##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934081.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 651904 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.02951814991164 31.0 30.0 31.0 26.0 34.0 2 30.343331226683684 31.0 30.0 33.0 27.0 34.0 3 30.328324415864913 31.0 30.0 33.0 26.0 34.0 4 33.99181014382486 35.0 33.0 37.0 28.0 37.0 5 34.47875914245042 35.0 35.0 37.0 32.0 37.0 6 34.14397672049872 35.0 35.0 37.0 30.0 37.0 7 34.485714154231296 35.0 35.0 37.0 32.0 37.0 8 34.69985304584724 35.0 35.0 37.0 32.0 37.0 9 36.0123791233065 37.0 35.0 39.0 31.0 39.0 10 35.59898389946986 37.0 35.0 39.0 30.0 39.0 11 35.707687021401924 37.0 35.0 39.0 30.0 39.0 12 35.85752810229727 37.0 35.0 39.0 30.0 39.0 13 36.001205698998625 37.0 35.0 39.0 31.0 39.0 14 36.8470510995484 38.0 36.0 40.0 31.0 41.0 15 37.01546546730807 39.0 36.0 40.0 31.0 41.0 16 37.100401286078935 39.0 36.0 40.0 32.0 41.0 17 36.7452124852739 38.0 35.0 40.0 31.0 41.0 18 36.737295675436876 38.0 36.0 40.0 31.0 41.0 19 36.60694519438445 38.0 35.0 40.0 31.0 41.0 20 36.440626227174555 38.0 35.0 40.0 31.0 41.0 21 36.12499693206362 38.0 34.0 40.0 30.0 41.0 22 36.24190218191636 38.0 35.0 40.0 30.0 41.0 23 36.33392800166896 38.0 35.0 40.0 30.0 41.0 24 36.16198243913214 38.0 35.0 40.0 30.0 41.0 25 35.71145751521696 38.0 34.0 40.0 29.0 41.0 26 35.793530949342234 38.0 34.0 40.0 29.0 41.0 27 35.88480052277636 38.0 34.0 40.0 30.0 41.0 28 35.72199434272531 38.0 34.0 40.0 29.0 41.0 29 35.74353892597683 38.0 34.0 40.0 29.0 41.0 30 35.19069985764775 38.0 34.0 40.0 27.0 41.0 31 35.259598038975064 38.0 34.0 40.0 27.0 41.0 32 35.04230377478893 38.0 34.0 40.0 25.0 41.0 33 34.735869085018656 38.0 33.0 40.0 24.0 41.0 34 34.43323250049087 38.0 33.0 40.0 22.0 41.0 35 34.31290496760259 38.0 33.0 40.0 21.0 41.0 36 34.0444728058119 38.0 33.0 40.0 20.0 41.0 37 34.11296755350481 38.0 33.0 40.0 21.0 41.0 38 34.031470891419595 38.0 33.0 40.0 20.0 41.0 39 33.886438800805024 37.0 33.0 40.0 19.0 41.0 40 33.82543595376006 37.0 33.0 40.0 19.0 41.0 41 33.68508093216179 37.0 33.0 40.0 18.0 41.0 42 33.83016977959945 37.0 33.0 40.0 18.0 41.0 43 33.78511099793835 37.0 33.0 40.0 18.0 41.0 44 33.70649819605341 37.0 33.0 40.0 18.0 41.0 45 33.782263952974674 37.0 33.0 40.0 19.0 41.0 46 33.69550424602395 37.0 33.0 40.0 19.0 41.0 47 33.64131681965443 37.0 33.0 40.0 19.0 41.0 48 33.57510461663067 37.0 32.0 40.0 19.0 41.0 49 33.580603892597686 37.0 32.0 40.0 19.0 41.0 50 33.43324323826821 37.0 32.0 40.0 18.0 41.0 51 32.443358224523855 36.0 31.0 39.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 3.0 11 10.0 12 13.0 13 16.0 14 46.0 15 69.0 16 145.0 17 349.0 18 694.0 19 1265.0 20 2083.0 21 3290.0 22 4568.0 23 6203.0 24 8483.0 25 11787.0 26 14853.0 27 15756.0 28 16262.0 29 17462.0 30 19901.0 31 23004.0 32 28769.0 33 35910.0 34 48031.0 35 57253.0 36 68418.0 37 89186.0 38 114259.0 39 63813.