SRR2934082.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934082.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	556167
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGC	1787	0.32130637020894803	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCG	1697	0.30512418032713196	No Hit
GAATCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTC	1191	0.21414431276936602	No Hit
CCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTCTGC	1045	0.1878932047388644	No Hit
GCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTCTGC	938	0.16865437899048308	No Hit
CTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTCTGCT	877	0.15768645029280773	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCGTGTATT	784	0.14096485408159778	No Hit
TCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTCTGC	744	0.13377276968967955	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	711	0.12783930006634697	No Hit
CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG	639	0.11489354816089412	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTTTA	20	7.030142E-4	45.000004	38
CGTATTA	20	7.030142E-4	45.000004	27
GATCGAC	20	7.030142E-4	45.000004	10
CGCATCG	20	7.030142E-4	45.000004	21
TATGCGT	20	7.030142E-4	45.000004	23
TATGCGG	20	7.030142E-4	45.000004	2
TCGTAGA	20	7.030142E-4	45.000004	19
TCGTAAT	20	7.030142E-4	45.000004	32
TCGTAAA	20	7.030142E-4	45.000004	14
CGTCGTA	20	7.030142E-4	45.000004	30
TAACGAA	35	1.2104101E-7	45.0	19
CTACGAA	50	2.1827873E-11	45.0	11
ACGAACG	35	1.2104101E-7	45.0	21
CGAACAC	30	2.1634733E-6	44.999996	34
CCGATCG	30	2.1634733E-6	44.999996	40
CCGATAT	30	2.1634733E-6	44.999996	12
CGATCGA	30	2.1634733E-6	44.999996	41
CCCGATC	95	0.0	42.63158	41
CGGGTAC	65	0.0	41.538464	6
TCGGGTC	65	0.0	41.538464	5