##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934080.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 568022 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.588304678339924 31.0 28.0 31.0 25.0 33.0 2 29.038322459341362 31.0 28.0 33.0 16.0 34.0 3 29.116727873216178 31.0 28.0 33.0 16.0 34.0 4 33.50566879451852 35.0 32.0 37.0 28.0 37.0 5 34.23213889602867 35.0 35.0 37.0 32.0 37.0 6 33.41441176574147 35.0 33.0 37.0 28.0 37.0 7 34.13858618152114 35.0 33.0 37.0 31.0 37.0 8 33.5647686181169 35.0 35.0 37.0 28.0 37.0 9 35.4176299509526 37.0 34.0 39.0 30.0 39.0 10 35.269017749312525 37.0 34.0 39.0 30.0 39.0 11 35.387720898134226 37.0 35.0 39.0 30.0 39.0 12 35.4910109115492 37.0 35.0 39.0 30.0 39.0 13 35.42520008027858 37.0 35.0 39.0 30.0 39.0 14 36.346322853692286 38.0 35.0 40.0 30.0 41.0 15 36.406468411434766 38.0 35.0 40.0 30.0 41.0 16 36.66114516691255 38.0 35.0 40.0 31.0 41.0 17 36.16562914816679 38.0 34.0 40.0 29.0 41.0 18 36.236059518821456 38.0 35.0 40.0 30.0 41.0 19 36.06469819830922 38.0 35.0 40.0 30.0 41.0 20 35.5285693159772 37.0 34.0 40.0 27.0 41.0 21 35.55000862642644 37.0 34.0 40.0 29.0 41.0 22 35.59760713493491 37.0 34.0 40.0 29.0 41.0 23 35.402612926964096 37.0 33.0 40.0 27.0 41.0 24 35.32628665791114 37.0 33.0 40.0 27.0 41.0 25 35.1816038815398 37.0 33.0 40.0 27.0 41.0 26 35.143885272049324 37.0 33.0 40.0 27.0 41.0 27 34.94627320772787 37.0 33.0 40.0 26.0 41.0 28 34.714877240670255 37.0 33.0 40.0 25.0 41.0 29 34.88395519891835 37.0 33.0 40.0 25.0 41.0 30 34.42528106305742 37.0 33.0 40.0 24.0 41.0 31 34.57052367689984 37.0 33.0 40.0 24.0 41.0 32 33.94882064427082 37.0 33.0 40.0 22.0 41.0 33 33.54101777748045 37.0 32.0 40.0 20.0 41.0 34 33.464971427163036 37.0 32.0 40.0 18.0 41.0 35 33.05207544778195 37.0 31.0 40.0 15.0 41.0 36 32.70188302565746 36.0 31.0 40.0 14.0 41.0 37 32.76829242529339 37.0 31.0 40.0 12.0 41.0 38 32.710181999992955 36.0 31.0 40.0 15.0 41.0 39 32.37936734844777 36.0 31.0 40.0 11.0 41.0 40 32.42117206727909 36.0 30.0 40.0 13.0 41.0 41 32.48518895394896 36.0 30.0 40.0 16.0 41.0 42 32.156277397706425 36.0 30.0 40.0 10.0 41.0 43 32.06508550725148 36.0 30.0 40.0 10.0 41.0 44 32.36965469647303 36.0 31.0 40.0 11.0 41.0 45 32.30781378186056 36.0 31.0 40.0 10.0 41.0 46 32.16455700659481 36.0 31.0 40.0 10.0 41.0 47 31.975337222854044 35.0 30.0 40.0 10.0 41.0 48 31.982314065300287 35.0 30.0 39.0 10.0 41.0 49 32.01331990662334 36.0 31.0 40.0 10.0 41.0 50 31.810877043494795 35.0 30.0 39.0 10.0 41.0 51 31.074224237793608 35.0 28.0 39.0 9.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 4.0 11 14.0 12 20.0 13 24.0 14 41.0 15 74.0 16 175.0 17 419.0 18 754.0 19 1750.0 20 3520.0 21 5961.0 22 8566.0 23 10886.0 24 12775.0 25 14920.0 26 15711.0 27 15526.0 28 15593.0 29 16555.0 30 19482.0 31 23189.0 32 28000.0 33 34325.0 34 43054.0 35 49189.0 36 55824.0 37 67992.0 38 80852.0 39 42821.