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.365569163557822 4.036637296289024 46.70641689573925 27.891376644413903 2 27.72524788925977 5.44589387394463 48.58614151776949 18.242716719026113 3 18.009093363440016 5.558793932849008 57.90423129785981 18.52788140585117 4 16.841896966424503 4.129288975063813 55.39573311407815 23.633080944433534 5 17.177682603573533 4.9361562438641275 56.23051860396623 21.655642548596113 6 19.48246981150599 6.527494845866875 57.910213773807186 16.07982156881995 7 75.60131553112114 1.5985482525034362 19.01767744944041 3.782458766935009 8 77.52414465933634 2.996606862360102 16.05221014137051 3.4270383369330455 9 72.236096112311 4.68059714313764 17.14562266836835 5.937684076182996 10 33.19062315923817 33.005933388965246 22.593050510504614 11.21039294129197 11 21.865182603573533 21.72804584724131 37.733009768309444 18.67376178087571 12 19.56484390339682 19.55717406243864 40.17401335165914 20.7039686825054 13 19.848014431572746 19.73603475358335 41.30961000392696 19.106340810916944 14 17.33583472413116 23.35420552719419 39.47605782446495 19.833901924209698 15 16.221406832907913 24.497778814058513 40.453809149813466 18.827005203220107 16 19.21954766345965 24.87406121146672 37.70723910268997 18.199152022383664 17 19.010314402120557 24.869612703710974 37.71153421362655 18.40853868054192 18 18.463147948164146 24.385799136069114 37.492943746318474 19.658109169448263 19 18.828539171411744 25.267063862163752 36.05331459846849 19.851082367956018 20 20.960601560966033 26.103383320243474 35.635921853524444 17.30009326526605 21 20.946489053602985 25.996465737286474 35.74575397604555 17.311291233064992 22 20.507160563518557 23.37031219320636 36.86892548596112 19.25360175731396 23 19.35653102297271 24.39776408796387 36.75648561751424 19.489219271549185 24 18.755522285489885 24.844609022187317 36.67687266836835 19.722996023954448 25 19.27032201060279 26.580907618299626 34.622582466129984 19.5261879049676 26 19.349167975652858 26.184223443942667 34.66998208325152 19.796626497152957 27 19.457159336344002 26.08037379736894 34.832275917926566 19.630190948360497 28 18.86642818574514 25.935720596897703 35.36962497545651 19.828226241900648 29 20.198986353818967 24.243140094247007 35.13569482623208 20.422178725701944 30 20.05816807382682 25.90841596308659 34.59128951502062 19.44212644806597 31 20.992201305713724 25.849664981346947 32.841491998821915 20.316641714117416 32 21.529396966424503 26.770966277243275 32.24784630865894 19.45179044767328 33 21.17781145690163 27.138351659139996 31.500343608874925 20.183493275083446 34 20.108482230512468 27.85041969369723 31.95761952680149 20.083478548988808 35 19.842798939721185 28.504043540153152 31.34004393284901 20.313113587276654 36 19.843412526997838 29.156440212055763 30.77753779697624 20.222609463970155 37 19.324931278225016 28.83860200274887 31.604346652267818 20.2321200667583 38 19.429701305713724 28.23912723345769 31.193243176909487 21.137928283919106 39 19.51238219124288 28.100609905752993 31.369189328490084 21.01781857451404 40 19.70029329471824 27.89337080306303 31.932309051639507 20.47402685057923 41 18.732359365796192 28.28545307284508 31.827078833693307 21.15510872766542 42 19.496582318869034 27.519849548399765 32.04582269782053 20.937745434910664 43 20.213252258001177 27.474597486746514 31.15688813076772 