234756394049 9.341764430260005 6.31426096027866 4.921627045520851 9 75.03293167009981 3.5391599550891586 7.981620149761742 13.446288225049289 10 40.01993581639599 22.516863667306144 20.600638299753342 16.862562216544518 11 29.62258979958095 26.535853527003972 24.480828905607666 19.360727767807415 12 20.91426272842202 21.999460716274875 30.835094109430393 26.25118244587271 13 22.311095983662355 25.737536799483703 34.855410076649015 17.095957140204927 14 20.56836968341393 30.20519303705144 29.280675077135253 19.94576220239937 15 16.9529585458789 26.310857284308614 36.01354397814575 20.72264019166674 16 17.900462369488917 25.98551890587289 28.80835978181111 27.305658942827083 17 18.4313474136483 28.496945532343766 30.719280719280718 22.35242633472722 18 19.452671222582726 25.322465145473995 31.099210523989285 24.125653107953994 19 20.219603405444115 29.281559148815784 27.839417219948192 22.65942022579191 20 22.454536613828648 26.950483145173408 32.462449055369405 18.13253118562853 21 22.060461662231575 32.09202302122656 27.965618452344117 17.88189686419775 22 19.832822045211426 23.912812850865947 32.119208225402915 24.13515687851971 23 19.962559564329478 30.188837710961604 27.81134794409131 22.037254780617612 24 19.88918161484533 27.85113116971524 28.067507713525412 24.192179501914016 25 17.690053309522334 33.62478229734867 26.18819233863482 22.496972054494176 26 18.804867698673007 27.053035460115105 30.967041807749773 23.175055033462115 27 21.501507342215305 29.81730658721809 26.887935073775783 21.79325099679082 28 18.487706983282205 28.784931882277014 31.242209118315312 21.48515201612547 29 20.512673167540424 25.19250660843581 30.816528604139226 23.47829161988454 30 18.899021332649653 31.821497086983815 29.417706187617693 19.861775392748843 31 22.01714214988551 26.864286156321555 25.92164472695446 25.196926966838472 32 21.259492719669712 30.999089406169052 27.287093437535916 20.45432443662532 33 19.41863446288225 27.023198040897157 26.569669268784313 26.98849822743628 34 21.775569563180184 26.729907260880715 26.162112224059126 25.33241095187998 35 19.07915093755802 29.050595422276835 27.03093366810181 24.839319972063333 36 23.3620361938946 27.992361620680207 25.49662726653877 23.148974918886424 37 17.79923616206802 29.285316453458048 30.742266582974548 22.173180801499385 38 20.647494098821532 27.47296950836774 28.11944692475666 23.76008946805407 39 18.55754864604422 26.332738058401777 31.352276042541526 23.757437253012476 40 18.423611786443644 26.820966643975492 29.875876336053324 24.879545233527534 41 18.20701422471334 27.16089220513999 24.380928805707565 30.251164764439096 42 20.525271188988004 27.278252720730595 28.054246638317437 24.142229451963964 43 21.38702005958643 25.721844527154264 26.679736193010527 26.211399220248776 44 20.36193894600974 25.44446703738739 29.729120437085037 24.46447357951783 45 20.75314066464509 24.902531097221363 27.283999186654057 27.060329051479492 46 23.76672000565806 26.65011979171271 27.54612643993175 22.03703376269748 47 17.440966113532486 26.546683405090484 33.297233739711615 22.715116741665415 48 19.71325135041949 27.18719333763582 27.736643887086366 25.362911424858325 49 20.28259351268201 