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.04521655851358 3.8686881846125676 41.548918879902544 26.537176376971317 2 25.49883631267803 17.391579903595282 40.70018414779709 16.409399635929596 3 15.129343581762678 17.371686307924694 49.68997679667337 17.80899331363926 4 14.695381516913079 4.078363161990205 59.26407779980353 21.96217752129319 5 25.659745573234837 4.339620648496009 48.51695885018538 21.483674928083772 6 17.483829851660676 15.795691011967847 51.382516874346415 15.337962262025062 7 65.93300963695069 1.9705222685036847 28.201724581090172 3.894743513455465 8 66.03987169511039 12.248117150392062 17.129442169493437 4.582568985004102 9 61.65377397354328 4.063575002376669 17.25390917957403 17.028741844506023 10 39.3361524729676 22.418497875082302 24.33321244599681 13.91213720595329 11 29.227213030481213 19.836555626366582 32.3147694983645 18.621461844787703 12 19.83426698261687 17.08067645267261 36.41249810746767 26.67255845724285 13 25.044100404561796 17.972015168426577 39.139857259049826 17.844027167961805 14 16.57770297629317 28.011767149863914 35.172933442718765 20.237596431124146 15 14.56387252606413 20.90042287094514 39.59265662245476 24.943047980535965 16 16.615201523884636 22.511804120262948 33.59007221551278 27.282922140339632 17 17.13032241708948 28.650298756034097 34.76009732017422 19.459281506702204 18 16.717662344064138 22.414096637102084 34.25025791254564 26.617983106288136 19 17.38665051705744 24.292192908021168 31.77341722679755 26.547739348123837 20 24.9578361401495 23.30138621391425 34.95516018745753 16.785617458478722 21 20.00538711528779 30.298298305347327 32.467404431518496 17.228910147846385 22 19.147497808183488 20.34234589505336 39.24002943547961 21.270126861283543 23 24.433032523388178 23.330082285545277 33.664365112618874 18.572520078447667 24 19.55100330620997 27.037685160081825 32.75260465263669 20.65870688107151 25 17.786282925661332 32.10069328300664 30.323649436113392 19.789374355218637 26 18.08820785110436 22.4746576717099 37.44414829003102 21.992986187154724 27 25.130012569935673 22.943829640401255 31.196326902831228 20.72983088683185 28 17.361123336772167 28.13517786282926 33.16385632950836 21.33984247089021 29 19.031833274063327 19.937432000873205 37.393622078018105 23.63711264704536 30 18.08750365302752 28.11862920802363 34.22789962360613 19.565967515342717 31 21.097422282939746 21.181750002640744 29.7171588424392 28.00366887198031 32 25.75199552130023 23.141181151434274 29.878244152515222 21.228579174750273 33 24.343951466668546 21.369242740598075 31.083127061979994 23.203678730753385 34 19.195911425965896 23.03379094471693 28.96120220695677 28.809095422360404 35 23.41053691582368 24.619468964230258 30.59969508223273 21.370299037713327 36 19.31175200960526 28.943245155997477 29.997957825577178 21.74704500882008 37 17.865329159786064 24.13568488544458 32.670037428127785 25.328948526641575 38 19.922467791740463 23.75964311241466 29.824020900598917 26.493868195245955 39 19.70064539753742 26.923957170672967 29.153800380971163 24.221597050818456 40 18.261088478967363 25.094098468017084 31.743136709493648 24.901676343521906 41 17.989796169866658 25.11170341993796 30.168725859209676 26.729774550985702 42 21.706729668921273 25.423663167975892 31.407058177324114 21.46254898577872 43 20.263475710447835 26.588406787061064 29.959050881832045 23.18906662065906 44 20.35343701476351 23.22762146536578 33.06650094538592 23.352440574484792 45 21.5525102900944 22.744365535137725 29.497449042466666 26.205675132301216 46 23.155441162490185 26.546859100527797 28.014759991690465 22.282939745291554 47 17.206551858906874 28.115108217639456 