21.155262124484587 44 20.203741655213037 27.312150255252305 31.24064279403102 21.243465295503633 45 20.10986280188494 26.674172884351073 30.73903519536619 22.476929118397802 46 20.44181351855488 27.49960116827018 30.791650304339292 21.26693500883566 47 19.074127478892596 27.57093068918123 32.26027145101119 21.09467038091498 48 19.258970645984686 26.802259228352643 32.315340909090914 21.623429216571765 49 19.30575667582957 26.204318427253092 33.05471357745926 21.43521131945808 50 18.912600628313374 26.17808757117612 33.092602591792655 21.81670920871785 51 18.63602616336148 25.404660808953466 33.09060843314353 22.868704594541526 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 336.0 1 453.5 2 571.0 3 10651.5 4 20732.0 5 14302.0 6 7872.0 7 7538.0 8 7204.0 9 7265.5 10 7327.0 11 7279.5 12 7232.0 13 7103.5 14 6975.0 15 6505.5 16 6036.0 17 5771.0 18 5506.0 19 5307.0 20 5108.0 21 5208.5 22 5309.0 23 5631.5 24 5954.0 25 6601.0 26 8287.5 27 9327.0 28 10514.5 29 11702.0 30 13252.5 31 14803.0 32 16435.5 33 18068.0 34 19876.5 35 21685.0 36 23416.0 37 25147.0 38 26639.0 39 28131.0 40 29827.5 41 31524.0 42 33129.0 43 34734.0 44 37197.0 45 39660.0 46 48225.0 47 56790.0 48 54575.5 49 52361.0 50 49938.0 51 47515.0 52 42327.0 53 37139.0 54 33650.0 55 30161.0 56 27982.5 57 25804.0 58 23754.0 59 21704.0 60 19679.0 61 17654.0 62 15321.0 63 12988.0 64 10915.0 65 8842.0 66 7103.0 67 5364.0 68 4239.0 69 3114.0 70 2470.5 71 1827.0 72 1481.0 73 1135.0 74 932.5 75 524.0 76 318.0 77 241.0 78 164.0 79 110.0 80 56.0 81 43.5 82 31.0 83 21.5 84 12.0 85 8.0 86 4.0 87 2.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 651904.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.66819182253387 #Duplication Level Percentage of deduplicated Percentage of total 1 69.80307642823415 38.16007971981698 2 13.917387760845346 15.21676847556957 3 7.309376419583501 11.987711766266901 4 4.019523131322043 8.789602463129018 5 2.137573086871253 5.842862777388177 6 1.1492616691103135 3.7696834428724846 7 0.5880993277597674 2.250522880247193 8 0.33829666681103665 1.4795253659319665 9 0.19244015700660447 0.9468319875836031 >10 0.5106237527369225 4.511385471609115 >50 0.02156994857589631 0.8190712554452015 >100 0.007379176216077167 0.8262069715899492 >500 0.0022705157587630457 0.9092155593397565 >1k 0.0028381446984538073 2.502514975527463 >5k 0.0 0.0 >10k+ 2.838144698453807E-4 1.9880168876826452 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12813 1.9654734439426664 No Hit GAATCTGTCTCTTATACACATCTGACGCGAGCAATCTCGTATGCCGTCTTC 2972 0.45589534655409386 RNA PCR Primer, Index 4 (95% over 23bp) CGTTTTCTGTCTCTTATACACATCTGACGCGAGCAATCTCGTATGCCGTCT 2042 0.31323630473198505 RNA PCR Primer, Index 4 (95% over 21bp) CGTTTCTGTCTCTTATACACATCTGACGCGAGCAATCTCGTATGCCGTCTT 2041 0.3130829079128215 RNA PCR Primer, Index 4 (95% over 22bp) GAATGATACCTGTCTCTTATACACATCTGACGCGAGCAATCTCGTATGCCG 1570 0.2408330060867858 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGAGCAATCTCGTATGC 1560 0.2392990378951502 No Hit CGTTCTGTCTCTTATACACATCTGACGCGAGCAATCTCGTATGCCGTCTTC 1388 0.21291478499901825 TruSeq Adapter, Index 