23.358057871332207 32.66534350605147 23.694005109934313 50 21.12069346582621 23.621953267970966 28.583584557035884 26.67376870916694 51 19.161811639687745 23.227215262613495 27.47915801013146 30.131815087567297 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 60.0 1 127.0 2 194.0 3 376.5 4 559.0 5 450.0 6 341.0 7 367.5 8 394.0 9 504.5 10 615.0 11 681.5 12 748.0 13 770.0 14 792.0 15 877.0 16 962.0 17 1008.5 18 1055.0 19 1049.0 20 1043.0 21 1275.0 22 1507.0 23 1738.0 24 1969.0 25 2645.5 26 3971.0 27 4620.0 28 5417.5 29 6215.0 30 6986.0 31 7757.0 32 8717.5 33 9678.0 34 11523.5 35 13369.0 36 15583.5 37 17798.0 38 19270.5 39 20743.0 40 22935.5 41 25128.0 42 27414.5 43 29701.0 44 32588.0 45 35475.0 46 52939.5 47 70404.0 48 64254.0 49 58104.0 50 52346.0 51 46588.0 52 38557.0 53 30526.0 54 25788.0 55 21050.0 56 18172.5 57 15295.0 58 12970.0 59 10645.0 60 8433.5 61 6222.0 62 5048.0 63 3874.0 64 3250.5 65 2627.0 66 2016.5 67 1406.0 68 1055.5 69 705.0 70 554.0 71 403.0 72 307.0 73 211.0 74 202.5 75 144.0 76 94.0 77 67.5 78 41.0 79 27.0 80 13.0 81 7.5 82 2.0 83 1.5 84 1.0 85 1.0 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 452452.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.28370029332481 #Duplication Level Percentage of deduplicated Percentage of total 1 74.01041727349764 28.333926334824927 2 11.240665251489169 8.606685191712039 3 4.022192137098834 4.619531948965782 4 1.9959504288819319 3.0564947207859596 5 1.276569530758843 2.4435902659580915 6 0.920109735377414 2.1135123207695594 7 0.744014103069059 1.9938529055131913 8 0.6057555535047071 1.855245124911303 9 0.5382365976393587 1.8545119731831656 >10 4.473340215207551 30.01755578453694 >50 0.11088629378496317 2.9159627006445894 >100 0.053108698602271825 3.775267929874463 >500 0.0017508362176573127 0.3970320832921182 >1k 0.005836120725524376 4.520624727771202 >5k 0.0011672241451048753 3.4962059872566487 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGC 8541 1.8877140558556487 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCG 7107 1.5707743583849778 No Hit GAATCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTC 4850 1.0719369126448772 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGAGTTCACT 3337 0.7375367994837022 No Hit GCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGC 2427 0.5364104921627045 TruSeq Adapter, Index 19 (95% over 21bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGAGTTCACTCGTA 1692 0.3739623208649757 No Hit TCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGC 1417 0.31318239282841054 TruSeq Adapter, Index 19 (95% over 21bp) GAATGATCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTC 1399 0.30920407026601715 No Hit CCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGC 1364 0.30146844306136344 TruSeq Adapter, Index 19 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCT 1359 0.3003633534606986 No Hit CTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGCT 1320 0.291743654575513 TruSeq Adapter, Index 13 (95% over 22bp) GAACTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCT 1068 0.23604713870200594 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGAGTTCACTCGT 644 0.14233554056562905 