34.221209741876194 20.457130181577472 48 19.499596846601012 24.669290978166337 31.327659844160966 24.503452331071685 49 20.178971941227626 23.494512536486262 34.0687508582414 22.257764664044704 50 19.399600719690437 24.73442930027358 33.17318695402643 22.692783026009554 51 18.73853477506153 22.061469450126932 33.00329916798997 26.19669660682157 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 389.0 1 513.5 2 638.0 3 8820.5 4 17003.0 5 11783.5 6 6564.0 7 6302.5 8 6041.0 9 6022.5 10 6004.0 11 6004.0 12 6004.0 13 5735.5 14 5467.0 15 5131.5 16 4796.0 17 4513.0 18 4230.0 19 4055.5 20 3881.0 21 3893.5 22 3906.0 23 4020.0 24 4134.0 25 4398.0 26 5180.0 27 5698.0 28 6212.5 29 6727.0 30 7840.5 31 8954.0 32 10009.0 33 11064.0 34 12642.0 35 14220.0 36 14848.5 37 15477.0 38 16417.5 39 17358.0 40 18793.0 41 20228.0 42 21185.5 43 22143.0 44 24709.5 45 27276.0 46 48148.5 47 69021.0 48 56807.5 49 44594.0 50 42923.5 51 41253.0 52 38684.5 53 36116.0 54 34848.5 55 33581.0 56 31691.5 57 29802.0 58 27355.0 59 24908.0 60 22164.5 61 19421.0 62 17083.5 63 14746.0 64 12913.0 65 11080.0 66 9367.5 67 7655.0 68 6282.0 69 4909.0 70 4148.0 71 3387.0 72 2807.0 73 2227.0 74 1733.0 75 951.5 76 664.0 77 484.0 78 304.0 79 231.5 80 159.0 81 111.0 82 63.0 83 43.0 84 23.0 85 13.5 86 4.0 87 2.0 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 568022.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.09609707149506 #Duplication Level Percentage of deduplicated Percentage of total 1 70.23239703324231 33.07671788241361 2 11.788459367816955 11.10380853420165 3 6.628308339190883 9.36502358887002 4 4.231887694575585 7.972215746375885 5 2.620028072239849 6.169654821012498 6 1.5647961898966734 4.42174759538876 7 0.9815732176397424 3.235978727851873 8 0.560988009108932 2.113627658635121 9 0.358250529183222 1.5184981528494745 >10 0.9585524949255827 7.061357434818333 >50 0.04288209612099662 1.4237140841714089 >100 0.023528229472345286 2.264967165349636 >500 0.0030359005770768067 0.9609980626595901 >1k 0.003794875721346008 3.095675552041428 >5k 7.589751442692017E-4 2.3872142687268263 >10k+ 7.589751442692017E-4 3.828800724633884 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTC 10883 1.915946917548968 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10540 1.8555619324603625 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCG 7231 1.2730140733985655 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGC 6126 1.0784793546728824 No Hit GAACTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTCT 3049 0.5367749840675186 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTGCTCATT 2647 0.4660030773455958 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTC 1944 0.3422402653418353 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTT 1550 0.2728767547735827 No Hit GCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTCTGC 1549 0.27270070525437395 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCT 1483 0.2610814369865956 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTT 1386 0.24400463362334557 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCT 1319 0.23220931583635843 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTGCTCATTCGTA 1292 0.22745597881772187 No Hit CGTTCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTC 