SRR2934085.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934085.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	319286
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC	502	0.15722581008876055	No Hit
CTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGCT	435	0.13624148882193393	No Hit
GCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC	435	0.13624148882193393	No Hit
TCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC	377	0.11807595697900942	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGC	361	0.11306477578096126	No Hit
AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC	349	0.10930638988242516	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCGCGA	20	7.025624E-4	45.000004	32
GAGTCTA	20	7.025624E-4	45.000004	9
CATTCGA	20	7.025624E-4	45.000004	33
GTGGCGT	40	6.7884685E-9	45.000004	34
ACGGGTA	20	7.025624E-4	45.000004	5
TAATTCG	20	7.025624E-4	45.000004	27
TACGAGT	20	7.025624E-4	45.000004	39
ACGTGTA	20	7.025624E-4	45.000004	25
GAACGGC	20	7.025624E-4	45.000004	10
CCGAAGA	20	7.025624E-4	45.000004	22
CGCGTCG	20	7.025624E-4	45.000004	14
TAGTGGC	20	7.025624E-4	45.000004	45
TTCGAGT	20	7.025624E-4	45.000004	15
TCGTTCA	25	3.8844562E-5	45.0	16
ACCGGTA	25	3.8844562E-5	45.0	41
TCGCAGT	25	3.8844562E-5	45.0	41
CACGCAA	25	3.8844562E-5	45.0	24
TACGGTT	35	1.2082455E-7	45.0	33
ATACTCG	25	3.8844562E-5	45.0	44
GTTACCG	25	3.8844562E-5	45.0	38