No Hit TCGCAGGGGAGGCTAGTATTTGGAGAAAGAAGATTAGAAAATGGAAGTGAA 606 0.1339368596005764 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGC 527 0.11647644391007224 No Hit TGTTTTGGGATAAAAAAGATATTTATGAATGTACAGTTTGCTAAAGCCAAG 457 0.10100518950076473 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.2101792013296437E-4 0.0 0.0 0.3220231096337291 0.0 2 2.2101792013296437E-4 0.0 0.0 1.649456737952313 0.0 3 2.2101792013296437E-4 0.0 0.0 2.0948078470202365 0.0 4 2.2101792013296437E-4 0.0 0.0 3.070601964407274 0.0 5 2.2101792013296437E-4 0.0 0.0 5.330731215686968 0.0 6 2.2101792013296437E-4 0.0 0.0 5.955548875902858 0.0 7 2.2101792013296437E-4 0.0 0.0 6.814203495619425 0.0 8 2.2101792013296437E-4 0.0 0.0 8.049472651242564 0.0 9 2.2101792013296437E-4 0.0 0.0 8.39381857080972 0.0 10 2.2101792013296437E-4 0.0 0.0 11.020837569510135 0.0 11 2.2101792013296437E-4 0.0 0.0 12.674051612104709 0.0 12 2.2101792013296437E-4 0.0 0.0 16.28725257043841 0.0 13 2.2101792013296437E-4 0.0 0.0 16.882011793516217 0.0 14 2.2101792013296437E-4 0.0 0.0 17.132425097026868 0.0 15 2.2101792013296437E-4 0.0 0.0 17.814928434397462 0.0 16 2.2101792013296437E-4 0.0 0.0 18.645955814097405 0.0 17 2.2101792013296437E-4 0.0 0.0 19.731374819870396 0.0 18 2.2101792013296437E-4 0.0 0.0 20.887077524245665 0.0 19 2.2101792013296437E-4 0.0 0.0 22.59112568847082 0.0 20 2.2101792013296437E-4 0.0 0.0 23.512328379585018 0.0 21 2.2101792013296437E-4 0.0 0.0 24.700741736139967 0.0 22 2.2101792013296437E-4 0.0 0.0 25.938884124724833 0.0 23 2.2101792013296437E-4 0.0 0.0 27.271401165206473 0.0 24 2.2101792013296437E-4 0.0 0.0 28.22155720385809 0.0 25 2.2101792013296437E-4 0.0 0.0 29.10142954390742 0.0 26 2.2101792013296437E-4 0.0 0.0 29.853332508199763 0.0 27 2.2101792013296437E-4 0.0 0.0 30.607887687533704 0.0 28 2.2101792013296437E-4 0.0 0.0 31.472730809013996 0.0 29 2.2101792013296437E-4 0.0 0.0 32.30972567255753 0.0 30 2.2101792013296437E-4 0.0 0.0 33.21921441390468 0.0 31 2.2101792013296437E-4 0.0 0.0 34.06814424513539 0.0 32 2.2101792013296437E-4 0.0 0.0 34.90668623411986 0.0 33 2.2101792013296437E-4 0.0 0.0 35.725999664052765 0.0 34 2.2101792013296437E-4 0.0 0.0 36.51613872852811 0.0 35 2.2101792013296437E-4 0.0 0.0 37.31533952772891 0.0 36 2.2101792013296437E-4 0.0 0.0 38.13244277846048 0.0 37 2.2101792013296437E-4 0.0 0.0 38.97032171368455 0.0 38 2.2101792013296437E-4 0.0 0.0 39.79493957370064 0.0 39 2.2101792013296437E-4 0.0 0.0 40.66287694606279 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGCG 30 2.1625729E-6 45.000004 1 CGAACAC 30 2.1625729E-6 45.000004 34 CCCCGCG 45 3.8380676E-10 45.000004 38 ACGGCGG 30 2.1625729E-6 45.000004 30 TAGGGCG 30 2.1625729E-6 45.000004 5 GTATACG 30 2.1625729E-6 45.000004 23 TATACGA 30 2.1625729E-6 45.000004 24 GCCCCGA 20 7.0287473E-4 45.0 24 TTCTACG 20 7.0287473E-4 45.0 1 AGCCGTA 25 3.8870436E-5 45.0 13 CGGCGAA 40 6.7993824E-9 45.0 31 TCGTTGT 25 3.8870436E-5 45.0 25 CTGTCGT 20 7.0287473E-4 45.0 42 CCGGCGA 25 3.8870436E-5 45.0 8 GCACGGG 20 7.0287473E-4 45.0 3 CCTCGTG 20 7.0287473E-4 45.0 1 CGCTGGA 20 7.0287473E-4 45.0 41 AGGCGAC 25 3.8870436E-5 45.0 31 TAGTTCG 20 7.0287473E-4 45.0 40 CTGCGCA 20 7.0287473E-4 45.0 1 >>END_MODULE