1102 0.19400657016805686 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCC 868 0.1528109826732063 No Hit CGCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTCTG 785 0.138198872578879 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGT 706 0.12429096056138672 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCTGCTCATTCGT 659 0.11601663315857484 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTC 614 0.10809440479418052 No Hit CGTCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTCT 608 0.10703810767892794 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGACCCCCGATCGAATGC 575 0.10122847354503875 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05985683653097943 0.0 2 0.0 0.0 0.0 0.49593149561108546 0.0 3 0.0 0.0 0.0 0.7415205749073099 0.0 4 0.0 0.0 0.0 1.6351479344109912 0.0 5 0.0 0.0 0.0 4.385041424451869 0.0 6 0.0 0.0 0.0 5.512462545464788 0.0 7 0.0 0.0 0.0 6.575625591966508 0.0 8 0.0 0.0 0.0 7.622063934143396 0.0 9 0.0 0.0 0.0 8.219752051857146 0.0 10 0.0 0.0 0.0 10.171613071324701 0.0 11 0.0 0.0 0.0 10.82510888662763 0.0 12 0.0 0.0 0.0 12.588244821503393 0.0 13 0.0 0.0 0.0 12.899324321945278 0.0 14 0.0 0.0 0.0 13.110583744995793 0.0 15 1.7604951920876304E-4 0.0 0.0 13.485041072352832 0.0 16 1.7604951920876304E-4 0.0 0.0 13.766720303086853 0.0 17 1.7604951920876304E-4 0.0 0.0 13.998577519884794 0.0 18 1.7604951920876304E-4 0.0 0.0 14.18254926745795 0.0 19 1.7604951920876304E-4 0.0 0.0 14.943611338997433 0.0 20 1.7604951920876304E-4 0.0 0.0 15.16754632743098 0.0 21 1.7604951920876304E-4 0.0 0.0 15.359440303368531 0.0 22 1.7604951920876304E-4 0.0 0.0 15.592705916320142 0.0 23 1.7604951920876304E-4 0.0 0.0 15.797275457640724 0.0 24 3.520990384175261E-4 0.0 0.0 15.987408938386189 0.0 25 3.520990384175261E-4 0.0 0.0 16.150078694135086 0.0 26 3.520990384175261E-4 0.0 0.0 16.311516103249524 0.0 27 3.520990384175261E-4 0.0 0.0 16.50675502005204 0.0 28 3.520990384175261E-4 0.0 0.0 16.67629070705008 0.0 29 3.520990384175261E-4 0.0 0.0 16.83825626472214 0.0 30 3.520990384175261E-4 0.0 0.0 17.016418378161408 0.0 31 3.520990384175261E-4 0.0 0.0 17.198629630542477 0.0 32 3.520990384175261E-4 0.0 0.0 17.381545081000382 0.0 33 3.520990384175261E-4 0.0 0.0 17.551784966075257 0.0 34 3.520990384175261E-4 0.0 0.0 17.74684783335857 0.0 35 3.520990384175261E-4 0.0 0.0 17.941910700641877 0.0 36 3.520990384175261E-4 0.0 0.0 18.16038815397995 0.0 37 3.520990384175261E-4 0.0 0.0 18.35967620972427 0.0 38 3.520990384175261E-4 0.0 0.0 18.60051195200186 0.0 39 3.520990384175261E-4 0.0 0.0 18.829904475530878 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGGGA 65 0.0 45.000004 4 ATCGTAA 20 7.0302683E-4 45.000004 14 CGTACAC 20 7.0302683E-4 45.000004 34 CGTAAGC 80 0.0 45.000004 43 ATACGTC 30 2.163555E-6 45.000004 28 CAATCGA 60 0.0 45.000004 41 TACGTCG 20 7.0302683E-4 45.000004 29 AGCGCGA 25 3.888306E-5 45.0 24 TGTCGCG 25 3.888306E-5 45.0 1 CGATCGA 230 0.0 44.021736 41 CGTTTTT 5975 0.0 43.832638 1 CCGATCA 155 0.0 43.548386 40 TACGGCT 790 0.0 42.72152 7 ATGAATG 3230 0.0 42.701237 21 ACCGAAT 95 0.0 42.63158 39 GATGAAT 3275 0.0 42.251907 20 TGAATGA 3205 0.0 42.19189 22 CGATGAA 3050 0.0 42.122948 19 ACCCGTC 75 0.0 42.0 39 CGCCCAC 70 0.0 41.785717 34 >>END_MODULE