4 (95% over 23bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGAGCAATCTCGTATGCC 1278 0.19604113489102692 No Hit CGCTGTCTCTTATACACATCTGACGCGAGCAATCTCGTATGCCGTCTTCTG 1116 0.17119085018653052 TruSeq Adapter, Index 4 (96% over 25bp) CCTGTCTCTTATACACATCTGACGCGAGCAATCTCGTATGCCGTCTTCTGC 1106 0.16965688199489495 RNA PCR Primer, Index 4 (96% over 26bp) CGTTTTTTCTGTCTCTTATACACATCTGACGCGAGCAATCTCGTATGCCGT 1056 0.16198704103671707 No Hit GAACTGTCTCTTATACACATCTGACGCGAGCAATCTCGTATGCCGTCTTCT 972 0.1491017082269782 TruSeq Adapter, Index 4 (95% over 24bp) CGTTTTTCTGTCTCTTATACACATCTGACGCGAGCAATCTCGTATGCCGTC 911 0.1397445022580012 No Hit CGTCTGTCTCTTATACACATCTGACGCGAGCAATCTCGTATGCCGTCTTCT 802 0.12302424896917337 TruSeq Adapter, Index 4 (95% over 24bp) CTGTCTCTTATACACATCTGACGCGAGCAATCTCGTATGCCGTCTTCTGCT 722 0.11075250343608875 TruSeq Adapter, Index 4 (96% over 27bp) GCTGTCTCTTATACACATCTGACGCGAGCAATCTCGTATGCCGTCTTCTGC 683 0.10477002748871 RNA PCR Primer, Index 48 (96% over 25bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12624558217160808 0.0 2 0.0 0.0 0.0 0.48657471038680544 0.0 3 0.0 0.0 0.0 0.758700667582957 0.0 4 0.0 0.0 0.0 1.270432456312586 0.0 5 0.0 0.0 0.0 2.4856420577262908 0.0 6 0.0 0.0 0.0 3.615256234046731 0.0 7 0.0 0.0 0.0 4.653906096603181 0.0 8 0.0 0.0 0.0 5.7017597683094445 0.0 9 0.0 0.0 0.0 6.477947673277047 0.0 10 0.0 0.0 0.0 7.368109414883173 0.0 11 0.0 0.0 0.0 8.10656170233654 0.0 12 0.0 0.0 0.0 8.95852763597094 0.0 13 0.0 0.0 0.0 9.269002797957981 0.0 14 0.0 0.0 0.0 9.467191488317297 0.0 15 0.0 0.0 0.0 9.650040496760258 0.0 16 0.0 0.0 0.0 9.838871981150598 0.0 17 0.0 0.0 0.0 10.066512860789318 0.0 18 0.0 0.0 0.0 10.313941930100137 0.0 19 0.0 0.0 0.0 10.610304584724132 0.0 20 0.0 0.0 0.0 10.821838798350678 0.0 21 0.0 0.0 0.0 11.044877773414491 0.0 22 0.0 0.0 0.0 11.293840810916945 0.0 23 0.0 0.0 0.0 11.536054388376202 0.0 24 0.0 0.0 0.0 11.752343903396818 0.0 25 0.0 0.0 0.0 11.950379196936971 0.0 26 0.0 0.0 0.0 12.147187315923818 0.0 27 0.0 0.0 0.0 12.342308069899863 0.0 28 0.0 0.0 0.0 12.547553013940703 0.0 29 0.0 0.0 0.0 12.75433192617318 0.0 30 0.0 0.0 0.0 12.986881504025133 0.0 31 0.0 0.0 0.0 13.218664097781268 0.0 32 0.0 0.0 0.0 13.445998183781661 0.0 33 0.0 0.0 0.0 13.668270174749656 0.0 34 0.0 0.0 0.0 13.922755497742 0.0 35 0.0 0.0 0.0 14.178774788925978 0.0 36 0.0 0.0 0.0 14.429885381896721 0.0 37 0.0 0.0 0.0 14.687131847634008 0.0 38 0.0 0.0 0.0 14.973063518554879 0.0 39 0.0 0.0 0.0 15.268659189083055 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGCGG 35 1.2108467E-7 45.0 2 CGTTTTT 7280 0.0 43.98008 1 CATACGA 80 0.0 42.1875 18 CGCTCGA 45 1.9261279E-8 40.0 41 CGATGAA 390 0.0 39.807693 19 GGCGATC 280 0.0 39.375 8 TTTCGCG 195 0.0 39.23077 1 CGTTTTC 290 0.0 38.793102 1 CTTCGCG 70 0.0 38.571426 1 ACACGCG 70 0.0 38.571426 36 GGATCGA 35 6.2441286E-6 38.571426 8 GGCGATA 70 0.0 38.571426 8 GGACCGA 310 0.0 38.46774 8 CTTGTCG 100 0.0 38.25 1 GTTTTTT 8460 0.0 38.031918 2 TTGGGAC 1735 0.0 37.73775 5 GACCGAT 305 0.0 37.62295 9 TTGGGAT 2870 0.0 37.552265 5 ACATACG 90 0.0 37.5 17 CCTCGCG 30 1.13938004E-4 37.499996 1 >>END_MODULE